EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000015670 (Gene tree)
Gene ID: 100925529
Gene Symbol: SF3B5
Alias: MGC3133|SF3b10|Ysf3
Full Name: splicing factor 3B subunit 5
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chrGL856960.1:1877851-1878111
Accession: 100925529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018457	SF3b10	PF07189.11	4.6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018611	SF3B5-201	261	-	ENSSHAP00000018457	86 (aa)	XP_023359010	G3WSQ2

Gene Model

Click here to download ENSSHAG00000015670's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015670's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015670	SF3B5	100	98.837	ENSG00000169976	SF3B5	100	98.837	Homo_sapiens
ENSSHAG00000015670	SF3B5	99	90.588	ENSAPOG00000001721	sf3b5	99	90.588	Acanthochromis_polyacanthus
ENSSHAG00000015670	SF3B5	99	92.941	ENSACIG00000008106	sf3b5	99	92.941	Amphilophus_citrinellus
ENSSHAG00000015670	SF3B5	99	90.588	ENSAOCG00000023367	sf3b5	99	90.588	Amphiprion_ocellaris
ENSSHAG00000015670	SF3B5	99	90.588	ENSAPEG00000004605	sf3b5	99	90.588	Amphiprion_percula
ENSSHAG00000015670	SF3B5	99	91.765	ENSATEG00000009720	sf3b5	99	91.765	Anabas_testudineus
ENSSHAG00000015670	SF3B5	100	95.349	ENSACAG00000007948	SF3B5	100	95.349	Anolis_carolinensis
ENSSHAG00000015670	SF3B5	100	98.837	ENSANAG00000019999	SF3B5	100	98.837	Aotus_nancymaae
ENSSHAG00000015670	SF3B5	99	92.941	ENSACLG00000022410	sf3b5	99	92.941	Astatotilapia_calliptera
ENSSHAG00000015670	SF3B5	100	98.837	ENSBTAG00000009795	SF3B5	100	98.837	Bos_taurus
ENSSHAG00000015670	SF3B5	100	98.837	ENSCJAG00000046566	SF3B5	100	98.837	Callithrix_jacchus
ENSSHAG00000015670	SF3B5	100	98.837	ENSCAFG00000032495	SF3B5	100	98.837	Canis_familiaris
ENSSHAG00000015670	SF3B5	100	98.837	ENSCAFG00020000873	SF3B5	100	98.837	Canis_lupus_dingo
ENSSHAG00000015670	SF3B5	100	98.837	ENSCHIG00000007987	SF3B5	100	98.837	Capra_hircus
ENSSHAG00000015670	SF3B5	100	98.837	ENSTSYG00000012236	SF3B5	100	98.837	Carlito_syrichta
ENSSHAG00000015670	SF3B5	100	98.837	ENSCPOG00000012435	SF3B5	100	98.837	Cavia_porcellus
ENSSHAG00000015670	SF3B5	100	98.837	ENSCCAG00000006528	SF3B5	100	98.837	Cebus_capucinus
ENSSHAG00000015670	SF3B5	100	98.837	ENSCATG00000010192	SF3B5	100	98.837	Cercocebus_atys
ENSSHAG00000015670	SF3B5	100	98.837	ENSCLAG00000017802	SF3B5	100	98.837	Chinchilla_lanigera
ENSSHAG00000015670	SF3B5	100	98.837	ENSCSAG00000000187	SF3B5	100	98.837	Chlorocebus_sabaeus
ENSSHAG00000015670	SF3B5	100	97.674	ENSCPBG00000017148	SF3B5	100	97.674	Chrysemys_picta_bellii
ENSSHAG00000015670	SF3B5	97	75.904	ENSCING00000021953	-	97	75.904	Ciona_intestinalis
ENSSHAG00000015670	SF3B5	100	98.837	ENSCANG00000002639	SF3B5	100	98.837	Colobus_angolensis_palliatus
ENSSHAG00000015670	SF3B5	100	97.674	ENSCGRG00001007249	Sf3b5	100	97.674	Cricetulus_griseus_chok1gshd
ENSSHAG00000015670	SF3B5	100	97.674	ENSCGRG00000019185	Sf3b5	100	97.674	Cricetulus_griseus_crigri
ENSSHAG00000015670	SF3B5	100	90.698	ENSCSEG00000003216	sf3b5	100	90.698	Cynoglossus_semilaevis
ENSSHAG00000015670	SF3B5	99	91.765	ENSCVAG00000005040	sf3b5	99	91.765	Cyprinodon_variegatus
ENSSHAG00000015670	SF3B5	99	94.118	ENSDARG00000016855	sf3b5	99	94.118	Danio_rerio
ENSSHAG00000015670	SF3B5	100	98.837	ENSDNOG00000048829	SF3B5	82	98.837	Dasypus_novemcinctus
ENSSHAG00000015670	SF3B5	100	98.837	ENSDORG00000005838	Sf3b5	100	98.837	Dipodomys_ordii
ENSSHAG00000015670	SF3B5	99	83.529	FBgn0040534	Sf3b5	100	83.529	Drosophila_melanogaster
ENSSHAG00000015670	SF3B5	100	98.837	ENSETEG00000004047	SF3B5	100	98.837	Echinops_telfairi
ENSSHAG00000015670	SF3B5	99	82.353	ENSEBUG00000002311	sf3b5	100	82.353	Eptatretus_burgeri
ENSSHAG00000015670	SF3B5	100	98.837	ENSEASG00005009522	SF3B5	100	98.837	Equus_asinus_asinus
ENSSHAG00000015670	SF3B5	100	98.837	ENSECAG00000005457	SF3B5	100	98.837	Equus_caballus
ENSSHAG00000015670	SF3B5	99	90.588	ENSELUG00000014290	SF3B5	99	90.588	Esox_lucius
ENSSHAG00000015670	SF3B5	100	98.837	ENSFCAG00000000936	SF3B5	100	98.837	Felis_catus
ENSSHAG00000015670	SF3B5	100	94.186	ENSFALG00000015012	SF3B5	100	94.186	Ficedula_albicollis
ENSSHAG00000015670	SF3B5	100	98.837	ENSFDAG00000003664	SF3B5	100	98.837	Fukomys_damarensis
ENSSHAG00000015670	SF3B5	99	91.765	ENSFHEG00000020301	sf3b5	99	91.765	Fundulus_heteroclitus
ENSSHAG00000015670	SF3B5	99	91.765	ENSGMOG00000019972	sf3b5	99	91.765	Gadus_morhua
ENSSHAG00000015670	SF3B5	100	96.512	ENSGALG00000030824	SF3B5	100	96.512	Gallus_gallus
ENSSHAG00000015670	SF3B5	99	91.765	ENSGAFG00000000271	sf3b5	99	91.765	Gambusia_affinis
ENSSHAG00000015670	SF3B5	99	91.765	ENSGACG00000010363	sf3b5	99	91.765	Gasterosteus_aculeatus
ENSSHAG00000015670	SF3B5	100	91.860	ENSGAGG00000000646	-	100	91.860	Gopherus_agassizii
ENSSHAG00000015670	SF3B5	100	97.674	ENSGAGG00000011434	SF3B5	100	97.674	Gopherus_agassizii
ENSSHAG00000015670	SF3B5	100	98.837	ENSGGOG00000001537	SF3B5	100	98.837	Gorilla_gorilla
ENSSHAG00000015670	SF3B5	99	92.941	ENSHBUG00000008925	sf3b5	99	92.941	Haplochromis_burtoni
ENSSHAG00000015670	SF3B5	100	98.837	ENSHGLG00000021406	SF3B5	100	98.837	Heterocephalus_glaber_female
ENSSHAG00000015670	SF3B5	100	98.837	ENSHGLG00100020370	SF3B5	100	98.837	Heterocephalus_glaber_male
ENSSHAG00000015670	SF3B5	99	90.588	ENSHCOG00000009115	-	99	90.588	Hippocampus_comes
ENSSHAG00000015670	SF3B5	99	90.588	ENSHCOG00000016802	sf3b5	99	90.588	Hippocampus_comes
ENSSHAG00000015670	SF3B5	99	90.588	ENSHCOG00000016806	sf3b5	99	90.588	Hippocampus_comes
ENSSHAG00000015670	SF3B5	99	94.118	ENSIPUG00000015166	sf3b5	99	94.118	Ictalurus_punctatus
ENSSHAG00000015670	SF3B5	100	98.837	ENSSTOG00000003347	SF3B5	100	98.837	Ictidomys_tridecemlineatus
ENSSHAG00000015670	SF3B5	100	98.837	ENSJJAG00000001857	Sf3b5	100	98.837	Jaculus_jaculus
ENSSHAG00000015670	SF3B5	99	91.765	ENSKMAG00000002249	sf3b5	99	91.765	Kryptolebias_marmoratus
ENSSHAG00000015670	SF3B5	99	91.765	ENSLBEG00000019847	sf3b5	99	91.765	Labrus_bergylta
ENSSHAG00000015670	SF3B5	100	94.186	ENSLACG00000000946	SF3B5	100	94.186	Latimeria_chalumnae
ENSSHAG00000015670	SF3B5	99	92.941	ENSLOCG00000017352	sf3b5	99	92.941	Lepisosteus_oculatus
ENSSHAG00000015670	SF3B5	100	98.837	ENSLAFG00000032489	SF3B5	100	98.837	Loxodonta_africana
ENSSHAG00000015670	SF3B5	100	98.837	ENSMFAG00000029753	SF3B5	100	98.837	Macaca_fascicularis
ENSSHAG00000015670	SF3B5	100	98.837	ENSMMUG00000047691	SF3B5	100	98.837	Macaca_mulatta
ENSSHAG00000015670	SF3B5	100	98.837	ENSMNEG00000028236	SF3B5	100	98.837	Macaca_nemestrina
ENSSHAG00000015670	SF3B5	100	98.837	ENSMLEG00000007622	SF3B5	100	98.837	Mandrillus_leucophaeus
ENSSHAG00000015670	SF3B5	99	92.941	ENSMAMG00000021639	sf3b5	99	92.941	Mastacembelus_armatus
ENSSHAG00000015670	SF3B5	99	92.941	ENSMZEG00005028115	SF3B5	99	92.941	Maylandia_zebra
ENSSHAG00000015670	SF3B5	99	92.941	ENSMZEG00005027408	sf3b5	99	92.941	Maylandia_zebra
ENSSHAG00000015670	SF3B5	99	81.176	ENSMZEG00005027407	sf3b5	99	81.176	Maylandia_zebra
ENSSHAG00000015670	SF3B5	100	96.512	ENSMGAG00000015849	SF3B5	100	96.512	Meleagris_gallopavo
ENSSHAG00000015670	SF3B5	100	97.674	ENSMAUG00000008283	Sf3b5	100	97.674	Mesocricetus_auratus
ENSSHAG00000015670	SF3B5	100	98.837	ENSMICG00000014922	SF3B5	100	98.837	Microcebus_murinus
ENSSHAG00000015670	SF3B5	100	97.674	ENSMOCG00000001713	Sf3b5	100	97.674	Microtus_ochrogaster
ENSSHAG00000015670	SF3B5	99	92.941	ENSMMOG00000007956	sf3b5	99	92.941	Mola_mola
ENSSHAG00000015670	SF3B5	100	98.837	ENSMODG00000023291	SF3B5	83	98.837	Monodelphis_domestica
ENSSHAG00000015670	SF3B5	91	90.123	ENSMALG00000020357	sf3b5	99	90.123	Monopterus_albus
ENSSHAG00000015670	SF3B5	100	97.674	MGP_CAROLIEiJ_G0015120	Sf3b5	100	97.674	Mus_caroli
ENSSHAG00000015670	SF3B5	100	97.674	ENSMUSG00000078348	Sf3b5	100	97.674	Mus_musculus
ENSSHAG00000015670	SF3B5	100	97.674	MGP_PahariEiJ_G0023739	Sf3b5	100	97.674	Mus_pahari
ENSSHAG00000015670	SF3B5	100	97.674	MGP_SPRETEiJ_G0015928	Sf3b5	100	97.674	Mus_spretus
ENSSHAG00000015670	SF3B5	100	98.837	ENSMPUG00000018379	SF3B5	100	98.837	Mustela_putorius_furo
ENSSHAG00000015670	SF3B5	100	98.837	ENSMLUG00000028504	-	100	98.837	Myotis_lucifugus
ENSSHAG00000015670	SF3B5	93	93.750	ENSMLUG00000025546	-	93	93.750	Myotis_lucifugus
ENSSHAG00000015670	SF3B5	100	94.186	ENSMLUG00000010802	-	100	94.186	Myotis_lucifugus
ENSSHAG00000015670	SF3B5	100	98.837	ENSNGAG00000010732	Sf3b5	100	98.837	Nannospalax_galili
ENSSHAG00000015670	SF3B5	99	92.941	ENSNBRG00000014383	sf3b5	99	92.941	Neolamprologus_brichardi
ENSSHAG00000015670	SF3B5	100	98.837	ENSNLEG00000019307	SF3B5	100	98.837	Nomascus_leucogenys
ENSSHAG00000015670	SF3B5	100	98.837	ENSMEUG00000005445	-	100	98.837	Notamacropus_eugenii
ENSSHAG00000015670	SF3B5	100	98.837	ENSMEUG00000005440	-	100	98.837	Notamacropus_eugenii
ENSSHAG00000015670	SF3B5	100	97.674	ENSOPRG00000015107	SF3B5	100	97.674	Ochotona_princeps
ENSSHAG00000015670	SF3B5	100	98.837	ENSODEG00000019507	SF3B5	100	98.837	Octodon_degus
ENSSHAG00000015670	SF3B5	99	92.941	ENSONIG00000020725	sf3b5	99	92.941	Oreochromis_niloticus
ENSSHAG00000015670	SF3B5	69	98.305	ENSOANG00000015301	SF3B5	97	98.305	Ornithorhynchus_anatinus
ENSSHAG00000015670	SF3B5	100	98.837	ENSOCUG00000008752	SF3B5	100	98.837	Oryctolagus_cuniculus
ENSSHAG00000015670	SF3B5	99	94.118	ENSORLG00000004925	sf3b5	99	94.118	Oryzias_latipes
ENSSHAG00000015670	SF3B5	99	94.118	ENSORLG00020011625	sf3b5	99	94.118	Oryzias_latipes_hni
ENSSHAG00000015670	SF3B5	99	94.118	ENSORLG00015017061	sf3b5	99	94.118	Oryzias_latipes_hsok
ENSSHAG00000015670	SF3B5	99	94.118	ENSOMEG00000010620	sf3b5	99	94.118	Oryzias_melastigma
ENSSHAG00000015670	SF3B5	100	98.837	ENSOGAG00000012152	SF3B5	100	98.837	Otolemur_garnettii
ENSSHAG00000015670	SF3B5	100	95.349	ENSOARG00000002617	SF3B5	100	95.349	Ovis_aries
ENSSHAG00000015670	SF3B5	92	97.468	ENSOARG00000019486	-	95	97.468	Ovis_aries
ENSSHAG00000015670	SF3B5	100	98.837	ENSPPAG00000012940	SF3B5	100	98.837	Pan_paniscus
ENSSHAG00000015670	SF3B5	100	98.837	ENSPPRG00000021262	SF3B5	100	98.837	Panthera_pardus
ENSSHAG00000015670	SF3B5	100	98.837	ENSPTIG00000001952	SF3B5	100	98.837	Panthera_tigris_altaica
ENSSHAG00000015670	SF3B5	100	98.837	ENSPTRG00000018676	SF3B5	100	98.837	Pan_troglodytes
ENSSHAG00000015670	SF3B5	100	98.837	ENSPANG00000034242	SF3B5	100	98.837	Papio_anubis
ENSSHAG00000015670	SF3B5	99	92.941	ENSPKIG00000006057	sf3b5	99	92.941	Paramormyrops_kingsleyae
ENSSHAG00000015670	SF3B5	100	97.674	ENSPSIG00000001262	SF3B5	100	97.674	Pelodiscus_sinensis
ENSSHAG00000015670	SF3B5	99	90.588	ENSPMGG00000014804	sf3b5	99	90.588	Periophthalmus_magnuspinnatus
ENSSHAG00000015670	SF3B5	100	97.674	ENSPEMG00000012931	Sf3b5	100	97.674	Peromyscus_maniculatus_bairdii
ENSSHAG00000015670	SF3B5	99	91.765	ENSPMAG00000010296	sf3b5	99	91.765	Petromyzon_marinus
ENSSHAG00000015670	SF3B5	100	77.907	ENSPCIG00000025007	-	100	77.907	Phascolarctos_cinereus
ENSSHAG00000015670	SF3B5	93	98.750	ENSPCIG00000011344	-	78	98.750	Phascolarctos_cinereus
ENSSHAG00000015670	SF3B5	99	91.765	ENSPFOG00000019994	sf3b5	99	91.765	Poecilia_formosa
ENSSHAG00000015670	SF3B5	99	91.765	ENSPLAG00000008412	sf3b5	99	91.765	Poecilia_latipinna
ENSSHAG00000015670	SF3B5	99	91.765	ENSPMEG00000020050	sf3b5	99	91.765	Poecilia_mexicana
ENSSHAG00000015670	SF3B5	99	91.765	ENSPREG00000009242	sf3b5	99	91.765	Poecilia_reticulata
ENSSHAG00000015670	SF3B5	100	98.837	ENSPPYG00000017068	SF3B5	100	98.837	Pongo_abelii
ENSSHAG00000015670	SF3B5	100	98.837	ENSPCAG00000009332	SF3B5	100	98.837	Procavia_capensis
ENSSHAG00000015670	SF3B5	100	98.837	ENSPCOG00000013754	SF3B5	100	98.837	Propithecus_coquereli
ENSSHAG00000015670	SF3B5	56	97.917	ENSPVAG00000002820	SF3B5	100	97.917	Pteropus_vampyrus
ENSSHAG00000015670	SF3B5	99	92.941	ENSPNYG00000002075	sf3b5	99	92.941	Pundamilia_nyererei
ENSSHAG00000015670	SF3B5	99	95.294	ENSPNAG00000004942	sf3b5	99	95.294	Pygocentrus_nattereri
ENSSHAG00000015670	SF3B5	100	97.674	ENSRNOG00000014908	Sf3b5	100	97.674	Rattus_norvegicus
ENSSHAG00000015670	SF3B5	100	98.837	ENSRBIG00000006301	SF3B5	100	98.837	Rhinopithecus_bieti
ENSSHAG00000015670	SF3B5	100	98.837	ENSRROG00000037067	SF3B5	100	98.837	Rhinopithecus_roxellana
ENSSHAG00000015670	SF3B5	100	98.837	ENSSBOG00000006122	SF3B5	100	98.837	Saimiri_boliviensis_boliviensis
ENSSHAG00000015670	SF3B5	99	94.118	ENSSFOG00015015767	sf3b5	99	94.118	Scleropages_formosus
ENSSHAG00000015670	SF3B5	99	90.588	ENSSMAG00000018852	sf3b5	99	90.588	Scophthalmus_maximus
ENSSHAG00000015670	SF3B5	99	91.765	ENSSDUG00000018161	sf3b5	99	91.765	Seriola_dumerili
ENSSHAG00000015670	SF3B5	99	91.765	ENSSLDG00000014547	sf3b5	99	91.765	Seriola_lalandi_dorsalis
ENSSHAG00000015670	SF3B5	100	98.837	ENSSARG00000007820	SF3B5	100	98.837	Sorex_araneus
ENSSHAG00000015670	SF3B5	99	90.588	ENSSPAG00000009244	sf3b5	99	90.588	Stegastes_partitus
ENSSHAG00000015670	SF3B5	99	90.588	ENSSPAG00000017371	-	99	90.588	Stegastes_partitus
ENSSHAG00000015670	SF3B5	100	98.837	ENSSSCG00000035578	SF3B5	100	98.837	Sus_scrofa
ENSSHAG00000015670	SF3B5	100	96.512	ENSTGUG00000010810	SF3B5	100	96.512	Taeniopygia_guttata
ENSSHAG00000015670	SF3B5	100	89.535	ENSTRUG00000005577	sf3b5	100	89.535	Takifugu_rubripes
ENSSHAG00000015670	SF3B5	100	89.535	ENSTNIG00000001265	sf3b5	100	89.535	Tetraodon_nigroviridis
ENSSHAG00000015670	SF3B5	100	97.674	ENSTBEG00000003072	SF3B5	100	97.674	Tupaia_belangeri
ENSSHAG00000015670	SF3B5	100	98.837	ENSTTRG00000008817	SF3B5	100	98.837	Tursiops_truncatus
ENSSHAG00000015670	SF3B5	100	98.837	ENSUAMG00000027296	SF3B5	100	98.837	Ursus_americanus
ENSSHAG00000015670	SF3B5	100	98.837	ENSUMAG00000005448	SF3B5	100	98.837	Ursus_maritimus
ENSSHAG00000015670	SF3B5	100	98.837	ENSVPAG00000003826	SF3B5	100	98.837	Vicugna_pacos
ENSSHAG00000015670	SF3B5	100	98.837	ENSVVUG00000004703	SF3B5	100	98.837	Vulpes_vulpes
ENSSHAG00000015670	SF3B5	100	94.186	ENSXETG00000021409	sf3b5	100	94.186	Xenopus_tropicalis
ENSSHAG00000015670	SF3B5	99	91.765	ENSXMAG00000019971	sf3b5	99	91.765	Xiphophorus_maculatus