EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000015558 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 990 bases
Position: chrGL841442.1:1838737-1839726
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018330	RRM_1	PF00076.22	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018480	-	729	-	ENSSHAP00000018330	243 (aa)	-	G3WSC5

Gene Model

Click here to download ENSSHAG00000015558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000015558	-	100	94.262	ENSSHAG00000001216	-	100	94.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015558	-	99	79.918	ENSG00000184209	SNRNP35	89	83.636	Homo_sapiens
ENSSHAG00000015558	-	100	78.455	ENSAMEG00000019650	SNRNP35	89	83.182	Ailuropoda_melanoleuca
ENSSHAG00000015558	-	70	78.824	ENSACIG00000003238	snrnp35	87	76.087	Amphilophus_citrinellus
ENSSHAG00000015558	-	70	76.471	ENSAOCG00000007701	snrnp35	86	73.370	Amphiprion_ocellaris
ENSSHAG00000015558	-	70	76.471	ENSAPEG00000023725	snrnp35	80	76.471	Amphiprion_percula
ENSSHAG00000015558	-	70	78.824	ENSATEG00000021269	snrnp35	100	69.378	Anabas_testudineus
ENSSHAG00000015558	-	91	83.333	ENSAPLG00000015654	SNRNP35	89	84.018	Anas_platyrhynchos
ENSSHAG00000015558	-	89	81.818	ENSACAG00000015421	SNRNP35	83	81.818	Anolis_carolinensis
ENSSHAG00000015558	-	99	79.184	ENSANAG00000025109	SNRNP35	87	82.353	Aotus_nancymaae
ENSSHAG00000015558	-	79	72.021	ENSACLG00000020890	snrnp35	96	71.707	Astatotilapia_calliptera
ENSSHAG00000015558	-	79	72.021	ENSACLG00000020994	SNRNP35	96	71.707	Astatotilapia_calliptera
ENSSHAG00000015558	-	69	77.976	ENSAMXG00000026163	snrnp35	80	77.976	Astyanax_mexicanus
ENSSHAG00000015558	-	100	80.000	ENSBTAG00000008060	SNRNP35	89	83.105	Bos_taurus
ENSSHAG00000015558	-	99	79.918	ENSCJAG00000007131	SNRNP35	88	82.727	Callithrix_jacchus
ENSSHAG00000015558	-	100	78.862	ENSCAFG00000007484	SNRNP35	89	83.182	Canis_familiaris
ENSSHAG00000015558	-	100	78.862	ENSCAFG00020015272	-	89	83.182	Canis_lupus_dingo
ENSSHAG00000015558	-	100	80.000	ENSCHIG00000006364	SNRNP35	89	83.105	Capra_hircus
ENSSHAG00000015558	-	100	80.488	ENSTSYG00000034104	SNRNP35	89	85.000	Carlito_syrichta
ENSSHAG00000015558	-	100	76.423	ENSCPOG00000002548	SNRNP35	89	81.364	Cavia_porcellus
ENSSHAG00000015558	-	99	78.776	ENSCCAG00000001685	SNRNP35	88	81.900	Cebus_capucinus
ENSSHAG00000015558	-	99	79.918	ENSCATG00000021946	SNRNP35	89	83.182	Cercocebus_atys
ENSSHAG00000015558	-	100	75.610	ENSCLAG00000010232	SNRNP35	89	81.364	Chinchilla_lanigera
ENSSHAG00000015558	-	99	79.508	ENSCSAG00000018950	SNRNP35	89	83.182	Chlorocebus_sabaeus
ENSSHAG00000015558	-	100	80.894	ENSCHOG00000006263	SNRNP35	89	84.091	Choloepus_hoffmanni
ENSSHAG00000015558	-	97	82.773	ENSCPBG00000025965	SNRNP35	91	83.333	Chrysemys_picta_bellii
ENSSHAG00000015558	-	69	61.538	ENSCSAVG00000000748	-	94	61.538	Ciona_savignyi
ENSSHAG00000015558	-	99	79.918	ENSCANG00000025364	SNRNP35	88	83.636	Colobus_angolensis_palliatus
ENSSHAG00000015558	-	100	77.642	ENSCGRG00001012630	Snrnp35	89	81.818	Cricetulus_griseus_chok1gshd
ENSSHAG00000015558	-	100	77.642	ENSCGRG00000002063	Snrnp35	89	81.818	Cricetulus_griseus_crigri
ENSSHAG00000015558	-	68	79.518	ENSDARG00000099913	snrnp35	98	69.951	Danio_rerio
ENSSHAG00000015558	-	100	81.301	ENSDNOG00000038603	SNRNP35	89	84.545	Dasypus_novemcinctus
ENSSHAG00000015558	-	100	78.455	ENSDORG00000001859	Snrnp35	89	83.182	Dipodomys_ordii
ENSSHAG00000015558	-	69	60.119	ENSEBUG00000003535	snrnp35	81	52.752	Eptatretus_burgeri
ENSSHAG00000015558	-	99	79.508	ENSEASG00005012617	SNRNP35	89	83.636	Equus_asinus_asinus
ENSSHAG00000015558	-	99	79.508	ENSECAG00000006080	SNRNP35	89	83.636	Equus_caballus
ENSSHAG00000015558	-	74	86.667	ENSEEUG00000011544	SNRNP35	80	84.264	Erinaceus_europaeus
ENSSHAG00000015558	-	77	74.468	ENSELUG00000000071	snrnp35	77	74.468	Esox_lucius
ENSSHAG00000015558	-	100	79.675	ENSFCAG00000001159	SNRNP35	88	84.091	Felis_catus
ENSSHAG00000015558	-	100	81.967	ENSFALG00000014650	SNRNP35	90	83.945	Ficedula_albicollis
ENSSHAG00000015558	-	100	67.886	ENSFDAG00000018743	SNRNP35	89	73.182	Fukomys_damarensis
ENSSHAG00000015558	-	98	61.983	ENSGMOG00000002299	snrnp35	95	63.801	Gadus_morhua
ENSSHAG00000015558	-	97	80.932	ENSGALG00000003318	SNRNP35	83	83.486	Gallus_gallus
ENSSHAG00000015558	-	70	79.412	ENSGACG00000020631	snrnp35	96	68.468	Gasterosteus_aculeatus
ENSSHAG00000015558	-	99	79.508	ENSGGOG00000015936	SNRNP35	88	83.182	Gorilla_gorilla
ENSSHAG00000015558	-	88	67.290	ENSHBUG00000015853	snrnp35	99	69.484	Haplochromis_burtoni
ENSSHAG00000015558	-	100	76.829	ENSHGLG00000017961	SNRNP35	89	82.727	Heterocephalus_glaber_female
ENSSHAG00000015558	-	100	76.829	ENSHGLG00100019252	SNRNP35	89	82.727	Heterocephalus_glaber_male
ENSSHAG00000015558	-	69	75.148	ENSIPUG00000016053	snrnp35	80	65.581	Ictalurus_punctatus
ENSSHAG00000015558	-	100	76.423	ENSSTOG00000025145	SNRNP35	90	80.000	Ictidomys_tridecemlineatus
ENSSHAG00000015558	-	100	79.268	ENSJJAG00000013421	Snrnp35	87	82.273	Jaculus_jaculus
ENSSHAG00000015558	-	100	73.061	ENSLACG00000017176	SNRNP35	79	75.909	Latimeria_chalumnae
ENSSHAG00000015558	-	69	79.882	ENSLOCG00000018154	snrnp35	84	69.565	Lepisosteus_oculatus
ENSSHAG00000015558	-	100	80.081	ENSLAFG00000022302	SNRNP35	89	85.000	Loxodonta_africana
ENSSHAG00000015558	-	99	79.508	ENSMFAG00000008986	SNRNP35	89	83.182	Macaca_fascicularis
ENSSHAG00000015558	-	99	79.508	ENSMMUG00000008411	SNRNP35	89	83.182	Macaca_mulatta
ENSSHAG00000015558	-	99	79.508	ENSMNEG00000018139	SNRNP35	89	83.182	Macaca_nemestrina
ENSSHAG00000015558	-	99	79.918	ENSMLEG00000040998	SNRNP35	88	83.182	Mandrillus_leucophaeus
ENSSHAG00000015558	-	69	78.571	ENSMAMG00000018927	snrnp35	94	67.265	Mastacembelus_armatus
ENSSHAG00000015558	-	67	72.727	ENSMZEG00005018947	-	95	66.332	Maylandia_zebra
ENSSHAG00000015558	-	79	72.021	ENSMZEG00005018928	snrnp35	96	71.707	Maylandia_zebra
ENSSHAG00000015558	-	100	81.148	ENSMGAG00000003241	SNRNP35	90	82.569	Meleagris_gallopavo
ENSSHAG00000015558	-	100	78.455	ENSMAUG00000001690	Snrnp35	89	82.727	Mesocricetus_auratus
ENSSHAG00000015558	-	100	80.894	ENSMICG00000026512	SNRNP35	88	83.182	Microcebus_murinus
ENSSHAG00000015558	-	100	77.236	ENSMOCG00000000548	Snrnp35	89	81.818	Microtus_ochrogaster
ENSSHAG00000015558	-	70	78.824	ENSMMOG00000018779	snrnp35	94	69.545	Mola_mola
ENSSHAG00000015558	-	73	98.324	ENSMODG00000012481	SNRNP35	100	98.324	Monodelphis_domestica
ENSSHAG00000015558	-	100	76.829	MGP_CAROLIEiJ_G0027752	Snrnp35	100	85.124	Mus_caroli
ENSSHAG00000015558	-	100	76.829	ENSMUSG00000029402	Snrnp35	100	85.124	Mus_musculus
ENSSHAG00000015558	-	91	79.018	MGP_PahariEiJ_G0024332	Snrnp35	100	85.124	Mus_pahari
ENSSHAG00000015558	-	100	76.829	MGP_SPRETEiJ_G0028751	Snrnp35	100	85.124	Mus_spretus
ENSSHAG00000015558	-	100	77.642	ENSMPUG00000019392	SNRNP35	89	82.727	Mustela_putorius_furo
ENSSHAG00000015558	-	100	79.675	ENSMLUG00000025311	SNRNP35	89	83.636	Myotis_lucifugus
ENSSHAG00000015558	-	100	78.226	ENSNGAG00000010711	Snrnp35	90	81.081	Nannospalax_galili
ENSSHAG00000015558	-	99	79.918	ENSNLEG00000029859	SNRNP35	88	83.636	Nomascus_leucogenys
ENSSHAG00000015558	-	100	80.738	ENSOPRG00000011119	SNRNP35	89	84.404	Ochotona_princeps
ENSSHAG00000015558	-	100	76.829	ENSODEG00000019870	SNRNP35	89	81.818	Octodon_degus
ENSSHAG00000015558	-	70	78.824	ENSONIG00000021361	snrnp35	94	67.713	Oreochromis_niloticus
ENSSHAG00000015558	-	96	82.716	ENSOANG00000002697	SNRNP35	93	85.398	Ornithorhynchus_anatinus
ENSSHAG00000015558	-	100	77.236	ENSOCUG00000021248	SNRNP35	89	81.818	Oryctolagus_cuniculus
ENSSHAG00000015558	-	81	70.854	ENSORLG00000005673	snrnp35	89	70.854	Oryzias_latipes
ENSSHAG00000015558	-	81	71.357	ENSORLG00015014439	snrnp35	92	71.357	Oryzias_latipes_hsok
ENSSHAG00000015558	-	100	79.675	ENSOGAG00000011301	SNRNP35	89	83.182	Otolemur_garnettii
ENSSHAG00000015558	-	100	80.000	ENSOARG00000004583	SNRNP35	89	83.105	Ovis_aries
ENSSHAG00000015558	-	99	80.328	ENSPPAG00000000480	SNRNP35	88	83.636	Pan_paniscus
ENSSHAG00000015558	-	100	80.081	ENSPPRG00000013139	SNRNP35	88	84.545	Panthera_pardus
ENSSHAG00000015558	-	100	80.081	ENSPTIG00000015832	SNRNP35	88	84.545	Panthera_tigris_altaica
ENSSHAG00000015558	-	99	80.328	ENSPTRG00000023573	SNRNP35	88	83.636	Pan_troglodytes
ENSSHAG00000015558	-	99	79.918	ENSPANG00000019739	SNRNP35	88	83.182	Papio_anubis
ENSSHAG00000015558	-	69	77.515	ENSPKIG00000005221	snrnp35	81	77.515	Paramormyrops_kingsleyae
ENSSHAG00000015558	-	100	82.520	ENSPSIG00000000450	SNRNP35	91	82.520	Pelodiscus_sinensis
ENSSHAG00000015558	-	100	97.131	ENSPCIG00000010978	SNRNP35	93	97.131	Phascolarctos_cinereus
ENSSHAG00000015558	-	76	73.514	ENSPFOG00000019881	snrnp35	99	66.968	Poecilia_formosa
ENSSHAG00000015558	-	99	79.918	ENSPPYG00000005088	SNRNP35	88	83.636	Pongo_abelii
ENSSHAG00000015558	-	100	79.098	ENSPCAG00000011478	SNRNP35	89	82.569	Procavia_capensis
ENSSHAG00000015558	-	100	79.268	ENSPCOG00000009946	SNRNP35	89	83.182	Propithecus_coquereli
ENSSHAG00000015558	-	100	79.268	ENSPVAG00000015317	SNRNP35	89	82.727	Pteropus_vampyrus
ENSSHAG00000015558	-	95	64.706	ENSPNAG00000020589	snrnp35	82	68.349	Pygocentrus_nattereri
ENSSHAG00000015558	-	100	76.423	ENSRNOG00000001060	Snrnp35	89	81.364	Rattus_norvegicus
ENSSHAG00000015558	-	99	79.508	ENSRBIG00000043111	SNRNP35	88	83.182	Rhinopithecus_bieti
ENSSHAG00000015558	-	99	79.508	ENSRROG00000032878	SNRNP35	88	83.182	Rhinopithecus_roxellana
ENSSHAG00000015558	-	99	79.184	ENSSBOG00000012231	SNRNP35	88	82.353	Saimiri_boliviensis_boliviensis
ENSSHAG00000015558	-	77	73.262	ENSSFOG00015003785	snrnp35	97	73.262	Scleropages_formosus
ENSSHAG00000015558	-	77	74.468	ENSSLDG00000017209	snrnp35	95	71.429	Seriola_lalandi_dorsalis
ENSSHAG00000015558	-	100	74.590	ENSSARG00000012656	SNRNP35	88	80.275	Sorex_araneus
ENSSHAG00000015558	-	96	81.780	ENSSPUG00000012768	SNRNP35	93	82.520	Sphenodon_punctatus
ENSSHAG00000015558	-	88	68.224	ENSSPAG00000008207	snrnp35	94	68.224	Stegastes_partitus
ENSSHAG00000015558	-	100	78.455	ENSSSCG00000022212	SNRNP35	99	83.962	Sus_scrofa
ENSSHAG00000015558	-	97	81.780	ENSTGUG00000015471	-	82	83.486	Taeniopygia_guttata
ENSSHAG00000015558	-	100	81.557	ENSTGUG00000005364	-	91	83.945	Taeniopygia_guttata
ENSSHAG00000015558	-	69	78.571	ENSTNIG00000009984	snrnp35	98	70.000	Tetraodon_nigroviridis
ENSSHAG00000015558	-	100	79.675	ENSTBEG00000002309	SNRNP35	89	83.182	Tupaia_belangeri
ENSSHAG00000015558	-	100	78.862	ENSUAMG00000012611	SNRNP35	89	83.182	Ursus_americanus
ENSSHAG00000015558	-	100	78.862	ENSUMAG00000003914	SNRNP35	87	83.182	Ursus_maritimus
ENSSHAG00000015558	-	100	78.862	ENSVVUG00000027761	-	89	83.182	Vulpes_vulpes
ENSSHAG00000015558	-	76	73.514	ENSXMAG00000019885	snrnp35	89	66.816	Xiphophorus_maculatus