EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000015882 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 22641 bases
Position: chrGL841485.1:1947017-1969657
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018709	MIF4G_like_2	PF09090.11	1.6e-75	1	1
ENSSHAP00000018709	MIF4G	PF02854.19	1.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000018864	NCBP1-201	2214	-	ENSSHAP00000018709	738 (aa)	-	G3WTF4

Gene Model

Click here to download ENSSHAG00000015882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000015882's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000015882	NCBP1	73	95.331	ENSG00000136937	NCBP1	77	90.756	Homo_sapiens
ENSSHAG00000015882	NCBP1	73	79.389	ENSAPOG00000008002	NCBP1	70	78.244	Acanthochromis_polyacanthus
ENSSHAG00000015882	NCBP1	73	95.720	ENSAMEG00000004763	NCBP1	69	95.720	Ailuropoda_melanoleuca
ENSSHAG00000015882	NCBP1	71	78.927	ENSACIG00000000274	NCBP1	67	79.310	Amphilophus_citrinellus
ENSSHAG00000015882	NCBP1	73	80.153	ENSAOCG00000021148	NCBP1	70	79.008	Amphiprion_ocellaris
ENSSHAG00000015882	NCBP1	73	80.153	ENSAPEG00000001701	NCBP1	70	79.008	Amphiprion_percula
ENSSHAG00000015882	NCBP1	73	79.389	ENSATEG00000006929	NCBP1	70	79.008	Anabas_testudineus
ENSSHAG00000015882	NCBP1	68	87.308	ENSAPLG00000016318	NCBP1	69	88.168	Anas_platyrhynchos
ENSSHAG00000015882	NCBP1	72	85.393	ENSACAG00000004409	NCBP1	61	84.758	Anolis_carolinensis
ENSSHAG00000015882	NCBP1	68	95.720	ENSANAG00000025744	NCBP1	65	95.720	Aotus_nancymaae
ENSSHAG00000015882	NCBP1	71	79.008	ENSACLG00000014812	NCBP1	67	78.626	Astatotilapia_calliptera
ENSSHAG00000015882	NCBP1	72	77.519	ENSAMXG00000016364	NCBP1	70	76.515	Astyanax_mexicanus
ENSSHAG00000015882	NCBP1	73	95.720	ENSBTAG00000009732	NCBP1	69	95.720	Bos_taurus
ENSSHAG00000015882	NCBP1	72	39.655	WBGene00018156	ncbp-1	68	39.655	Caenorhabditis_elegans
ENSSHAG00000015882	NCBP1	73	95.720	ENSCJAG00000010840	NCBP1	69	95.720	Callithrix_jacchus
ENSSHAG00000015882	NCBP1	73	95.720	ENSCAFG00000002445	NCBP1	69	95.720	Canis_familiaris
ENSSHAG00000015882	NCBP1	72	95.720	ENSCAFG00020017997	NCBP1	68	95.720	Canis_lupus_dingo
ENSSHAG00000015882	NCBP1	73	93.750	ENSCHIG00000020139	NCBP1	69	94.186	Capra_hircus
ENSSHAG00000015882	NCBP1	53	91.573	ENSCAPG00000014252	NCBP1	60	91.111	Cavia_aperea
ENSSHAG00000015882	NCBP1	95	60.645	ENSCPOG00000012573	NCBP1	99	60.802	Cavia_porcellus
ENSSHAG00000015882	NCBP1	73	95.720	ENSCCAG00000032297	NCBP1	99	61.290	Cebus_capucinus
ENSSHAG00000015882	NCBP1	73	95.331	ENSCATG00000010052	NCBP1	99	61.166	Cercocebus_atys
ENSSHAG00000015882	NCBP1	99	61.146	ENSCLAG00000014339	NCBP1	99	61.395	Chinchilla_lanigera
ENSSHAG00000015882	NCBP1	73	95.331	ENSCSAG00000010929	NCBP1	99	61.166	Chlorocebus_sabaeus
ENSSHAG00000015882	NCBP1	62	98.551	ENSCHOG00000010332	NCBP1	59	98.551	Choloepus_hoffmanni
ENSSHAG00000015882	NCBP1	77	80.678	ENSCPBG00000024344	NCBP1	78	81.017	Chrysemys_picta_bellii
ENSSHAG00000015882	NCBP1	68	53.101	ENSCING00000008990	-	65	52.713	Ciona_intestinalis
ENSSHAG00000015882	NCBP1	68	53.906	ENSCSAVG00000005300	-	99	54.450	Ciona_savignyi
ENSSHAG00000015882	NCBP1	73	95.331	ENSCANG00000036913	NCBP1	99	61.166	Colobus_angolensis_palliatus
ENSSHAG00000015882	NCBP1	73	95.349	ENSCGRG00001015771	Ncbp1	70	95.349	Cricetulus_griseus_chok1gshd
ENSSHAG00000015882	NCBP1	72	95.349	ENSCGRG00000010311	Ncbp1	69	95.349	Cricetulus_griseus_crigri
ENSSHAG00000015882	NCBP1	73	79.771	ENSCSEG00000012377	NCBP1	70	78.244	Cynoglossus_semilaevis
ENSSHAG00000015882	NCBP1	73	76.426	ENSCVAG00000008795	NCBP1	70	78.327	Cyprinodon_variegatus
ENSSHAG00000015882	NCBP1	73	94.942	ENSDNOG00000006885	NCBP1	99	61.021	Dasypus_novemcinctus
ENSSHAG00000015882	NCBP1	73	96.109	ENSDORG00000013652	Ncbp1	69	96.109	Dipodomys_ordii
ENSSHAG00000015882	NCBP1	98	41.058	FBgn0022942	Cbp80	98	40.932	Drosophila_melanogaster
ENSSHAG00000015882	NCBP1	65	93.774	ENSETEG00000009705	NCBP1	61	92.218	Echinops_telfairi
ENSSHAG00000015882	NCBP1	72	73.077	ENSEBUG00000008386	NCBP1	70	71.264	Eptatretus_burgeri
ENSSHAG00000015882	NCBP1	73	93.359	ENSEASG00005022795	NCBP1	69	93.798	Equus_asinus_asinus
ENSSHAG00000015882	NCBP1	73	93.359	ENSECAG00000013847	NCBP1	69	93.798	Equus_caballus
ENSSHAG00000015882	NCBP1	59	95.890	ENSEEUG00000015973	NCBP1	58	95.890	Erinaceus_europaeus
ENSSHAG00000015882	NCBP1	72	74.144	ENSELUG00000022519	NCBP1	69	76.806	Esox_lucius
ENSSHAG00000015882	NCBP1	70	95.720	ENSFCAG00000001206	NCBP1	67	95.720	Felis_catus
ENSSHAG00000015882	NCBP1	72	85.985	ENSFALG00000001193	NCBP1	70	86.742	Ficedula_albicollis
ENSSHAG00000015882	NCBP1	72	95.331	ENSFDAG00000010864	NCBP1	99	61.481	Fukomys_damarensis
ENSSHAG00000015882	NCBP1	73	78.516	ENSFHEG00000000655	NCBP1	71	77.344	Fundulus_heteroclitus
ENSSHAG00000015882	NCBP1	72	75.573	ENSGMOG00000008653	NCBP1	68	74.525	Gadus_morhua
ENSSHAG00000015882	NCBP1	72	88.327	ENSGALG00000002087	NCBP1	69	88.417	Gallus_gallus
ENSSHAG00000015882	NCBP1	99	56.218	ENSGAFG00000017787	NCBP1	99	56.274	Gambusia_affinis
ENSSHAG00000015882	NCBP1	73	77.186	ENSGACG00000016772	NCBP1	69	76.515	Gasterosteus_aculeatus
ENSSHAG00000015882	NCBP1	73	88.506	ENSGAGG00000019483	NCBP1	70	88.593	Gopherus_agassizii
ENSSHAG00000015882	NCBP1	73	95.331	ENSGGOG00000001376	NCBP1	99	61.166	Gorilla_gorilla
ENSSHAG00000015882	NCBP1	71	79.008	ENSHBUG00000020843	NCBP1	67	78.626	Haplochromis_burtoni
ENSSHAG00000015882	NCBP1	73	84.314	ENSHGLG00000018112	-	69	84.109	Heterocephalus_glaber_female
ENSSHAG00000015882	NCBP1	99	61.042	ENSHGLG00000001882	NCBP1	99	61.290	Heterocephalus_glaber_female
ENSSHAG00000015882	NCBP1	99	61.042	ENSHGLG00100013014	NCBP1	99	61.290	Heterocephalus_glaber_male
ENSSHAG00000015882	NCBP1	73	84.314	ENSHGLG00100017373	-	69	84.109	Heterocephalus_glaber_male
ENSSHAG00000015882	NCBP1	75	45.779	ENSHCOG00000000204	NCBP1	91	45.455	Hippocampus_comes
ENSSHAG00000015882	NCBP1	72	78.599	ENSIPUG00000007275	ncbp1	70	77.947	Ictalurus_punctatus
ENSSHAG00000015882	NCBP1	73	96.109	ENSSTOG00000002695	NCBP1	72	96.109	Ictidomys_tridecemlineatus
ENSSHAG00000015882	NCBP1	73	77.863	ENSKMAG00000003594	NCBP1	70	76.718	Kryptolebias_marmoratus
ENSSHAG00000015882	NCBP1	99	54.624	ENSLBEG00000011661	NCBP1	99	54.501	Labrus_bergylta
ENSSHAG00000015882	NCBP1	72	70.526	ENSLACG00000013955	NCBP1	98	52.250	Latimeria_chalumnae
ENSSHAG00000015882	NCBP1	64	80.000	ENSLOCG00000009579	NCBP1	61	79.693	Lepisosteus_oculatus
ENSSHAG00000015882	NCBP1	73	95.331	ENSLAFG00000005999	NCBP1	69	95.331	Loxodonta_africana
ENSSHAG00000015882	NCBP1	73	95.331	ENSMFAG00000030994	NCBP1	99	61.166	Macaca_fascicularis
ENSSHAG00000015882	NCBP1	72	95.331	ENSMMUG00000012281	NCBP1	99	61.481	Macaca_mulatta
ENSSHAG00000015882	NCBP1	73	95.331	ENSMNEG00000042790	NCBP1	99	61.166	Macaca_nemestrina
ENSSHAG00000015882	NCBP1	73	95.331	ENSMLEG00000030374	NCBP1	99	61.166	Mandrillus_leucophaeus
ENSSHAG00000015882	NCBP1	73	80.153	ENSMAMG00000014806	NCBP1	70	79.008	Mastacembelus_armatus
ENSSHAG00000015882	NCBP1	71	79.008	ENSMZEG00005003469	NCBP1	67	78.626	Maylandia_zebra
ENSSHAG00000015882	NCBP1	68	80.000	ENSMZEG00005009290	-	67	80.392	Maylandia_zebra
ENSSHAG00000015882	NCBP1	73	95.331	ENSMAUG00000020583	Ncbp1	69	95.349	Mesocricetus_auratus
ENSSHAG00000015882	NCBP1	73	94.942	ENSMICG00000012682	NCBP1	69	94.942	Microcebus_murinus
ENSSHAG00000015882	NCBP1	73	93.411	ENSMOCG00000015818	Ncbp1	69	94.186	Microtus_ochrogaster
ENSSHAG00000015882	NCBP1	55	83.660	ENSMMOG00000002610	NCBP1	57	83.660	Mola_mola
ENSSHAG00000015882	NCBP1	72	100.000	ENSMODG00000003202	NCBP1	68	100.000	Monodelphis_domestica
ENSSHAG00000015882	NCBP1	73	77.481	ENSMALG00000003547	NCBP1	69	78.824	Monopterus_albus
ENSSHAG00000015882	NCBP1	73	93.385	MGP_CAROLIEiJ_G0025982	Ncbp1	69	93.798	Mus_caroli
ENSSHAG00000015882	NCBP1	73	93.385	ENSMUSG00000028330	Ncbp1	69	93.798	Mus_musculus
ENSSHAG00000015882	NCBP1	73	95.331	MGP_PahariEiJ_G0028318	Ncbp1	69	95.331	Mus_pahari
ENSSHAG00000015882	NCBP1	73	93.385	MGP_SPRETEiJ_G0026945	Ncbp1	69	93.798	Mus_spretus
ENSSHAG00000015882	NCBP1	73	95.720	ENSMPUG00000006399	NCBP1	69	95.720	Mustela_putorius_furo
ENSSHAG00000015882	NCBP1	71	93.359	ENSMLUG00000015201	NCBP1	69	93.798	Myotis_lucifugus
ENSSHAG00000015882	NCBP1	74	95.720	ENSNGAG00000014101	Ncbp1	70	95.720	Nannospalax_galili
ENSSHAG00000015882	NCBP1	57	81.304	ENSNBRG00000014674	NCBP1	85	80.687	Neolamprologus_brichardi
ENSSHAG00000015882	NCBP1	73	95.331	ENSNLEG00000016909	NCBP1	99	61.166	Nomascus_leucogenys
ENSSHAG00000015882	NCBP1	67	100.000	ENSMEUG00000010672	NCBP1	65	100.000	Notamacropus_eugenii
ENSSHAG00000015882	NCBP1	51	93.151	ENSOPRG00000002144	-	52	93.213	Ochotona_princeps
ENSSHAG00000015882	NCBP1	72	95.331	ENSODEG00000003232	NCBP1	71	95.331	Octodon_degus
ENSSHAG00000015882	NCBP1	73	79.008	ENSONIG00000001502	NCBP1	70	78.626	Oreochromis_niloticus
ENSSHAG00000015882	NCBP1	67	93.724	ENSOCUG00000013853	NCBP1	65	93.776	Oryctolagus_cuniculus
ENSSHAG00000015882	NCBP1	99	55.082	ENSORLG00000011008	NCBP1	99	55.013	Oryzias_latipes
ENSSHAG00000015882	NCBP1	99	55.263	ENSORLG00020017455	NCBP1	99	55.013	Oryzias_latipes_hni
ENSSHAG00000015882	NCBP1	99	55.263	ENSORLG00015012127	NCBP1	99	55.138	Oryzias_latipes_hsok
ENSSHAG00000015882	NCBP1	99	55.556	ENSOMEG00000020698	NCBP1	99	55.556	Oryzias_melastigma
ENSSHAG00000015882	NCBP1	72	95.720	ENSOGAG00000013888	NCBP1	68	95.720	Otolemur_garnettii
ENSSHAG00000015882	NCBP1	74	93.750	ENSOARG00000011233	NCBP1	70	94.186	Ovis_aries
ENSSHAG00000015882	NCBP1	73	95.331	ENSPPAG00000026462	NCBP1	99	61.166	Pan_paniscus
ENSSHAG00000015882	NCBP1	73	95.720	ENSPPRG00000022574	NCBP1	69	95.720	Panthera_pardus
ENSSHAG00000015882	NCBP1	73	95.720	ENSPTIG00000018507	NCBP1	69	95.720	Panthera_tigris_altaica
ENSSHAG00000015882	NCBP1	73	95.331	ENSPTRG00000021167	NCBP1	99	61.166	Pan_troglodytes
ENSSHAG00000015882	NCBP1	73	95.331	ENSPANG00000025591	NCBP1	99	61.166	Papio_anubis
ENSSHAG00000015882	NCBP1	72	74.708	ENSPKIG00000015861	NCBP1	70	76.046	Paramormyrops_kingsleyae
ENSSHAG00000015882	NCBP1	71	77.132	ENSPMGG00000020476	NCBP1	70	76.448	Periophthalmus_magnuspinnatus
ENSSHAG00000015882	NCBP1	73	94.186	ENSPEMG00000020105	Ncbp1	70	94.574	Peromyscus_maniculatus_bairdii
ENSSHAG00000015882	NCBP1	68	70.614	ENSPMAG00000005533	NCBP1	65	70.175	Petromyzon_marinus
ENSSHAG00000015882	NCBP1	73	99.216	ENSPCIG00000015800	NCBP1	70	99.216	Phascolarctos_cinereus
ENSSHAG00000015882	NCBP1	99	55.930	ENSPFOG00000004158	NCBP1	99	56.000	Poecilia_formosa
ENSSHAG00000015882	NCBP1	99	55.960	ENSPLAG00000020002	NCBP1	99	55.779	Poecilia_latipinna
ENSSHAG00000015882	NCBP1	99	56.211	ENSPMEG00000019821	NCBP1	99	56.211	Poecilia_mexicana
ENSSHAG00000015882	NCBP1	73	78.030	ENSPREG00000006035	NCBP1	70	77.273	Poecilia_reticulata
ENSSHAG00000015882	NCBP1	73	95.331	ENSPPYG00000019426	NCBP1	99	61.166	Pongo_abelii
ENSSHAG00000015882	NCBP1	68	79.688	ENSPCAG00000009943	NCBP1	65	81.395	Procavia_capensis
ENSSHAG00000015882	NCBP1	56	95.331	ENSPCOG00000020024	NCBP1	63	95.331	Propithecus_coquereli
ENSSHAG00000015882	NCBP1	73	93.359	ENSPVAG00000005924	NCBP1	69	93.798	Pteropus_vampyrus
ENSSHAG00000015882	NCBP1	62	80.000	ENSPNYG00000002140	NCBP1	64	80.392	Pundamilia_nyererei
ENSSHAG00000015882	NCBP1	72	80.545	ENSPNAG00000027753	NCBP1	70	79.848	Pygocentrus_nattereri
ENSSHAG00000015882	NCBP1	73	93.774	ENSRNOG00000023605	Ncbp1	69	93.798	Rattus_norvegicus
ENSSHAG00000015882	NCBP1	73	95.331	ENSRBIG00000043175	NCBP1	99	61.481	Rhinopithecus_bieti
ENSSHAG00000015882	NCBP1	73	95.331	ENSRROG00000029767	NCBP1	99	61.481	Rhinopithecus_roxellana
ENSSHAG00000015882	NCBP1	73	95.720	ENSSBOG00000019378	NCBP1	69	95.720	Saimiri_boliviensis_boliviensis
ENSSHAG00000015882	NCBP1	98	55.811	ENSSFOG00015001872	NCBP1	99	56.051	Scleropages_formosus
ENSSHAG00000015882	NCBP1	73	76.336	ENSSMAG00000007463	NCBP1	69	75.954	Scophthalmus_maximus
ENSSHAG00000015882	NCBP1	72	80.469	ENSSDUG00000007019	NCBP1	69	80.469	Seriola_dumerili
ENSSHAG00000015882	NCBP1	72	80.153	ENSSLDG00000021924	NCBP1	70	79.771	Seriola_lalandi_dorsalis
ENSSHAG00000015882	NCBP1	63	94.141	ENSSARG00000007274	NCBP1	61	94.186	Sorex_araneus
ENSSHAG00000015882	NCBP1	66	89.062	ENSSPUG00000008609	NCBP1	64	89.535	Sphenodon_punctatus
ENSSHAG00000015882	NCBP1	73	80.153	ENSSPAG00000012550	NCBP1	70	79.771	Stegastes_partitus
ENSSHAG00000015882	NCBP1	99	60.794	ENSSSCG00000005366	NCBP1	99	62.264	Sus_scrofa
ENSSHAG00000015882	NCBP1	63	87.850	ENSTGUG00000001472	NCBP1	60	87.850	Taeniopygia_guttata
ENSSHAG00000015882	NCBP1	72	77.692	ENSTRUG00000005287	NCBP1	69	77.099	Takifugu_rubripes
ENSSHAG00000015882	NCBP1	73	83.594	ENSTBEG00000004035	NCBP1	69	84.109	Tupaia_belangeri
ENSSHAG00000015882	NCBP1	61	95.720	ENSTTRG00000000507	NCBP1	58	95.720	Tursiops_truncatus
ENSSHAG00000015882	NCBP1	73	95.720	ENSUAMG00000005471	NCBP1	69	95.720	Ursus_americanus
ENSSHAG00000015882	NCBP1	70	95.720	ENSUMAG00000011865	NCBP1	70	95.720	Ursus_maritimus
ENSSHAG00000015882	NCBP1	73	95.349	ENSVPAG00000010537	NCBP1	69	95.349	Vicugna_pacos
ENSSHAG00000015882	NCBP1	73	95.720	ENSVVUG00000019725	NCBP1	69	95.720	Vulpes_vulpes
ENSSHAG00000015882	NCBP1	73	84.047	ENSXETG00000010179	ncbp1	70	83.012	Xenopus_tropicalis
ENSSHAG00000015882	NCBP1	99	55.960	ENSXMAG00000018253	NCBP1	99	55.779	Xiphophorus_maculatus