EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSHAG00000016076 (Gene tree)
Gene ID
100916031
Gene Symbol
RBFOX3
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Sarcophilus_harrisii
Status
putative
Strand
Plus strand
Length
52226 bases
Position
chrGL856850.1:2019789-2072014
Accession
27097
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSHAP00000018938Fox-1_CPF12414.83.8e-4511
ENSSHAP00000018937Fox-1_CPF12414.86.6e-4511
ENSSHAP00000018937RRM_1PF00076.221e-1811
ENSSHAP00000018938RRM_1PF00076.225.7e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSHAT00000019094RBFOX3-2023029-ENSSHAP00000018938280 (aa)-G3WU33
ENSSHAT00000019093RBFOX3-2011200-ENSSHAP00000018937399 (aa)-G3WU32
Gene Model
Click here to download ENSSHAG00000016076's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016076's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSHAG00000016076RBFOX39969.403ENSSHAG00000009257RBFOX19868.905
ENSSHAG00000016076RBFOX310059.330ENSSHAG00000006835RBFOX29459.091
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSHAG00000016076RBFOX39583.502ENSG00000167281RBFOX38998.276Homo_sapiens
ENSSHAG00000016076RBFOX39656.190ENSAPOG00000015658-8957.468Acanthochromis_polyacanthus
ENSSHAG00000016076RBFOX310073.482ENSAPOG00000021630rbfox3b8974.581Acanthochromis_polyacanthus
ENSSHAG00000016076RBFOX310083.127ENSAMEG00000014170RBFOX39883.127Ailuropoda_melanoleuca
ENSSHAG00000016076RBFOX39559.177ENSACIG00000003768-9066.764Amphilophus_citrinellus
ENSSHAG00000016076RBFOX310069.010ENSACIG00000010817rbfox3b9569.461Amphilophus_citrinellus
ENSSHAG00000016076RBFOX39567.000ENSAOCG00000010786-8869.837Amphiprion_ocellaris
ENSSHAG00000016076RBFOX310073.482ENSAOCG00000012358rbfox3b8974.581Amphiprion_ocellaris
ENSSHAG00000016076RBFOX310063.898ENSAPEG00000019081rbfox3b8865.651Amphiprion_percula
ENSSHAG00000016076RBFOX38970.474ENSAPEG00000015891-8671.588Amphiprion_percula
ENSSHAG00000016076RBFOX310069.206ENSATEG00000023101-9368.657Anabas_testudineus
ENSSHAG00000016076RBFOX310064.723ENSATEG00000019945rbfox3b9566.391Anabas_testudineus
ENSSHAG00000016076RBFOX310080.511ENSACAG00000016093RBFOX39182.913Anolis_carolinensis
ENSSHAG00000016076RBFOX39582.155ENSANAG00000023457RBFOX39583.283Aotus_nancymaae
ENSSHAG00000016076RBFOX310078.521ENSACLG00000025552-8973.816Astatotilapia_calliptera
ENSSHAG00000016076RBFOX310072.204ENSACLG00000020011rbfox3b9574.622Astatotilapia_calliptera
ENSSHAG00000016076RBFOX310067.834ENSAMXG00000042841rbfox3b9368.994Astyanax_mexicanus
ENSSHAG00000016076RBFOX39578.229ENSAMXG00000037246rbfox3a9874.515Astyanax_mexicanus
ENSSHAG00000016076RBFOX39578.594ENSBTAG00000006280RBFOX39578.594Bos_taurus
ENSSHAG00000016076RBFOX39577.955ENSCJAG00000009563RBFOX39577.955Callithrix_jacchus
ENSSHAG00000016076RBFOX37979.048ENSCAFG00000005547RBFOX310079.299Canis_familiaris
ENSSHAG00000016076RBFOX39578.594ENSCAFG00020008126RBFOX39669.048Canis_lupus_dingo
ENSSHAG00000016076RBFOX39578.275ENSCHIG00000009124RBFOX39278.275Capra_hircus
ENSSHAG00000016076RBFOX39576.752ENSTSYG00000029617RBFOX39578.981Carlito_syrichta
ENSSHAG00000016076RBFOX39578.481ENSCPOG00000021703RBFOX39578.165Cavia_porcellus
ENSSHAG00000016076RBFOX39582.155ENSCCAG00000028450RBFOX39583.283Cebus_capucinus
ENSSHAG00000016076RBFOX39583.502ENSCATG00000018349RBFOX39584.498Cercocebus_atys
ENSSHAG00000016076RBFOX39578.981ENSCLAG00000006449RBFOX39578.662Chinchilla_lanigera
ENSSHAG00000016076RBFOX39583.502ENSCSAG00000002355RBFOX39584.498Chlorocebus_sabaeus
ENSSHAG00000016076RBFOX39976.633ENSCPBG00000010904RBFOX39883.898Chrysemys_picta_bellii
ENSSHAG00000016076RBFOX39583.502ENSCANG00000043120RBFOX39584.498Colobus_angolensis_palliatus
ENSSHAG00000016076RBFOX39574.921ENSCGRG00001019476Rbfox39576.825Cricetulus_griseus_chok1gshd
ENSSHAG00000016076RBFOX39574.921ENSCGRG00000003268Rbfox39576.825Cricetulus_griseus_crigri
ENSSHAG00000016076RBFOX310067.937ENSCSEG00000015567RBFOX39667.662Cynoglossus_semilaevis
ENSSHAG00000016076RBFOX310057.595ENSCSEG00000020606RBFOX38760.423Cynoglossus_semilaevis
ENSSHAG00000016076RBFOX310073.482ENSCVAG00000006882rbfox3b8874.790Cyprinodon_variegatus
ENSSHAG00000016076RBFOX39569.536ENSDARG00000010083rbfox3a9973.961Danio_rerio
ENSSHAG00000016076RBFOX310075.801ENSDARG00000074310rbfox3b9688.021Danio_rerio
ENSSHAG00000016076RBFOX38163.934ENSDNOG00000039391RBFOX38464.470Dasypus_novemcinctus
ENSSHAG00000016076RBFOX39563.782ENSDORG00000005352Rbfox39564.103Dipodomys_ordii
ENSSHAG00000016076RBFOX310063.526ENSEBUG00000002129RBFOX39961.631Eptatretus_burgeri
ENSSHAG00000016076RBFOX38358.594ENSEBUG00000013559RBFOX37159.244Eptatretus_burgeri
ENSSHAG00000016076RBFOX39580.268ENSEASG00005005059RBFOX39583.384Equus_asinus_asinus
ENSSHAG00000016076RBFOX39580.602ENSECAG00000023811RBFOX39583.686Equus_caballus
ENSSHAG00000016076RBFOX38283.099ENSEEUG00000013974RBFOX37288.021Erinaceus_europaeus
ENSSHAG00000016076RBFOX310080.565ENSELUG00000017963rbfox3b9579.104Esox_lucius
ENSSHAG00000016076RBFOX35648.421ENSELUG00000009807-6754.393Esox_lucius
ENSSHAG00000016076RBFOX39582.492ENSFCAG00000002555RBFOX39583.587Felis_catus
ENSSHAG00000016076RBFOX310070.297ENSFALG00000012288RBFOX39870.545Ficedula_albicollis
ENSSHAG00000016076RBFOX39573.101ENSFDAG00000007489RBFOX39572.785Fukomys_damarensis
ENSSHAG00000016076RBFOX310081.560ENSFHEG00000008550rbfox3b9580.224Fundulus_heteroclitus
ENSSHAG00000016076RBFOX310054.972ENSGMOG00000019304-9958.163Gadus_morhua
ENSSHAG00000016076RBFOX39594.717ENSGALG00000032889RBFOX39186.197Gallus_gallus
ENSSHAG00000016076RBFOX39771.475ENSGAFG00000005025rbfox3b8673.112Gambusia_affinis
ENSSHAG00000016076RBFOX39558.453ENSGACG00000002138-9658.824Gasterosteus_aculeatus
ENSSHAG00000016076RBFOX39589.057ENSGAGG00000020025RBFOX39582.927Gopherus_agassizii
ENSSHAG00000016076RBFOX39583.502ENSGGOG00000012546RBFOX39584.498Gorilla_gorilla
ENSSHAG00000016076RBFOX310072.204ENSHBUG00000018099rbfox3b8874.230Haplochromis_burtoni
ENSSHAG00000016076RBFOX310070.476ENSHBUG00000023098-9868.486Haplochromis_burtoni
ENSSHAG00000016076RBFOX39577.673ENSHGLG00000008679RBFOX39577.358Heterocephalus_glaber_female
ENSSHAG00000016076RBFOX39572.956ENSHGLG00100014739RBFOX39665.330Heterocephalus_glaber_male
ENSSHAG00000016076RBFOX39566.107ENSHCOG00000007444RBFOX37669.113Hippocampus_comes
ENSSHAG00000016076RBFOX310060.317ENSHCOG00000001863RBFOX38862.575Hippocampus_comes
ENSSHAG00000016076RBFOX310057.726ENSIPUG00000021966rbfox3b9868.367Ictalurus_punctatus
ENSSHAG00000016076RBFOX39576.384ENSIPUG00000012010rbfox3a9872.576Ictalurus_punctatus
ENSSHAG00000016076RBFOX39569.373ENSSTOG00000026817RBFOX39471.218Ictidomys_tridecemlineatus
ENSSHAG00000016076RBFOX39578.914ENSJJAG00000014167Rbfox39578.914Jaculus_jaculus
ENSSHAG00000016076RBFOX310073.482ENSKMAG00000006726rbfox3b8974.581Kryptolebias_marmoratus
ENSSHAG00000016076RBFOX39581.413ENSLBEG00000022508-8975.487Labrus_bergylta
ENSSHAG00000016076RBFOX310073.163ENSLBEG00000004030rbfox3b9569.369Labrus_bergylta
ENSSHAG00000016076RBFOX39974.065ENSLACG00000018409-10075.810Latimeria_chalumnae
ENSSHAG00000016076RBFOX310070.773ENSLOCG00000012267rbfox3a9879.330Lepisosteus_oculatus
ENSSHAG00000016076RBFOX310079.602ENSLAFG00000016623RBFOX39881.095Loxodonta_africana
ENSSHAG00000016076RBFOX39573.482ENSMFAG00000002247RBFOX39673.670Macaca_fascicularis
ENSSHAG00000016076RBFOX39583.502ENSMMUG00000023028RBFOX39584.498Macaca_mulatta
ENSSHAG00000016076RBFOX39583.165ENSMNEG00000041147RBFOX39584.195Macaca_nemestrina
ENSSHAG00000016076RBFOX39583.502ENSMLEG00000025686RBFOX39584.498Mandrillus_leucophaeus
ENSSHAG00000016076RBFOX310066.501ENSMAMG00000020600-9966.253Mastacembelus_armatus
ENSSHAG00000016076RBFOX310067.846ENSMAMG00000019810rbfox3b9568.278Mastacembelus_armatus
ENSSHAG00000016076RBFOX310072.204ENSMZEG00005000781rbfox3b8974.022Maylandia_zebra
ENSSHAG00000016076RBFOX39549.240ENSMZEG00005003055-7961.721Maylandia_zebra
ENSSHAG00000016076RBFOX35592.202ENSMGAG00000005600RBFOX38392.661Meleagris_gallopavo
ENSSHAG00000016076RBFOX39576.508ENSMAUG00000013543Rbfox39576.190Mesocricetus_auratus
ENSSHAG00000016076RBFOX310081.731ENSMICG00000014898RBFOX39682.979Microcebus_murinus
ENSSHAG00000016076RBFOX39574.522ENSMOCG00000015373Rbfox39576.752Microtus_ochrogaster
ENSSHAG00000016076RBFOX310069.182ENSMMOG00000020193rbfox3b9867.822Mola_mola
ENSSHAG00000016076RBFOX310089.711ENSMODG00000002089RBFOX39090.704Monodelphis_domestica
ENSSHAG00000016076RBFOX310076.254ENSMALG00000020407rbfox3b8973.464Monopterus_albus
ENSSHAG00000016076RBFOX310071.746ENSMALG00000018270-8974.930Monopterus_albus
ENSSHAG00000016076RBFOX39579.530MGP_CAROLIEiJ_G0017487Rbfox39190.260Mus_caroli
ENSSHAG00000016076RBFOX39580.872ENSMUSG00000025576Rbfox39189.610Mus_musculus
ENSSHAG00000016076RBFOX39579.264MGP_PahariEiJ_G0018614Rbfox39190.260Mus_pahari
ENSSHAG00000016076RBFOX39579.195MGP_SPRETEiJ_G0018331Rbfox39190.260Mus_spretus
ENSSHAG00000016076RBFOX310078.155ENSMPUG00000012319RBFOX39878.155Mustela_putorius_furo
ENSSHAG00000016076RBFOX39575.796ENSNGAG00000018006Rbfox39578.025Nannospalax_galili
ENSSHAG00000016076RBFOX310063.376ENSNBRG00000022885-9065.651Neolamprologus_brichardi
ENSSHAG00000016076RBFOX310070.927ENSNBRG00000010102rbfox3b8873.109Neolamprologus_brichardi
ENSSHAG00000016076RBFOX310053.165ENSNLEG00000000153-7992.857Nomascus_leucogenys
ENSSHAG00000016076RBFOX39557.726ENSMEUG00000004218-10059.231Notamacropus_eugenii
ENSSHAG00000016076RBFOX37389.474ENSOPRG00000016279-7989.474Ochotona_princeps
ENSSHAG00000016076RBFOX39583.221ENSODEG00000009433RBFOX39583.939Octodon_degus
ENSSHAG00000016076RBFOX310071.429ENSONIG00000007282-9875.410Oreochromis_niloticus
ENSSHAG00000016076RBFOX310073.482ENSONIG00000009549rbfox3b8874.790Oreochromis_niloticus
ENSSHAG00000016076RBFOX36867.376ENSOCUG00000014217RBFOX37866.667Oryctolagus_cuniculus
ENSSHAG00000016076RBFOX310072.930ENSORLG00000000905rbfox3b7073.816Oryzias_latipes
ENSSHAG00000016076RBFOX310080.919ENSORLG00020018030rbfox3b8979.478Oryzias_latipes_hni
ENSSHAG00000016076RBFOX310080.565ENSORLG00015009200rbfox3b9479.104Oryzias_latipes_hsok
ENSSHAG00000016076RBFOX37478.095ENSOMEG00000014677rbfox3b7676.887Oryzias_melastigma
ENSSHAG00000016076RBFOX310079.250ENSOGAG00000029595RBFOX39779.250Otolemur_garnettii
ENSSHAG00000016076RBFOX310065.423ENSOARG00000002908RBFOX310062.712Ovis_aries
ENSSHAG00000016076RBFOX38776.792ENSPPAG00000025383RBFOX39483.444Pan_paniscus
ENSSHAG00000016076RBFOX39579.479ENSPPRG00000007819RBFOX39579.479Panthera_pardus
ENSSHAG00000016076RBFOX39583.502ENSPTRG00000009727RBFOX39584.498Pan_troglodytes
ENSSHAG00000016076RBFOX39583.502ENSPANG00000019837RBFOX39584.498Papio_anubis
ENSSHAG00000016076RBFOX39583.643ENSPKIG00000010299rbfox3a9270.123Paramormyrops_kingsleyae
ENSSHAG00000016076RBFOX310064.211ENSPKIG00000022633-9256.683Paramormyrops_kingsleyae
ENSSHAG00000016076RBFOX38368.914ENSPMGG00000008000rbfox3b8672.990Periophthalmus_magnuspinnatus
ENSSHAG00000016076RBFOX39575.159ENSPEMG00000010500Rbfox39577.389Peromyscus_maniculatus_bairdii
ENSSHAG00000016076RBFOX35371.605ENSPMAG00000008689rbfox3b9959.623Petromyzon_marinus
ENSSHAG00000016076RBFOX3100100.000ENSPCIG00000005766RBFOX3100100.000Phascolarctos_cinereus
ENSSHAG00000016076RBFOX310073.482ENSPFOG00000018294rbfox3b9267.925Poecilia_formosa
ENSSHAG00000016076RBFOX37965.625ENSPLAG00000000481rbfox3b7964.688Poecilia_latipinna
ENSSHAG00000016076RBFOX310081.560ENSPMEG00000022997rbfox3b9580.224Poecilia_mexicana
ENSSHAG00000016076RBFOX310073.885ENSPREG00000012886rbfox3b9375.140Poecilia_reticulata
ENSSHAG00000016076RBFOX310072.250ENSPPYG00000008704RBFOX310072.250Pongo_abelii
ENSSHAG00000016076RBFOX39566.570ENSPCAG00000001401RBFOX39670.745Procavia_capensis
ENSSHAG00000016076RBFOX310078.659ENSPCOG00000012689RBFOX39773.670Propithecus_coquereli
ENSSHAG00000016076RBFOX39560.870ENSPVAG00000015243RBFOX39665.252Pteropus_vampyrus
ENSSHAG00000016076RBFOX310064.217ENSPNYG00000009079-8765.847Pundamilia_nyererei
ENSSHAG00000016076RBFOX310061.146ENSPNYG00000010414rbfox3b8863.435Pundamilia_nyererei
ENSSHAG00000016076RBFOX39577.860ENSPNAG00000002889rbfox3a8974.033Pygocentrus_nattereri
ENSSHAG00000016076RBFOX310071.429ENSPNAG00000018173rbfox3b8570.677Pygocentrus_nattereri
ENSSHAG00000016076RBFOX39579.264ENSRNOG00000003386Rbfox39582.477Rattus_norvegicus
ENSSHAG00000016076RBFOX39583.502ENSRBIG00000040449RBFOX39184.551Rhinopithecus_bieti
ENSSHAG00000016076RBFOX39583.502ENSRROG00000000766RBFOX39584.498Rhinopithecus_roxellana
ENSSHAG00000016076RBFOX39582.155ENSSBOG00000031591RBFOX39583.283Saimiri_boliviensis_boliviensis
ENSSHAG00000016076RBFOX39581.784ENSSFOG00015023260rbfox3a8984.387Scleropages_formosus
ENSSHAG00000016076RBFOX39568.519ENSSFOG00015004716RBFOX38968.030Scleropages_formosus
ENSSHAG00000016076RBFOX310077.817ENSSMAG00000019052-9571.386Scophthalmus_maximus
ENSSHAG00000016076RBFOX310076.254ENSSMAG00000012618rbfox3b7771.850Scophthalmus_maximus
ENSSHAG00000016076RBFOX310065.672ENSSDUG00000015801-9665.920Seriola_dumerili
ENSSHAG00000016076RBFOX310081.560ENSSDUG00000023183rbfox3b9580.224Seriola_dumerili
ENSSHAG00000016076RBFOX310073.559ENSSLDG00000000149rbfox3b8974.581Seriola_lalandi_dorsalis
ENSSHAG00000016076RBFOX39967.662ENSSLDG00000016098-9868.905Seriola_lalandi_dorsalis
ENSSHAG00000016076RBFOX39588.015ENSSPUG00000011733RBFOX39581.873Sphenodon_punctatus
ENSSHAG00000016076RBFOX38568.726ENSSPAG00000004898-7768.699Stegastes_partitus
ENSSHAG00000016076RBFOX310063.898ENSSPAG00000017571rbfox3b8865.651Stegastes_partitus
ENSSHAG00000016076RBFOX38579.182ENSSSCG00000039498RBFOX39276.716Sus_scrofa
ENSSHAG00000016076RBFOX310068.571ENSTRUG00000004894rbfox3b9766.098Takifugu_rubripes
ENSSHAG00000016076RBFOX310071.642ENSTNIG00000011278rbfox3b9971.144Tetraodon_nigroviridis
ENSSHAG00000016076RBFOX38553.797ENSTBEG00000004296-6064.126Tupaia_belangeri
ENSSHAG00000016076RBFOX39566.279ENSTTRG00000003676RBFOX39667.287Tursiops_truncatus
ENSSHAG00000016076RBFOX39582.492ENSUAMG00000004668RBFOX39583.587Ursus_americanus
ENSSHAG00000016076RBFOX310078.750ENSVVUG00000017864RBFOX39583.891Vulpes_vulpes
ENSSHAG00000016076RBFOX310063.750ENSXETG00000020236rbfox39864.938Xenopus_tropicalis
ENSSHAG00000016076RBFOX310071.975ENSXCOG00000018262rbfox3b9569.091Xiphophorus_couchianus
ENSSHAG00000016076RBFOX310076.000ENSXMAG00000012939rbfox3b9176.056Xiphophorus_maculatus

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