EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000015536 (Gene tree)
Gene ID: 100929986
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 2996 bases
Position: chrGL841597.1:1829719-1832714
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018303	PseudoU_synth_2	PF00849.22	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018453	RPUSD3-201	921	-	ENSSHAP00000018303	307 (aa)	-	G3WS98

Gene Model

Click here to download ENSSHAG00000015536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015536	RPUSD3	99	59.355	ENSG00000156990	RPUSD3	95	57.426	Homo_sapiens
ENSSHAG00000015536	RPUSD3	99	56.958	ENSAMEG00000016227	RPUSD3	88	58.576	Ailuropoda_melanoleuca
ENSSHAG00000015536	RPUSD3	91	52.669	ENSACAG00000009836	RPUSD3	80	52.669	Anolis_carolinensis
ENSSHAG00000015536	RPUSD3	61	56.614	ENSANAG00000038118	-	90	56.614	Aotus_nancymaae
ENSSHAG00000015536	RPUSD3	76	42.449	ENSANAG00000007127	-	95	40.000	Aotus_nancymaae
ENSSHAG00000015536	RPUSD3	66	56.650	ENSANAG00000019945	-	81	56.650	Aotus_nancymaae
ENSSHAG00000015536	RPUSD3	99	57.792	ENSBTAG00000007968	RPUSD3	90	58.117	Bos_taurus
ENSSHAG00000015536	RPUSD3	99	58.117	ENSCAFG00000029733	RPUSD3	88	58.117	Canis_familiaris
ENSSHAG00000015536	RPUSD3	99	58.117	ENSCAFG00020008582	RPUSD3	94	58.117	Canis_lupus_dingo
ENSSHAG00000015536	RPUSD3	97	58.472	ENSCHIG00000026027	RPUSD3	90	58.472	Capra_hircus
ENSSHAG00000015536	RPUSD3	99	54.574	ENSTSYG00000009994	RPUSD3	89	54.574	Carlito_syrichta
ENSSHAG00000015536	RPUSD3	84	63.462	ENSCAPG00000017559	RPUSD3	98	63.462	Cavia_aperea
ENSSHAG00000015536	RPUSD3	84	63.218	ENSCPOG00000037956	RPUSD3	86	56.536	Cavia_porcellus
ENSSHAG00000015536	RPUSD3	99	60.390	ENSCCAG00000029530	RPUSD3	95	58.911	Cebus_capucinus
ENSSHAG00000015536	RPUSD3	99	59.355	ENSCATG00000036939	RPUSD3	95	57.426	Cercocebus_atys
ENSSHAG00000015536	RPUSD3	99	59.355	ENSCSAG00000010506	RPUSD3	88	59.355	Chlorocebus_sabaeus
ENSSHAG00000015536	RPUSD3	79	50.820	ENSCPBG00000008825	RPUSD3	92	54.918	Chrysemys_picta_bellii
ENSSHAG00000015536	RPUSD3	96	61.953	ENSCANG00000040711	RPUSD3	89	60.847	Colobus_angolensis_palliatus
ENSSHAG00000015536	RPUSD3	96	57.191	ENSCGRG00001004923	Rpusd3	83	57.191	Cricetulus_griseus_chok1gshd
ENSSHAG00000015536	RPUSD3	96	57.191	ENSCGRG00000018315	Rpusd3	87	57.191	Cricetulus_griseus_crigri
ENSSHAG00000015536	RPUSD3	97	58.278	ENSDNOG00000039160	RPUSD3	80	58.609	Dasypus_novemcinctus
ENSSHAG00000015536	RPUSD3	84	60.227	ENSDORG00000026827	Rpusd3	92	60.227	Dipodomys_ordii
ENSSHAG00000015536	RPUSD3	93	56.055	ENSETEG00000006538	RPUSD3	82	54.671	Echinops_telfairi
ENSSHAG00000015536	RPUSD3	66	35.437	ENSEBUG00000015605	RPUSD3	67	35.437	Eptatretus_burgeri
ENSSHAG00000015536	RPUSD3	86	58.491	ENSEASG00005014160	RPUSD3	86	58.442	Equus_asinus_asinus
ENSSHAG00000015536	RPUSD3	86	58.868	ENSECAG00000019988	RPUSD3	86	58.766	Equus_caballus
ENSSHAG00000015536	RPUSD3	68	59.434	ENSEEUG00000007353	RPUSD3	57	58.209	Erinaceus_europaeus
ENSSHAG00000015536	RPUSD3	99	58.632	ENSFCAG00000014199	RPUSD3	87	58.632	Felis_catus
ENSSHAG00000015536	RPUSD3	87	47.778	ENSFALG00000012968	RPUSD3	99	47.778	Ficedula_albicollis
ENSSHAG00000015536	RPUSD3	84	65.267	ENSFDAG00000008350	RPUSD3	87	61.837	Fukomys_damarensis
ENSSHAG00000015536	RPUSD3	84	51.923	ENSGAGG00000007493	RPUSD3	82	55.385	Gopherus_agassizii
ENSSHAG00000015536	RPUSD3	99	59.677	ENSGGOG00000013120	RPUSD3	95	57.921	Gorilla_gorilla
ENSSHAG00000015536	RPUSD3	89	62.816	ENSHGLG00000011722	RPUSD3	71	62.816	Heterocephalus_glaber_female
ENSSHAG00000015536	RPUSD3	89	62.816	ENSHGLG00100016038	RPUSD3	71	62.816	Heterocephalus_glaber_male
ENSSHAG00000015536	RPUSD3	99	55.519	ENSSTOG00000002125	RPUSD3	88	55.519	Ictidomys_tridecemlineatus
ENSSHAG00000015536	RPUSD3	99	55.195	ENSJJAG00000012679	Rpusd3	90	55.195	Jaculus_jaculus
ENSSHAG00000015536	RPUSD3	97	57.333	ENSLAFG00000017501	RPUSD3	87	57.333	Loxodonta_africana
ENSSHAG00000015536	RPUSD3	99	59.355	ENSMFAG00000032407	RPUSD3	88	59.355	Macaca_fascicularis
ENSSHAG00000015536	RPUSD3	99	59.032	ENSMMUG00000010628	RPUSD3	97	59.032	Macaca_mulatta
ENSSHAG00000015536	RPUSD3	99	58.710	ENSMNEG00000040308	RPUSD3	88	58.710	Macaca_nemestrina
ENSSHAG00000015536	RPUSD3	99	59.355	ENSMLEG00000033940	RPUSD3	95	57.426	Mandrillus_leucophaeus
ENSSHAG00000015536	RPUSD3	96	57.912	ENSMAUG00000015473	Rpusd3	86	57.912	Mesocricetus_auratus
ENSSHAG00000015536	RPUSD3	99	59.871	ENSMICG00000002315	RPUSD3	94	57.921	Microcebus_murinus
ENSSHAG00000015536	RPUSD3	96	56.711	ENSMOCG00000022613	Rpusd3	87	56.711	Microtus_ochrogaster
ENSSHAG00000015536	RPUSD3	99	82.085	ENSMODG00000005210	RPUSD3	81	82.085	Monodelphis_domestica
ENSSHAG00000015536	RPUSD3	97	56.146	MGP_CAROLIEiJ_G0028725	Rpusd3	89	58.824	Mus_caroli
ENSSHAG00000015536	RPUSD3	97	56.478	ENSMUSG00000051169	Rpusd3	88	58.824	Mus_musculus
ENSSHAG00000015536	RPUSD3	97	56.478	MGP_PahariEiJ_G0022476	Rpusd3	92	58.130	Mus_pahari
ENSSHAG00000015536	RPUSD3	97	56.478	MGP_SPRETEiJ_G0029753	Rpusd3	89	58.824	Mus_spretus
ENSSHAG00000015536	RPUSD3	96	58.863	ENSMPUG00000017132	RPUSD3	85	58.863	Mustela_putorius_furo
ENSSHAG00000015536	RPUSD3	99	59.091	ENSMLUG00000006135	RPUSD3	89	59.091	Myotis_lucifugus
ENSSHAG00000015536	RPUSD3	97	57.285	ENSNGAG00000023704	Rpusd3	90	57.285	Nannospalax_galili
ENSSHAG00000015536	RPUSD3	66	57.843	ENSNLEG00000004214	RPUSD3	95	57.921	Nomascus_leucogenys
ENSSHAG00000015536	RPUSD3	84	84.109	ENSMEUG00000013098	-	100	84.109	Notamacropus_eugenii
ENSSHAG00000015536	RPUSD3	99	47.573	ENSOPRG00000002300	RPUSD3	88	47.573	Ochotona_princeps
ENSSHAG00000015536	RPUSD3	84	63.846	ENSODEG00000018137	RPUSD3	90	64.231	Octodon_degus
ENSSHAG00000015536	RPUSD3	92	45.263	ENSOANG00000012081	-	99	45.263	Ornithorhynchus_anatinus
ENSSHAG00000015536	RPUSD3	94	52.013	ENSOCUG00000027885	RPUSD3	86	52.013	Oryctolagus_cuniculus
ENSSHAG00000015536	RPUSD3	99	58.117	ENSOGAG00000012592	RPUSD3	98	58.117	Otolemur_garnettii
ENSSHAG00000015536	RPUSD3	99	58.766	ENSOARG00000005928	RPUSD3	88	58.766	Ovis_aries
ENSSHAG00000015536	RPUSD3	99	59.740	ENSPPAG00000038083	RPUSD3	95	57.921	Pan_paniscus
ENSSHAG00000015536	RPUSD3	96	60.201	ENSPPRG00000024433	RPUSD3	87	58.958	Panthera_pardus
ENSSHAG00000015536	RPUSD3	96	60.535	ENSPTIG00000006828	RPUSD3	87	60.535	Panthera_tigris_altaica
ENSSHAG00000015536	RPUSD3	99	59.740	ENSPTRG00000051760	RPUSD3	95	57.921	Pan_troglodytes
ENSSHAG00000015536	RPUSD3	99	59.355	ENSPANG00000023885	RPUSD3	95	57.426	Papio_anubis
ENSSHAG00000015536	RPUSD3	96	57.191	ENSPEMG00000017245	Rpusd3	87	57.191	Peromyscus_maniculatus_bairdii
ENSSHAG00000015536	RPUSD3	99	82.680	ENSPCIG00000021901	RPUSD3	89	82.680	Phascolarctos_cinereus
ENSSHAG00000015536	RPUSD3	99	60.390	ENSPPYG00000013676	RPUSD3	87	60.390	Pongo_abelii
ENSSHAG00000015536	RPUSD3	99	59.740	ENSPCOG00000018314	RPUSD3	88	59.740	Propithecus_coquereli
ENSSHAG00000015536	RPUSD3	99	58.521	ENSPVAG00000011107	RPUSD3	88	58.576	Pteropus_vampyrus
ENSSHAG00000015536	RPUSD3	96	54.667	ENSRNOG00000009084	Rpusd3	89	54.667	Rattus_norvegicus
ENSSHAG00000015536	RPUSD3	99	59.677	ENSRBIG00000041230	RPUSD3	95	58.416	Rhinopithecus_bieti
ENSSHAG00000015536	RPUSD3	99	59.677	ENSRROG00000043328	RPUSD3	95	58.416	Rhinopithecus_roxellana
ENSSHAG00000015536	RPUSD3	99	60.000	ENSSBOG00000036106	RPUSD3	86	61.000	Saimiri_boliviensis_boliviensis
ENSSHAG00000015536	RPUSD3	99	58.252	ENSSSCG00000011555	RPUSD3	88	58.252	Sus_scrofa
ENSSHAG00000015536	RPUSD3	76	50.000	ENSTGUG00000008744	RPUSD3	94	49.770	Taeniopygia_guttata
ENSSHAG00000015536	RPUSD3	80	58.871	ENSTBEG00000000176	RPUSD3	86	58.871	Tupaia_belangeri
ENSSHAG00000015536	RPUSD3	99	56.818	ENSTTRG00000007544	RPUSD3	88	57.143	Tursiops_truncatus
ENSSHAG00000015536	RPUSD3	99	57.792	ENSUAMG00000011354	RPUSD3	96	59.416	Ursus_americanus
ENSSHAG00000015536	RPUSD3	99	57.792	ENSUMAG00000018830	RPUSD3	88	59.416	Ursus_maritimus
ENSSHAG00000015536	RPUSD3	99	58.576	ENSVVUG00000023735	RPUSD3	90	58.576	Vulpes_vulpes
ENSSHAG00000015536	RPUSD3	90	46.786	ENSXETG00000023546	rpusd3	99	46.786	Xenopus_tropicalis