EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000015630 (Gene tree)
Gene ID: 100919277
Gene Symbol: -
Alias: -
Full Name: pre-mRNA-splicing factor SYF2
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 750 bases
Position: chrGL864882.1:1862962-1863711
Accession: 100919277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018414	SYF2	PF08231.12	1.3e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018567	-	750	-	ENSSHAP00000018414	249 (aa)	XP_003773649	G3WSK9

Gene Model

Click here to download ENSSHAG00000015630's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015630's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000015630	-	82	97.087	ENSSHAG00000007152	-	100	97.087

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015630	-	87	92.593	ENSG00000117614	SYF2	93	91.556	Homo_sapiens
ENSSHAG00000015630	-	89	83.333	ENSAPOG00000001174	syf2	93	83.333	Acanthochromis_polyacanthus
ENSSHAG00000015630	-	78	92.308	ENSAMEG00000010134	-	100	92.308	Ailuropoda_melanoleuca
ENSSHAG00000015630	-	93	89.610	ENSAMEG00000010115	-	93	89.868	Ailuropoda_melanoleuca
ENSSHAG00000015630	-	89	80.543	ENSACIG00000023688	syf2	89	80.180	Amphilophus_citrinellus
ENSSHAG00000015630	-	82	82.439	ENSAOCG00000010912	syf2	64	82.439	Amphiprion_ocellaris
ENSSHAG00000015630	-	89	83.784	ENSAOCG00000022046	syf2	94	83.784	Amphiprion_ocellaris
ENSSHAG00000015630	-	89	83.784	ENSAPEG00000018858	syf2	86	83.784	Amphiprion_percula
ENSSHAG00000015630	-	87	82.949	ENSATEG00000007745	syf2	93	81.982	Anabas_testudineus
ENSSHAG00000015630	-	80	90.000	ENSAPLG00000016435	SYF2	99	90.000	Anas_platyrhynchos
ENSSHAG00000015630	-	67	76.048	ENSACAG00000026777	-	100	76.048	Anolis_carolinensis
ENSSHAG00000015630	-	82	86.275	ENSACAG00000013653	-	100	86.275	Anolis_carolinensis
ENSSHAG00000015630	-	87	93.519	ENSANAG00000032473	SYF2	92	92.411	Aotus_nancymaae
ENSSHAG00000015630	-	89	79.730	ENSACLG00000019916	syf2	93	79.730	Astatotilapia_calliptera
ENSSHAG00000015630	-	100	75.000	ENSAMXG00000004051	syf2	100	75.000	Astyanax_mexicanus
ENSSHAG00000015630	-	100	85.141	ENSBTAG00000001651	SYF2	96	90.749	Bos_taurus
ENSSHAG00000015630	-	84	50.711	WBGene00019402	syf-2	97	47.345	Caenorhabditis_elegans
ENSSHAG00000015630	-	87	93.519	ENSCJAG00000046570	SYF2	93	92.000	Callithrix_jacchus
ENSSHAG00000015630	-	100	84.739	ENSCAFG00000012895	-	100	84.337	Canis_familiaris
ENSSHAG00000015630	-	91	83.186	ENSCAFG00000030331	-	96	83.186	Canis_familiaris
ENSSHAG00000015630	-	100	84.739	ENSCAFG00020021091	-	100	84.337	Canis_lupus_dingo
ENSSHAG00000015630	-	73	84.066	ENSCAFG00020021094	-	95	84.066	Canis_lupus_dingo
ENSSHAG00000015630	-	92	90.435	ENSCHIG00000020874	SYF2	94	91.189	Capra_hircus
ENSSHAG00000015630	-	100	85.542	ENSTSYG00000005114	SYF2	93	91.593	Carlito_syrichta
ENSSHAG00000015630	-	80	92.929	ENSCAPG00000010006	SYF2	100	92.929	Cavia_aperea
ENSSHAG00000015630	-	100	84.739	ENSCPOG00000005326	SYF2	100	84.739	Cavia_porcellus
ENSSHAG00000015630	-	87	93.519	ENSCCAG00000022459	SYF2	93	92.478	Cebus_capucinus
ENSSHAG00000015630	-	92	90.351	ENSCATG00000026917	SYF2	93	91.111	Cercocebus_atys
ENSSHAG00000015630	-	100	86.747	ENSCLAG00000008474	SYF2	100	86.747	Chinchilla_lanigera
ENSSHAG00000015630	-	92	90.789	ENSCSAG00000000948	SYF2	93	91.556	Chlorocebus_sabaeus
ENSSHAG00000015630	-	70	73.714	ENSCHOG00000005273	-	94	73.837	Choloepus_hoffmanni
ENSSHAG00000015630	-	90	91.071	ENSCPBG00000025073	SYF2	90	91.071	Chrysemys_picta_bellii
ENSSHAG00000015630	-	85	52.336	ENSCING00000003017	-	89	52.336	Ciona_intestinalis
ENSSHAG00000015630	-	85	51.869	ENSCSAVG00000006627	-	98	51.869	Ciona_savignyi
ENSSHAG00000015630	-	100	73.092	ENSCANG00000037322	SYF2	92	78.319	Colobus_angolensis_palliatus
ENSSHAG00000015630	-	92	89.474	ENSCGRG00001020733	Syf2	93	89.868	Cricetulus_griseus_chok1gshd
ENSSHAG00000015630	-	79	91.327	ENSCGRG00000005095	Syf2	96	90.955	Cricetulus_griseus_crigri
ENSSHAG00000015630	-	88	79.358	ENSCSEG00000000117	syf2	93	78.378	Cynoglossus_semilaevis
ENSSHAG00000015630	-	89	81.448	ENSCVAG00000019543	syf2	92	81.448	Cyprinodon_variegatus
ENSSHAG00000015630	-	90	82.511	ENSDARG00000004706	syf2	94	82.511	Danio_rerio
ENSSHAG00000015630	-	97	87.552	ENSDNOG00000047605	SYF2	93	91.189	Dasypus_novemcinctus
ENSSHAG00000015630	-	92	92.105	ENSDORG00000001274	Syf2	93	92.478	Dipodomys_ordii
ENSSHAG00000015630	-	92	56.087	FBgn0033556	CG12343	98	56.637	Drosophila_melanogaster
ENSSHAG00000015630	-	88	73.853	ENSETEG00000015729	SYF2	92	74.882	Echinops_telfairi
ENSSHAG00000015630	-	79	59.391	ENSEBUG00000015402	syf2	95	59.391	Eptatretus_burgeri
ENSSHAG00000015630	-	92	80.702	ENSEASG00005004232	-	94	80.617	Equus_asinus_asinus
ENSSHAG00000015630	-	100	86.747	ENSEASG00005004224	-	92	92.478	Equus_asinus_asinus
ENSSHAG00000015630	-	96	89.496	ENSECAG00000010440	-	95	92.070	Equus_caballus
ENSSHAG00000015630	-	92	91.739	ENSECAG00000012023	-	93	92.070	Equus_caballus
ENSSHAG00000015630	-	76	75.532	ENSEEUG00000015084	SYF2	91	81.325	Erinaceus_europaeus
ENSSHAG00000015630	-	89	84.163	ENSELUG00000003465	syf2	93	84.163	Esox_lucius
ENSSHAG00000015630	-	100	85.542	ENSFCAG00000043095	-	92	90.749	Felis_catus
ENSSHAG00000015630	-	93	91.775	ENSFCAG00000010324	-	78	92.478	Felis_catus
ENSSHAG00000015630	-	82	87.255	ENSFALG00000000460	SYF2	89	86.364	Ficedula_albicollis
ENSSHAG00000015630	-	100	85.542	ENSFDAG00000008310	SYF2	93	92.000	Fukomys_damarensis
ENSSHAG00000015630	-	90	66.964	ENSFHEG00000007238	syf2	99	66.964	Fundulus_heteroclitus
ENSSHAG00000015630	-	88	81.193	ENSGMOG00000019138	syf2	96	82.326	Gadus_morhua
ENSSHAG00000015630	-	90	89.732	ENSGALG00000013639	SYF2	93	83.065	Gallus_gallus
ENSSHAG00000015630	-	89	78.829	ENSGAFG00000019435	syf2	93	78.829	Gambusia_affinis
ENSSHAG00000015630	-	89	80.631	ENSGACG00000007305	syf2	93	80.631	Gasterosteus_aculeatus
ENSSHAG00000015630	-	90	91.518	ENSGAGG00000010670	SYF2	90	91.518	Gopherus_agassizii
ENSSHAG00000015630	-	87	93.056	ENSGGOG00000012796	SYF2	93	92.000	Gorilla_gorilla
ENSSHAG00000015630	-	89	79.730	ENSHBUG00000020477	syf2	95	79.730	Haplochromis_burtoni
ENSSHAG00000015630	-	90	80.357	ENSHGLG00000004304	-	94	80.804	Heterocephalus_glaber_female
ENSSHAG00000015630	-	100	87.149	ENSHGLG00000014393	SYF2	100	86.345	Heterocephalus_glaber_female
ENSSHAG00000015630	-	100	87.149	ENSHGLG00100014722	SYF2	100	86.345	Heterocephalus_glaber_male
ENSSHAG00000015630	-	96	77.273	ENSHCOG00000012904	syf2	78	75.904	Hippocampus_comes
ENSSHAG00000015630	-	100	77.108	ENSIPUG00000019859	syf2	92	83.945	Ictalurus_punctatus
ENSSHAG00000015630	-	59	91.781	ENSSTOG00000023984	SYF2	100	91.781	Ictidomys_tridecemlineatus
ENSSHAG00000015630	-	80	93.467	ENSJJAG00000013301	Syf2	94	93.467	Jaculus_jaculus
ENSSHAG00000015630	-	89	80.631	ENSKMAG00000013856	syf2	94	80.631	Kryptolebias_marmoratus
ENSSHAG00000015630	-	88	83.562	ENSLBEG00000014425	syf2	94	82.511	Labrus_bergylta
ENSSHAG00000015630	-	88	84.404	ENSLACG00000012064	SYF2	92	84.404	Latimeria_chalumnae
ENSSHAG00000015630	-	100	76.305	ENSLOCG00000002728	syf2	89	82.511	Lepisosteus_oculatus
ENSSHAG00000015630	-	73	63.043	ENSLAFG00000030814	-	100	63.043	Loxodonta_africana
ENSSHAG00000015630	-	100	85.542	ENSLAFG00000023150	-	100	85.542	Loxodonta_africana
ENSSHAG00000015630	-	92	90.789	ENSMFAG00000041831	SYF2	93	91.556	Macaca_fascicularis
ENSSHAG00000015630	-	87	92.130	ENSMMUG00000002968	SYF2	93	91.111	Macaca_mulatta
ENSSHAG00000015630	-	92	90.789	ENSMNEG00000030180	SYF2	93	91.556	Macaca_nemestrina
ENSSHAG00000015630	-	92	90.351	ENSMLEG00000030248	SYF2	93	91.111	Mandrillus_leucophaeus
ENSSHAG00000015630	-	87	80.645	ENSMAMG00000010403	syf2	92	79.730	Mastacembelus_armatus
ENSSHAG00000015630	-	89	79.730	ENSMZEG00005006429	syf2	93	79.730	Maylandia_zebra
ENSSHAG00000015630	-	80	90.452	ENSMGAG00000002019	SYF2	100	90.452	Meleagris_gallopavo
ENSSHAG00000015630	-	92	90.351	ENSMAUG00000018974	Syf2	93	90.749	Mesocricetus_auratus
ENSSHAG00000015630	-	80	93.467	ENSMICG00000016191	SYF2	100	93.467	Microcebus_murinus
ENSSHAG00000015630	-	100	84.739	ENSMOCG00000022938	Syf2	93	90.749	Microtus_ochrogaster
ENSSHAG00000015630	-	89	79.730	ENSMMOG00000002396	syf2	93	79.730	Mola_mola
ENSSHAG00000015630	-	91	89.956	ENSMODG00000013951	-	100	89.956	Monodelphis_domestica
ENSSHAG00000015630	-	89	80.269	ENSMALG00000010706	syf2	93	80.717	Monopterus_albus
ENSSHAG00000015630	-	91	90.749	MGP_CAROLIEiJ_G0026633	Syf2	93	90.749	Mus_caroli
ENSSHAG00000015630	-	91	90.749	ENSMUSG00000028821	Syf2	93	90.749	Mus_musculus
ENSSHAG00000015630	-	91	90.749	MGP_PahariEiJ_G0028966	Syf2	93	90.749	Mus_pahari
ENSSHAG00000015630	-	91	90.749	MGP_SPRETEiJ_G0027613	Syf2	93	90.749	Mus_spretus
ENSSHAG00000015630	-	93	90.909	ENSMPUG00000015801	-	92	91.189	Mustela_putorius_furo
ENSSHAG00000015630	-	100	85.542	ENSMPUG00000015802	-	100	85.141	Mustela_putorius_furo
ENSSHAG00000015630	-	93	90.043	ENSMLUG00000001885	SYF2	93	91.150	Myotis_lucifugus
ENSSHAG00000015630	-	100	85.944	ENSNGAG00000007912	Syf2	92	91.593	Nannospalax_galili
ENSSHAG00000015630	-	89	72.444	ENSNBRG00000010720	syf2	93	72.124	Neolamprologus_brichardi
ENSSHAG00000015630	-	87	93.056	ENSNLEG00000035185	SYF2	93	92.000	Nomascus_leucogenys
ENSSHAG00000015630	-	100	83.534	ENSOPRG00000012870	SYF2	92	90.625	Ochotona_princeps
ENSSHAG00000015630	-	90	91.556	ENSODEG00000017664	-	95	91.556	Octodon_degus
ENSSHAG00000015630	-	100	75.904	ENSODEG00000014338	-	100	75.904	Octodon_degus
ENSSHAG00000015630	-	89	79.730	ENSONIG00000008213	syf2	93	79.730	Oreochromis_niloticus
ENSSHAG00000015630	-	81	93.069	ENSOANG00000009552	SYF2	100	93.069	Ornithorhynchus_anatinus
ENSSHAG00000015630	-	87	93.056	ENSOCUG00000013050	SYF2	92	92.889	Oryctolagus_cuniculus
ENSSHAG00000015630	-	89	81.081	ENSORLG00000028820	syf2	95	81.081	Oryzias_latipes
ENSSHAG00000015630	-	89	81.081	ENSORLG00020018333	syf2	94	81.081	Oryzias_latipes_hni
ENSSHAG00000015630	-	89	80.631	ENSORLG00015014665	syf2	93	80.631	Oryzias_latipes_hsok
ENSSHAG00000015630	-	89	81.982	ENSOMEG00000013911	syf2	93	81.982	Oryzias_melastigma
ENSSHAG00000015630	-	100	86.747	ENSOGAG00000009962	SYF2	100	86.747	Otolemur_garnettii
ENSSHAG00000015630	-	100	84.861	ENSOARG00000006348	-	100	84.861	Ovis_aries
ENSSHAG00000015630	-	78	65.641	ENSOARG00000006269	-	100	64.615	Ovis_aries
ENSSHAG00000015630	-	87	93.056	ENSPPAG00000036579	SYF2	93	92.000	Pan_paniscus
ENSSHAG00000015630	-	100	85.542	ENSPPRG00000001651	-	92	90.749	Panthera_pardus
ENSSHAG00000015630	-	93	91.775	ENSPPRG00000001638	-	92	92.478	Panthera_pardus
ENSSHAG00000015630	-	87	93.981	ENSPTIG00000005711	-	81	93.274	Panthera_tigris_altaica
ENSSHAG00000015630	-	100	85.542	ENSPTIG00000007036	-	92	90.749	Panthera_tigris_altaica
ENSSHAG00000015630	-	87	93.056	ENSPTRG00000000352	SYF2	93	92.000	Pan_troglodytes
ENSSHAG00000015630	-	92	90.789	ENSPANG00000008139	SYF2	93	91.556	Papio_anubis
ENSSHAG00000015630	-	89	82.805	ENSPKIG00000008130	syf2	94	82.805	Paramormyrops_kingsleyae
ENSSHAG00000015630	-	90	90.179	ENSPSIG00000011816	SYF2	87	90.179	Pelodiscus_sinensis
ENSSHAG00000015630	-	90	79.372	ENSPMGG00000008755	syf2	87	79.372	Periophthalmus_magnuspinnatus
ENSSHAG00000015630	-	100	84.337	ENSPEMG00000008283	Syf2	93	90.308	Peromyscus_maniculatus_bairdii
ENSSHAG00000015630	-	100	93.200	ENSPCIG00000014235	SYF2	100	93.600	Phascolarctos_cinereus
ENSSHAG00000015630	-	89	79.279	ENSPFOG00000004116	syf2	92	79.279	Poecilia_formosa
ENSSHAG00000015630	-	92	76.824	ENSPLAG00000006691	syf2	95	79.279	Poecilia_latipinna
ENSSHAG00000015630	-	89	76.577	ENSPMEG00000011684	syf2	95	76.577	Poecilia_mexicana
ENSSHAG00000015630	-	87	81.019	ENSPREG00000003009	syf2	94	78.924	Poecilia_reticulata
ENSSHAG00000015630	-	92	91.228	ENSPPYG00000001713	SYF2	93	92.000	Pongo_abelii
ENSSHAG00000015630	-	100	58.635	ENSPCOG00000027011	SYF2	90	61.947	Propithecus_coquereli
ENSSHAG00000015630	-	97	77.178	ENSPVAG00000005841	SYF2	93	79.736	Pteropus_vampyrus
ENSSHAG00000015630	-	89	79.730	ENSPNYG00000004979	syf2	93	79.730	Pundamilia_nyererei
ENSSHAG00000015630	-	100	76.587	ENSPNAG00000015570	syf2	93	84.234	Pygocentrus_nattereri
ENSSHAG00000015630	-	91	90.749	ENSRNOG00000060597	Syf2	93	90.749	Rattus_norvegicus
ENSSHAG00000015630	-	92	88.596	ENSRBIG00000042970	SYF2	93	88.889	Rhinopithecus_bieti
ENSSHAG00000015630	-	92	90.789	ENSRROG00000001347	SYF2	93	91.556	Rhinopithecus_roxellana
ENSSHAG00000015630	-	87	93.056	ENSSBOG00000020184	SYF2	93	92.035	Saimiri_boliviensis_boliviensis
ENSSHAG00000015630	-	100	75.904	ENSSFOG00015023647	syf2	100	75.904	Scleropages_formosus
ENSSHAG00000015630	-	89	80.180	ENSSMAG00000009867	syf2	93	80.180	Scophthalmus_maximus
ENSSHAG00000015630	-	88	81.651	ENSSDUG00000013072	syf2	92	81.651	Seriola_dumerili
ENSSHAG00000015630	-	88	81.651	ENSSLDG00000012677	syf2	92	81.651	Seriola_lalandi_dorsalis
ENSSHAG00000015630	-	100	68.273	ENSSARG00000012889	SYF2	100	67.470	Sorex_araneus
ENSSHAG00000015630	-	92	86.957	ENSSPUG00000005251	SYF2	89	88.000	Sphenodon_punctatus
ENSSHAG00000015630	-	89	80.631	ENSSPAG00000009626	syf2	93	80.631	Stegastes_partitus
ENSSHAG00000015630	-	92	90.435	ENSSSCG00000037481	SYF2	93	91.189	Sus_scrofa
ENSSHAG00000015630	-	60	59.603	ENSTGUG00000001126	SYF2	84	60.694	Taeniopygia_guttata
ENSSHAG00000015630	-	100	73.092	ENSTRUG00000001499	syf2	89	78.829	Takifugu_rubripes
ENSSHAG00000015630	-	90	77.578	ENSTNIG00000016912	syf2	100	77.578	Tetraodon_nigroviridis
ENSSHAG00000015630	-	100	65.462	ENSTBEG00000017370	SYF2	91	69.027	Tupaia_belangeri
ENSSHAG00000015630	-	87	93.519	ENSTTRG00000003550	SYF2	93	92.070	Tursiops_truncatus
ENSSHAG00000015630	-	100	84.337	ENSUAMG00000002897	SYF2	100	83.936	Ursus_americanus
ENSSHAG00000015630	-	100	84.739	ENSUMAG00000013108	SYF2	100	84.337	Ursus_maritimus
ENSSHAG00000015630	-	91	90.308	ENSVPAG00000005705	SYF2	93	90.308	Vicugna_pacos
ENSSHAG00000015630	-	82	92.195	ENSVVUG00000027181	-	100	83.936	Vulpes_vulpes
ENSSHAG00000015630	-	100	84.739	ENSVVUG00000027175	-	100	84.337	Vulpes_vulpes
ENSSHAG00000015630	-	92	83.333	ENSXETG00000022797	syf2	91	83.628	Xenopus_tropicalis
ENSSHAG00000015630	-	86	80.930	ENSXMAG00000022698	syf2	93	78.829	Xiphophorus_maculatus