EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000015789 (Gene tree)
Gene ID: 100930119
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 128840 bases
Position: chrGL864845.1:1918838-2047677
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018599	Fip1	PF05182.13	1.2e-25	1	1
ENSSHAP00000018598	Fip1	PF05182.13	6.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018753	-	896	-	ENSSHAP00000018599	279 (aa)	-	G3WT44
ENSSHAT00000018752	-	1772	-	ENSSHAP00000018598	570 (aa)	-	G3WT43

Gene Model

Click here to download ENSSHAG00000015789's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015789	-	61	75.510	ENSACIG00000001454	fip1l1b	69	67.797	Amphilophus_citrinellus
ENSSHAG00000015789	-	65	65.072	ENSAOCG00000021043	fip1l1b	84	54.599	Amphiprion_ocellaris
ENSSHAG00000015789	-	86	52.680	ENSAPEG00000022229	fip1l1b	84	54.599	Amphiprion_percula
ENSSHAG00000015789	-	86	58.350	ENSATEG00000021757	fip1l1b	84	54.207	Anabas_testudineus
ENSSHAG00000015789	-	94	74.592	ENSAPLG00000003042	-	98	74.638	Anas_platyrhynchos
ENSSHAG00000015789	-	80	93.939	ENSACAG00000010556	-	97	75.085	Anolis_carolinensis
ENSSHAG00000015789	-	86	57.564	ENSACLG00000010418	fip1l1b	84	53.488	Astatotilapia_calliptera
ENSSHAG00000015789	-	81	43.277	ENSAMXG00000031045	fip1l1a	59	47.030	Astyanax_mexicanus
ENSSHAG00000015789	-	98	84.174	ENSBTAG00000020653	FIP1L1	95	85.217	Bos_taurus
ENSSHAG00000015789	-	96	86.501	ENSCHIG00000025903	-	95	86.323	Capra_hircus
ENSSHAG00000015789	-	94	79.252	ENSCAPG00000009569	-	90	75.514	Cavia_aperea
ENSSHAG00000015789	-	98	82.143	ENSCPOG00000010770	-	99	87.346	Cavia_porcellus
ENSSHAG00000015789	-	96	84.043	ENSCPBG00000025019	-	96	84.397	Chrysemys_picta_bellii
ENSSHAG00000015789	-	98	86.979	ENSCGRG00001018568	Fip1l1	95	88.542	Cricetulus_griseus_chok1gshd
ENSSHAG00000015789	-	98	86.979	ENSCGRG00000000208	Fip1l1	95	88.542	Cricetulus_griseus_crigri
ENSSHAG00000015789	-	86	56.582	ENSCSEG00000006583	fip1l1b	83	54.795	Cynoglossus_semilaevis
ENSSHAG00000015789	-	86	58.039	ENSCVAG00000023435	fip1l1b	83	53.320	Cyprinodon_variegatus
ENSSHAG00000015789	-	65	51.337	ENSDARG00000043328	fip1l1a	64	44.444	Danio_rerio
ENSSHAG00000015789	-	94	72.963	ENSETEG00000018271	-	100	73.333	Echinops_telfairi
ENSSHAG00000015789	-	51	59.355	ENSEBUG00000016765	-	86	56.557	Eptatretus_burgeri
ENSSHAG00000015789	-	94	89.033	ENSEASG00005019566	-	93	89.033	Equus_asinus_asinus
ENSSHAG00000015789	-	77	87.186	ENSEEUG00000004965	-	71	88.945	Erinaceus_europaeus
ENSSHAG00000015789	-	86	46.139	ENSELUG00000004607	fip1l1a	69	43.458	Esox_lucius
ENSSHAG00000015789	-	86	56.589	ENSFHEG00000003843	fip1l1b	70	52.252	Fundulus_heteroclitus
ENSSHAG00000015789	-	86	51.663	ENSGMOG00000004913	fip1l1b	64	52.304	Gadus_morhua
ENSSHAG00000015789	-	72	39.512	ENSGMOG00000012065	-	59	38.756	Gadus_morhua
ENSSHAG00000015789	-	96	74.513	ENSGALG00000013943	-	95	74.867	Gallus_gallus
ENSSHAG00000015789	-	58	63.277	ENSGALG00000007683	-	96	63.277	Gallus_gallus
ENSSHAG00000015789	-	86	57.752	ENSGAFG00000008253	fip1l1b	82	53.282	Gambusia_affinis
ENSSHAG00000015789	-	96	84.397	ENSGAGG00000009763	-	96	84.752	Gopherus_agassizii
ENSSHAG00000015789	-	65	63.131	ENSGAGG00000017677	-	54	63.131	Gopherus_agassizii
ENSSHAG00000015789	-	86	57.564	ENSHBUG00000013978	fip1l1b	87	53.488	Haplochromis_burtoni
ENSSHAG00000015789	-	86	57.864	ENSHCOG00000015834	fip1l1b	70	54.299	Hippocampus_comes
ENSSHAG00000015789	-	86	56.556	ENSKMAG00000021938	fip1l1b	83	52.250	Kryptolebias_marmoratus
ENSSHAG00000015789	-	86	55.929	ENSLBEG00000028819	fip1l1b	83	52.632	Labrus_bergylta
ENSSHAG00000015789	-	96	62.721	ENSLACG00000011991	fip1l1a	97	66.537	Latimeria_chalumnae
ENSSHAG00000015789	-	93	56.577	ENSLOCG00000014127	fip1l1b	96	51.624	Lepisosteus_oculatus
ENSSHAG00000015789	-	86	57.480	ENSMAMG00000004535	fip1l1b	83	55.098	Mastacembelus_armatus
ENSSHAG00000015789	-	86	57.564	ENSMZEG00005023828	fip1l1b	84	53.488	Maylandia_zebra
ENSSHAG00000015789	-	94	74.302	ENSMGAG00000011885	-	94	78.947	Meleagris_gallopavo
ENSSHAG00000015789	-	98	78.984	ENSMAUG00000010526	Fip1l1	95	80.035	Mesocricetus_auratus
ENSSHAG00000015789	-	98	83.012	ENSMOCG00000008020	Fip1l1	94	87.261	Microtus_ochrogaster
ENSSHAG00000015789	-	82	51.129	ENSMMOG00000008262	fip1l1b	86	50.743	Mola_mola
ENSSHAG00000015789	-	79	98.052	ENSMODG00000020654	-	88	98.052	Monodelphis_domestica
ENSSHAG00000015789	-	86	52.362	ENSMALG00000000838	fip1l1b	89	47.266	Monopterus_albus
ENSSHAG00000015789	-	98	83.713	MGP_CAROLIEiJ_G0027304	Fip1l1	94	88.725	Mus_caroli
ENSSHAG00000015789	-	98	83.713	ENSMUSG00000029227	Fip1l1	94	88.725	Mus_musculus
ENSSHAG00000015789	-	98	83.713	MGP_PahariEiJ_G0017085	Fip1l1	94	88.725	Mus_pahari
ENSSHAG00000015789	-	98	83.713	MGP_SPRETEiJ_G0028299	Fip1l1	94	88.725	Mus_spretus
ENSSHAG00000015789	-	98	85.940	ENSNGAG00000008849	Fip1l1	93	90.618	Nannospalax_galili
ENSSHAG00000015789	-	86	57.564	ENSNBRG00000017832	fip1l1b	84	53.620	Neolamprologus_brichardi
ENSSHAG00000015789	-	71	100.000	ENSMEUG00000012782	-	58	66.096	Notamacropus_eugenii
ENSSHAG00000015789	-	86	57.367	ENSONIG00000008785	fip1l1b	84	53.620	Oreochromis_niloticus
ENSSHAG00000015789	-	94	81.720	ENSOANG00000003384	-	98	81.362	Ornithorhynchus_anatinus
ENSSHAG00000015789	-	68	56.796	ENSOANG00000002812	-	94	55.399	Ornithorhynchus_anatinus
ENSSHAG00000015789	-	86	57.283	ENSORLG00000004397	fip1l1b	83	52.157	Oryzias_latipes
ENSSHAG00000015789	-	86	57.283	ENSORLG00020008716	fip1l1b	83	52.353	Oryzias_latipes_hni
ENSSHAG00000015789	-	86	57.087	ENSORLG00015006736	fip1l1b	83	51.961	Oryzias_latipes_hsok
ENSSHAG00000015789	-	86	44.444	ENSOMEG00000015730	fip1l1b	69	62.366	Oryzias_melastigma
ENSSHAG00000015789	-	98	86.596	ENSOARG00000018767	-	95	88.007	Ovis_aries
ENSSHAG00000015789	-	87	54.365	ENSPKIG00000003396	fip1l1b	50	59.919	Paramormyrops_kingsleyae
ENSSHAG00000015789	-	98	84.764	ENSPEMG00000002025	Fip1l1	95	85.289	Peromyscus_maniculatus_bairdii
ENSSHAG00000015789	-	55	99.367	ENSPCIG00000019318	-	93	99.367	Phascolarctos_cinereus
ENSSHAG00000015789	-	86	53.876	ENSPFOG00000014745	fip1l1b	83	52.896	Poecilia_formosa
ENSSHAG00000015789	-	86	53.965	ENSPLAG00000010954	fip1l1b	83	53.372	Poecilia_latipinna
ENSSHAG00000015789	-	86	53.682	ENSPMEG00000019187	fip1l1b	83	53.089	Poecilia_mexicana
ENSSHAG00000015789	-	65	59.474	ENSPREG00000012535	fip1l1b	69	47.568	Poecilia_reticulata
ENSSHAG00000015789	-	65	64.762	ENSPNYG00000015976	fip1l1b	61	61.039	Pundamilia_nyererei
ENSSHAG00000015789	-	67	51.031	ENSPNAG00000009853	fip1l1a	60	48.325	Pygocentrus_nattereri
ENSSHAG00000015789	-	98	83.713	ENSRNOG00000002275	Fip1l1	95	85.814	Rattus_norvegicus
ENSSHAG00000015789	-	65	69.792	ENSSFOG00015017653	fip1l1b	75	51.402	Scleropages_formosus
ENSSHAG00000015789	-	65	58.209	ENSSFOG00015010948	-	54	58.209	Scleropages_formosus
ENSSHAG00000015789	-	86	57.339	ENSSMAG00000013444	fip1l1b	84	57.115	Scophthalmus_maximus
ENSSHAG00000015789	-	86	57.760	ENSSDUG00000004117	fip1l1b	84	54.207	Seriola_dumerili
ENSSHAG00000015789	-	86	58.465	ENSSLDG00000024099	fip1l1b	84	58.431	Seriola_lalandi_dorsalis
ENSSHAG00000015789	-	76	95.939	ENSSARG00000001973	-	87	84.008	Sorex_araneus
ENSSHAG00000015789	-	73	80.288	ENSSPUG00000017328	-	76	80.288	Sphenodon_punctatus
ENSSHAG00000015789	-	86	57.564	ENSSPAG00000017564	fip1l1b	84	54.403	Stegastes_partitus
ENSSHAG00000015789	-	94	73.098	ENSTGUG00000007834	-	95	77.419	Taeniopygia_guttata
ENSSHAG00000015789	-	86	57.730	ENSTNIG00000004104	fip1l1b	71	55.093	Tetraodon_nigroviridis
ENSSHAG00000015789	-	65	91.379	ENSTBEG00000007839	-	84	91.379	Tupaia_belangeri
ENSSHAG00000015789	-	94	92.463	ENSUMAG00000002758	-	99	92.449	Ursus_maritimus
ENSSHAG00000015789	-	88	95.939	ENSVPAG00000011574	-	99	82.124	Vicugna_pacos
ENSSHAG00000015789	-	84	76.860	ENSXETG00000011679	fip1l1	78	73.934	Xenopus_tropicalis
ENSSHAG00000015789	-	65	71.503	ENSXCOG00000013656	fip1l1b	60	56.735	Xiphophorus_couchianus
ENSSHAG00000015789	-	86	57.558	ENSXMAG00000017620	fip1l1b	83	53.282	Xiphophorus_maculatus