EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000015695 (Gene tree)
Gene ID: 100931522
Gene Symbol: CLP1
Alias: HEAB|hClp1
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 2260 bases
Position: chrGL864900.1:1885875-1888134
Accession: 100931522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018486	Clp1	PF06807.14	5.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018640	CLP1-201	1278	-	ENSSHAP00000018486	425 (aa)	XP_012408145	G3WST1

Gene Model

Click here to download ENSSHAG00000015695's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015695's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015695	CLP1	100	97.647	ENSG00000172409	CLP1	100	97.647	Homo_sapiens
ENSSHAG00000015695	CLP1	97	77.672	ENSAPOG00000008242	clp1	95	77.672	Acanthochromis_polyacanthus
ENSSHAG00000015695	CLP1	100	98.118	ENSAMEG00000014551	CLP1	98	98.118	Ailuropoda_melanoleuca
ENSSHAG00000015695	CLP1	98	76.179	ENSACIG00000006310	clp1	95	76.179	Amphilophus_citrinellus
ENSSHAG00000015695	CLP1	100	75.982	ENSAOCG00000010681	clp1	100	75.982	Amphiprion_ocellaris
ENSSHAG00000015695	CLP1	97	77.672	ENSAPEG00000012165	clp1	98	77.672	Amphiprion_percula
ENSSHAG00000015695	CLP1	99	76.157	ENSATEG00000012374	clp1	98	76.157	Anabas_testudineus
ENSSHAG00000015695	CLP1	100	94.353	ENSACAG00000007139	CLP1	100	94.353	Anolis_carolinensis
ENSSHAG00000015695	CLP1	100	97.647	ENSANAG00000034935	CLP1	100	97.647	Aotus_nancymaae
ENSSHAG00000015695	CLP1	99	75.000	ENSACLG00000013573	clp1	98	75.000	Astatotilapia_calliptera
ENSSHAG00000015695	CLP1	99	78.089	ENSAMXG00000014194	clp1	99	78.089	Astyanax_mexicanus
ENSSHAG00000015695	CLP1	100	98.118	ENSBTAG00000006493	CLP1	100	98.118	Bos_taurus
ENSSHAG00000015695	CLP1	99	47.209	WBGene00010304	clpf-1	99	46.744	Caenorhabditis_elegans
ENSSHAG00000015695	CLP1	100	97.647	ENSCJAG00000008748	CLP1	100	97.647	Callithrix_jacchus
ENSSHAG00000015695	CLP1	100	98.118	ENSCAFG00000007815	CLP1	100	98.118	Canis_familiaris
ENSSHAG00000015695	CLP1	100	98.118	ENSCAFG00020000903	CLP1	100	98.118	Canis_lupus_dingo
ENSSHAG00000015695	CLP1	100	97.412	ENSCHIG00000023497	CLP1	100	97.412	Capra_hircus
ENSSHAG00000015695	CLP1	100	97.647	ENSTSYG00000006824	CLP1	99	97.647	Carlito_syrichta
ENSSHAG00000015695	CLP1	100	97.647	ENSCAPG00000009703	CLP1	100	97.647	Cavia_aperea
ENSSHAG00000015695	CLP1	98	98.317	ENSCPOG00000012554	CLP1	99	98.317	Cavia_porcellus
ENSSHAG00000015695	CLP1	100	97.412	ENSCCAG00000031957	CLP1	100	97.412	Cebus_capucinus
ENSSHAG00000015695	CLP1	100	97.647	ENSCATG00000044628	CLP1	100	97.647	Cercocebus_atys
ENSSHAG00000015695	CLP1	100	97.882	ENSCLAG00000004094	CLP1	100	97.882	Chinchilla_lanigera
ENSSHAG00000015695	CLP1	100	97.647	ENSCSAG00000005994	CLP1	100	97.647	Chlorocebus_sabaeus
ENSSHAG00000015695	CLP1	100	94.588	ENSCPBG00000016843	CLP1	100	94.588	Chrysemys_picta_bellii
ENSSHAG00000015695	CLP1	96	63.659	ENSCING00000003779	-	95	63.659	Ciona_intestinalis
ENSSHAG00000015695	CLP1	99	62.411	ENSCSAVG00000003437	-	99	62.411	Ciona_savignyi
ENSSHAG00000015695	CLP1	100	97.647	ENSCANG00000034335	CLP1	100	97.647	Colobus_angolensis_palliatus
ENSSHAG00000015695	CLP1	100	98.118	ENSCGRG00001002227	CLP1	100	98.118	Cricetulus_griseus_chok1gshd
ENSSHAG00000015695	CLP1	100	98.118	ENSCGRG00000004328	CLP1	100	98.118	Cricetulus_griseus_crigri
ENSSHAG00000015695	CLP1	99	74.710	ENSCSEG00000008614	clp1	98	74.710	Cynoglossus_semilaevis
ENSSHAG00000015695	CLP1	99	75.694	ENSCVAG00000020101	clp1	98	75.694	Cyprinodon_variegatus
ENSSHAG00000015695	CLP1	97	79.475	ENSDARG00000063663	clp1	95	79.475	Danio_rerio
ENSSHAG00000015695	CLP1	99	97.642	ENSDNOG00000042415	CLP1	90	97.642	Dasypus_novemcinctus
ENSSHAG00000015695	CLP1	100	98.118	ENSDORG00000014685	Clp1	100	98.118	Dipodomys_ordii
ENSSHAG00000015695	CLP1	99	56.398	FBgn0033842	cbc	99	56.398	Drosophila_melanogaster
ENSSHAG00000015695	CLP1	100	97.882	ENSETEG00000003009	CLP1	100	97.882	Echinops_telfairi
ENSSHAG00000015695	CLP1	97	72.639	ENSEBUG00000011648	clp1	97	72.639	Eptatretus_burgeri
ENSSHAG00000015695	CLP1	100	97.412	ENSEASG00005002093	CLP1	100	97.412	Equus_asinus_asinus
ENSSHAG00000015695	CLP1	100	97.412	ENSECAG00000011597	CLP1	100	97.412	Equus_caballus
ENSSHAG00000015695	CLP1	100	96.941	ENSEEUG00000012771	CLP1	100	96.941	Erinaceus_europaeus
ENSSHAG00000015695	CLP1	97	79.335	ENSELUG00000024048	clp1	95	79.335	Esox_lucius
ENSSHAG00000015695	CLP1	100	97.882	ENSFCAG00000006633	CLP1	100	97.882	Felis_catus
ENSSHAG00000015695	CLP1	100	92.706	ENSFALG00000011145	CLP1	100	92.706	Ficedula_albicollis
ENSSHAG00000015695	CLP1	100	97.882	ENSFDAG00000000234	CLP1	100	97.882	Fukomys_damarensis
ENSSHAG00000015695	CLP1	99	75.000	ENSFHEG00000014760	CLP1	98	75.000	Fundulus_heteroclitus
ENSSHAG00000015695	CLP1	97	79.665	ENSGMOG00000019340	clp1	95	79.665	Gadus_morhua
ENSSHAG00000015695	CLP1	100	93.412	ENSGALG00000007370	CLP1	100	93.412	Gallus_gallus
ENSSHAG00000015695	CLP1	99	75.463	ENSGAFG00000003020	clp1	99	75.463	Gambusia_affinis
ENSSHAG00000015695	CLP1	99	76.322	ENSGACG00000017832	clp1	99	76.322	Gasterosteus_aculeatus
ENSSHAG00000015695	CLP1	100	94.353	ENSGAGG00000013279	CLP1	100	94.353	Gopherus_agassizii
ENSSHAG00000015695	CLP1	100	97.647	ENSGGOG00000023006	CLP1	100	97.647	Gorilla_gorilla
ENSSHAG00000015695	CLP1	99	75.000	ENSHBUG00000010436	clp1	98	75.000	Haplochromis_burtoni
ENSSHAG00000015695	CLP1	100	97.882	ENSHGLG00000009914	CLP1	100	97.882	Heterocephalus_glaber_female
ENSSHAG00000015695	CLP1	100	97.882	ENSHGLG00100006105	CLP1	100	97.882	Heterocephalus_glaber_male
ENSSHAG00000015695	CLP1	97	78.622	ENSHCOG00000010072	clp1	95	78.622	Hippocampus_comes
ENSSHAG00000015695	CLP1	97	79.762	ENSIPUG00000016238	clp1	94	79.572	Ictalurus_punctatus
ENSSHAG00000015695	CLP1	100	97.882	ENSSTOG00000029257	CLP1	100	97.882	Ictidomys_tridecemlineatus
ENSSHAG00000015695	CLP1	100	97.412	ENSJJAG00000023691	Clp1	100	97.412	Jaculus_jaculus
ENSSHAG00000015695	CLP1	99	74.769	ENSKMAG00000011990	clp1	98	74.769	Kryptolebias_marmoratus
ENSSHAG00000015695	CLP1	99	76.389	ENSLBEG00000010201	clp1	98	76.389	Labrus_bergylta
ENSSHAG00000015695	CLP1	100	85.647	ENSLACG00000003160	CLP1	100	85.647	Latimeria_chalumnae
ENSSHAG00000015695	CLP1	73	77.019	ENSLOCG00000008074	clp1	100	77.950	Lepisosteus_oculatus
ENSSHAG00000015695	CLP1	100	97.647	ENSLAFG00000014907	CLP1	100	97.647	Loxodonta_africana
ENSSHAG00000015695	CLP1	100	97.647	ENSMFAG00000046074	CLP1	100	97.647	Macaca_fascicularis
ENSSHAG00000015695	CLP1	100	97.647	ENSMMUG00000038007	CLP1	99	97.647	Macaca_mulatta
ENSSHAG00000015695	CLP1	100	97.647	ENSMNEG00000000259	CLP1	100	97.647	Macaca_nemestrina
ENSSHAG00000015695	CLP1	100	97.647	ENSMLEG00000043556	CLP1	100	97.647	Mandrillus_leucophaeus
ENSSHAG00000015695	CLP1	100	75.751	ENSMAMG00000002149	clp1	98	75.751	Mastacembelus_armatus
ENSSHAG00000015695	CLP1	99	75.000	ENSMZEG00005002850	clp1	98	75.000	Maylandia_zebra
ENSSHAG00000015695	CLP1	100	93.412	ENSMGAG00000009643	CLP1	100	93.412	Meleagris_gallopavo
ENSSHAG00000015695	CLP1	100	97.412	ENSMAUG00000016261	Clp1	100	97.412	Mesocricetus_auratus
ENSSHAG00000015695	CLP1	100	98.118	ENSMICG00000004895	CLP1	100	98.118	Microcebus_murinus
ENSSHAG00000015695	CLP1	100	98.353	ENSMOCG00000005498	Clp1	100	98.353	Microtus_ochrogaster
ENSSHAG00000015695	CLP1	97	78.622	ENSMMOG00000003229	clp1	95	78.622	Mola_mola
ENSSHAG00000015695	CLP1	100	99.765	ENSMODG00000020107	-	100	99.765	Monodelphis_domestica
ENSSHAG00000015695	CLP1	100	99.765	ENSMODG00000024148	-	100	99.765	Monodelphis_domestica
ENSSHAG00000015695	CLP1	97	76.960	ENSMALG00000014239	clp1	95	76.960	Monopterus_albus
ENSSHAG00000015695	CLP1	100	97.882	MGP_CAROLIEiJ_G0023726	Clp1	100	97.882	Mus_caroli
ENSSHAG00000015695	CLP1	100	97.882	ENSMUSG00000027079	Clp1	100	97.882	Mus_musculus
ENSSHAG00000015695	CLP1	100	97.647	MGP_PahariEiJ_G0025177	Clp1	100	97.647	Mus_pahari
ENSSHAG00000015695	CLP1	100	97.882	MGP_SPRETEiJ_G0024646	Clp1	100	97.882	Mus_spretus
ENSSHAG00000015695	CLP1	100	98.118	ENSMPUG00000000268	CLP1	100	98.118	Mustela_putorius_furo
ENSSHAG00000015695	CLP1	100	97.412	ENSMLUG00000007904	CLP1	100	97.412	Myotis_lucifugus
ENSSHAG00000015695	CLP1	100	97.882	ENSNGAG00000006165	Clp1	100	97.882	Nannospalax_galili
ENSSHAG00000015695	CLP1	99	75.000	ENSNBRG00000005225	clp1	98	75.000	Neolamprologus_brichardi
ENSSHAG00000015695	CLP1	82	91.200	ENSNLEG00000012809	-	100	91.200	Nomascus_leucogenys
ENSSHAG00000015695	CLP1	100	99.765	ENSMEUG00000010949	CLP1	99	99.765	Notamacropus_eugenii
ENSSHAG00000015695	CLP1	70	98.658	ENSOPRG00000007329	CLP1	100	98.658	Ochotona_princeps
ENSSHAG00000015695	CLP1	100	97.882	ENSODEG00000011410	CLP1	100	97.882	Octodon_degus
ENSSHAG00000015695	CLP1	99	74.769	ENSONIG00000005089	clp1	98	74.769	Oreochromis_niloticus
ENSSHAG00000015695	CLP1	100	97.882	ENSOCUG00000007045	CLP1	100	97.882	Oryctolagus_cuniculus
ENSSHAG00000015695	CLP1	99	74.537	ENSORLG00000003647	clp1	98	74.537	Oryzias_latipes
ENSSHAG00000015695	CLP1	99	74.306	ENSORLG00020016676	clp1	96	75.708	Oryzias_latipes_hni
ENSSHAG00000015695	CLP1	99	74.537	ENSORLG00015019484	clp1	98	74.537	Oryzias_latipes_hsok
ENSSHAG00000015695	CLP1	98	76.415	ENSOMEG00000021303	clp1	96	76.415	Oryzias_melastigma
ENSSHAG00000015695	CLP1	100	97.882	ENSOGAG00000004508	CLP1	100	97.882	Otolemur_garnettii
ENSSHAG00000015695	CLP1	100	96.471	ENSOARG00000010145	CLP1	98	96.471	Ovis_aries
ENSSHAG00000015695	CLP1	100	97.647	ENSPPAG00000041519	CLP1	100	97.647	Pan_paniscus
ENSSHAG00000015695	CLP1	100	97.882	ENSPPRG00000006135	CLP1	100	97.882	Panthera_pardus
ENSSHAG00000015695	CLP1	100	97.882	ENSPTIG00000015866	CLP1	100	97.882	Panthera_tigris_altaica
ENSSHAG00000015695	CLP1	100	97.647	ENSPTRG00000047318	CLP1	100	97.647	Pan_troglodytes
ENSSHAG00000015695	CLP1	100	97.647	ENSPANG00000017078	CLP1	97	97.647	Papio_anubis
ENSSHAG00000015695	CLP1	97	80.387	ENSPKIG00000007697	clp1	94	80.387	Paramormyrops_kingsleyae
ENSSHAG00000015695	CLP1	95	92.040	ENSPSIG00000005468	CLP1	100	92.040	Pelodiscus_sinensis
ENSSHAG00000015695	CLP1	97	77.910	ENSPMGG00000012171	clp1	96	77.910	Periophthalmus_magnuspinnatus
ENSSHAG00000015695	CLP1	100	98.353	ENSPEMG00000011213	-	100	98.353	Peromyscus_maniculatus_bairdii
ENSSHAG00000015695	CLP1	100	76.291	ENSPMAG00000006707	clp1	100	75.822	Petromyzon_marinus
ENSSHAG00000015695	CLP1	100	99.294	ENSPCIG00000011899	CLP1	99	99.294	Phascolarctos_cinereus
ENSSHAG00000015695	CLP1	99	75.000	ENSPFOG00000008169	clp1	98	75.000	Poecilia_formosa
ENSSHAG00000015695	CLP1	99	75.174	ENSPLAG00000022388	clp1	99	75.174	Poecilia_latipinna
ENSSHAG00000015695	CLP1	99	75.174	ENSPMEG00000021088	clp1	99	75.174	Poecilia_mexicana
ENSSHAG00000015695	CLP1	99	75.231	ENSPREG00000017802	clp1	98	75.231	Poecilia_reticulata
ENSSHAG00000015695	CLP1	53	98.661	ENSPPYG00000003266	-	100	98.661	Pongo_abelii
ENSSHAG00000015695	CLP1	100	98.118	ENSPCOG00000000360	CLP1	98	98.118	Propithecus_coquereli
ENSSHAG00000015695	CLP1	100	98.118	ENSPVAG00000016270	CLP1	100	98.118	Pteropus_vampyrus
ENSSHAG00000015695	CLP1	99	75.000	ENSPNYG00000017274	clp1	97	75.000	Pundamilia_nyererei
ENSSHAG00000015695	CLP1	97	80.476	ENSPNAG00000026460	clp1	95	80.523	Pygocentrus_nattereri
ENSSHAG00000015695	CLP1	100	97.882	ENSRNOG00000007416	Clp1	100	97.882	Rattus_norvegicus
ENSSHAG00000015695	CLP1	100	97.647	ENSRBIG00000018191	CLP1	100	97.647	Rhinopithecus_bieti
ENSSHAG00000015695	CLP1	100	97.647	ENSRROG00000039265	CLP1	100	97.647	Rhinopithecus_roxellana
ENSSHAG00000015695	CLP1	96	78.325	ENSSBOG00000010558	-	93	78.325	Saimiri_boliviensis_boliviensis
ENSSHAG00000015695	CLP1	100	97.647	ENSSBOG00000032517	-	100	97.647	Saimiri_boliviensis_boliviensis
ENSSHAG00000015695	CLP1	97	79.059	ENSSFOG00015000628	clp1	96	79.059	Scleropages_formosus
ENSSHAG00000015695	CLP1	99	75.231	ENSSMAG00000019423	clp1	97	75.231	Scophthalmus_maximus
ENSSHAG00000015695	CLP1	97	78.147	ENSSDUG00000014495	clp1	95	78.147	Seriola_dumerili
ENSSHAG00000015695	CLP1	97	77.910	ENSSLDG00000000937	clp1	95	77.910	Seriola_lalandi_dorsalis
ENSSHAG00000015695	CLP1	52	98.206	ENSSARG00000002459	CLP1	100	98.206	Sorex_araneus
ENSSHAG00000015695	CLP1	100	93.412	ENSSPUG00000016811	CLP1	100	93.412	Sphenodon_punctatus
ENSSHAG00000015695	CLP1	97	77.197	ENSSPAG00000016052	clp1	95	77.197	Stegastes_partitus
ENSSHAG00000015695	CLP1	100	98.118	ENSSSCG00000031442	CLP1	100	98.118	Sus_scrofa
ENSSHAG00000015695	CLP1	100	92.471	ENSTGUG00000007002	CLP1	100	92.471	Taeniopygia_guttata
ENSSHAG00000015695	CLP1	99	76.636	ENSTRUG00000012602	clp1	98	76.636	Takifugu_rubripes
ENSSHAG00000015695	CLP1	99	76.168	ENSTNIG00000013125	clp1	98	76.168	Tetraodon_nigroviridis
ENSSHAG00000015695	CLP1	100	97.176	ENSTBEG00000009975	CLP1	100	97.176	Tupaia_belangeri
ENSSHAG00000015695	CLP1	100	97.647	ENSTTRG00000002096	CLP1	100	97.647	Tursiops_truncatus
ENSSHAG00000015695	CLP1	100	98.118	ENSUAMG00000011388	CLP1	100	98.118	Ursus_americanus
ENSSHAG00000015695	CLP1	100	98.118	ENSUMAG00000018317	CLP1	100	98.118	Ursus_maritimus
ENSSHAG00000015695	CLP1	100	98.118	ENSVVUG00000017138	CLP1	97	98.118	Vulpes_vulpes
ENSSHAG00000015695	CLP1	98	77.698	ENSXETG00000007088	clp1	95	78.657	Xenopus_tropicalis
ENSSHAG00000015695	CLP1	99	75.231	ENSXCOG00000002287	clp1	98	75.231	Xiphophorus_couchianus
ENSSHAG00000015695	CLP1	99	75.231	ENSXMAG00000009783	clp1	98	75.231	Xiphophorus_maculatus