EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000015609 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 1476 bases
Position: chrGL867621.1:1855634-1857109
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018391	RRM_1	PF00076.22	1.5e-32	1	2
ENSSHAP00000018391	RRM_1	PF00076.22	1.5e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018543	-	657	-	ENSSHAP00000018391	219 (aa)	-	G3WSI6

Gene Model

Click here to download ENSSHAG00000015609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000015609	-	70	30.667	ENSSHAG00000018139	PABPC4	54	40.984
ENSSHAG00000015609	-	78	33.918	ENSSHAG00000013312	HNRNPD	60	33.918
ENSSHAG00000015609	-	84	56.897	ENSSHAG00000018255	HNRNPA3	54	56.897
ENSSHAG00000015609	-	78	37.059	ENSSHAG00000015802	-	61	37.059
ENSSHAG00000015609	-	78	32.174	ENSSHAG00000011446	PABPC1L	50	32.456
ENSSHAG00000015609	-	70	30.000	ENSSHAG00000003431	-	54	42.623
ENSSHAG00000015609	-	68	38.158	ENSSHAG00000006035	CIRBP	59	34.314
ENSSHAG00000015609	-	78	40.237	ENSSHAG00000008672	MSI2	56	40.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015609	-	81	62.147	ENSAOCG00000015914	-	63	62.147	Amphiprion_ocellaris
ENSSHAG00000015609	-	81	68.790	ENSAOCG00000015951	-	94	68.790	Amphiprion_ocellaris
ENSSHAG00000015609	-	81	62.147	ENSAPEG00000002224	-	74	62.147	Amphiprion_percula
ENSSHAG00000015609	-	81	68.790	ENSAPEG00000002274	-	94	68.790	Amphiprion_percula
ENSSHAG00000015609	-	81	61.017	ENSACLG00000008978	-	82	60.674	Astatotilapia_calliptera
ENSSHAG00000015609	-	81	60.795	ENSCVAG00000008324	-	79	60.795	Cyprinodon_variegatus
ENSSHAG00000015609	-	81	46.821	FBgn0001215	Hrb98DE	51	46.821	Drosophila_melanogaster
ENSSHAG00000015609	-	81	34.194	ENSEBUG00000010003	-	81	34.194	Eptatretus_burgeri
ENSSHAG00000015609	-	80	65.217	ENSELUG00000014407	-	96	65.217	Esox_lucius
ENSSHAG00000015609	-	81	61.017	ENSHBUG00000023867	-	82	60.674	Haplochromis_burtoni
ENSSHAG00000015609	-	79	58.046	ENSHCOG00000007180	-	74	58.046	Hippocampus_comes
ENSSHAG00000015609	-	82	59.394	ENSLBEG00000006362	-	79	59.394	Labrus_bergylta
ENSSHAG00000015609	-	74	58.400	ENSLOCG00000012121	-	69	58.400	Lepisosteus_oculatus
ENSSHAG00000015609	-	81	60.674	ENSMAMG00000017728	-	67	60.674	Mastacembelus_armatus
ENSSHAG00000015609	-	81	61.017	ENSMZEG00005001063	-	80	61.017	Maylandia_zebra
ENSSHAG00000015609	-	80	66.875	ENSMMOG00000004242	-	96	66.875	Mola_mola
ENSSHAG00000015609	-	95	47.115	ENSMEUG00000003051	-	57	50.282	Notamacropus_eugenii
ENSSHAG00000015609	-	80	56.395	ENSORLG00000023176	-	68	56.069	Oryzias_latipes
ENSSHAG00000015609	-	81	54.749	ENSORLG00000023542	-	73	54.749	Oryzias_latipes
ENSSHAG00000015609	-	96	47.393	ENSORLG00000030284	-	66	47.857	Oryzias_latipes
ENSSHAG00000015609	-	82	61.272	ENSORLG00020007171	-	96	61.628	Oryzias_latipes_hni
ENSSHAG00000015609	-	80	55.414	ENSORLG00020007084	-	78	52.941	Oryzias_latipes_hni
ENSSHAG00000015609	-	79	57.485	ENSORLG00020006029	-	58	57.485	Oryzias_latipes_hni
ENSSHAG00000015609	-	97	54.335	ENSOMEG00000002509	-	71	54.335	Oryzias_melastigma
ENSSHAG00000015609	-	94	47.500	ENSOMEG00000002084	-	75	56.322	Oryzias_melastigma
ENSSHAG00000015609	-	100	49.533	ENSOMEG00000023475	-	64	54.913	Oryzias_melastigma
ENSSHAG00000015609	-	99	46.930	ENSOMEG00000021030	-	79	53.757	Oryzias_melastigma
ENSSHAG00000015609	-	81	43.407	ENSOMEG00000006327	-	63	43.407	Oryzias_melastigma
ENSSHAG00000015609	-	79	53.125	ENSOMEG00000009566	-	86	53.797	Oryzias_melastigma
ENSSHAG00000015609	-	81	55.491	ENSOMEG00000002000	-	60	55.491	Oryzias_melastigma
ENSSHAG00000015609	-	100	48.000	ENSOMEG00000012368	-	70	53.757	Oryzias_melastigma
ENSSHAG00000015609	-	99	46.903	ENSOMEG00000006903	-	66	52.601	Oryzias_melastigma
ENSSHAG00000015609	-	81	60.795	ENSPREG00000010603	-	61	60.795	Poecilia_reticulata
ENSSHAG00000015609	-	81	61.017	ENSPNYG00000020763	-	82	60.674	Pundamilia_nyererei
ENSSHAG00000015609	-	80	64.596	ENSPNAG00000018051	-	80	64.596	Pygocentrus_nattereri
ENSSHAG00000015609	-	81	62.195	ENSSDUG00000002394	-	86	62.195	Seriola_dumerili
ENSSHAG00000015609	-	82	66.667	ENSSLDG00000024685	-	97	63.372	Seriola_lalandi_dorsalis