EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000016084 (Gene tree)
Gene ID: 100928952
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 18727 bases
Position: chrGL841484.1:2021945-2040671
Accession: 17631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018948	RNA_pol_I_A49	PF06870.12	1.9e-98	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000019104	POLR1E-201	1146	-	ENSSHAP00000018948	359 (aa)	-	G3WU43

Gene Model

Click here to download ENSSHAG00000016084's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016084	POLR1E	100	70.000	ENSG00000137054	POLR1E	85	70.195	Homo_sapiens
ENSSHAG00000016084	POLR1E	95	43.931	ENSAPOG00000012452	polr1e	81	43.931	Acanthochromis_polyacanthus
ENSSHAG00000016084	POLR1E	100	63.054	ENSAMEG00000010193	POLR1E	84	63.054	Ailuropoda_melanoleuca
ENSSHAG00000016084	POLR1E	95	46.705	ENSACIG00000009884	polr1e	86	46.705	Amphilophus_citrinellus
ENSSHAG00000016084	POLR1E	95	46.667	ENSAOCG00000005665	polr1e	82	46.667	Amphiprion_ocellaris
ENSSHAG00000016084	POLR1E	95	46.377	ENSAPEG00000020581	polr1e	82	46.377	Amphiprion_percula
ENSSHAG00000016084	POLR1E	95	48.696	ENSATEG00000020609	polr1e	82	48.696	Anabas_testudineus
ENSSHAG00000016084	POLR1E	93	55.526	ENSAPLG00000010340	POLR1E	99	55.526	Anas_platyrhynchos
ENSSHAG00000016084	POLR1E	100	71.111	ENSANAG00000038046	POLR1E	85	71.309	Aotus_nancymaae
ENSSHAG00000016084	POLR1E	95	47.126	ENSACLG00000013685	polr1e	82	47.126	Astatotilapia_calliptera
ENSSHAG00000016084	POLR1E	99	44.475	ENSAMXG00000018181	polr1e	86	44.475	Astyanax_mexicanus
ENSSHAG00000016084	POLR1E	99	73.538	ENSBTAG00000012243	POLR1E	85	73.538	Bos_taurus
ENSSHAG00000016084	POLR1E	100	63.889	ENSCJAG00000010512	POLR1E	78	72.381	Callithrix_jacchus
ENSSHAG00000016084	POLR1E	100	71.667	ENSCAFG00000002377	POLR1E	85	71.866	Canis_familiaris
ENSSHAG00000016084	POLR1E	99	72.145	ENSCAFG00020017851	POLR1E	85	72.145	Canis_lupus_dingo
ENSSHAG00000016084	POLR1E	99	72.423	ENSCHIG00000019479	POLR1E	85	72.423	Capra_hircus
ENSSHAG00000016084	POLR1E	99	71.588	ENSTSYG00000002075	POLR1E	85	71.588	Carlito_syrichta
ENSSHAG00000016084	POLR1E	80	71.528	ENSCAPG00000015653	POLR1E	99	71.528	Cavia_aperea
ENSSHAG00000016084	POLR1E	99	71.031	ENSCPOG00000009965	POLR1E	86	71.031	Cavia_porcellus
ENSSHAG00000016084	POLR1E	96	66.860	ENSCCAG00000029460	POLR1E	81	66.860	Cebus_capucinus
ENSSHAG00000016084	POLR1E	99	70.195	ENSCATG00000031732	POLR1E	82	80.702	Cercocebus_atys
ENSSHAG00000016084	POLR1E	85	74.919	ENSCLAG00000012701	POLR1E	80	74.919	Chinchilla_lanigera
ENSSHAG00000016084	POLR1E	99	70.195	ENSCSAG00000010782	POLR1E	85	70.195	Chlorocebus_sabaeus
ENSSHAG00000016084	POLR1E	92	66.967	ENSCHOG00000013024	POLR1E	70	66.967	Choloepus_hoffmanni
ENSSHAG00000016084	POLR1E	96	69.096	ENSCPBG00000006923	POLR1E	83	69.096	Chrysemys_picta_bellii
ENSSHAG00000016084	POLR1E	100	70.278	ENSCANG00000036112	POLR1E	82	78.947	Colobus_angolensis_palliatus
ENSSHAG00000016084	POLR1E	100	68.889	ENSCGRG00001006197	Polr1e	83	68.889	Cricetulus_griseus_chok1gshd
ENSSHAG00000016084	POLR1E	100	68.333	ENSCGRG00000006430	Polr1e	83	68.333	Cricetulus_griseus_crigri
ENSSHAG00000016084	POLR1E	95	44.669	ENSCSEG00000005121	polr1e	83	44.669	Cynoglossus_semilaevis
ENSSHAG00000016084	POLR1E	95	43.804	ENSCVAG00000019759	polr1e	82	43.804	Cyprinodon_variegatus
ENSSHAG00000016084	POLR1E	95	46.821	ENSDARG00000006434	polr1e	87	45.580	Danio_rerio
ENSSHAG00000016084	POLR1E	100	63.570	ENSDNOG00000010257	POLR1E	87	63.570	Dasypus_novemcinctus
ENSSHAG00000016084	POLR1E	96	69.186	ENSETEG00000018204	POLR1E	96	69.186	Echinops_telfairi
ENSSHAG00000016084	POLR1E	70	39.394	ENSEBUG00000010635	-	95	39.394	Eptatretus_burgeri
ENSSHAG00000016084	POLR1E	98	73.521	ENSEASG00005000675	POLR1E	84	73.521	Equus_asinus_asinus
ENSSHAG00000016084	POLR1E	98	73.521	ENSECAG00000014669	POLR1E	84	73.521	Equus_caballus
ENSSHAG00000016084	POLR1E	100	59.167	ENSEEUG00000011928	POLR1E	73	61.449	Erinaceus_europaeus
ENSSHAG00000016084	POLR1E	95	45.507	ENSELUG00000008150	polr1e	82	45.507	Esox_lucius
ENSSHAG00000016084	POLR1E	99	71.309	ENSFCAG00000013081	POLR1E	85	71.309	Felis_catus
ENSSHAG00000016084	POLR1E	99	62.849	ENSFALG00000012950	POLR1E	90	62.849	Ficedula_albicollis
ENSSHAG00000016084	POLR1E	99	71.031	ENSFDAG00000016917	POLR1E	86	71.031	Fukomys_damarensis
ENSSHAG00000016084	POLR1E	95	43.478	ENSFHEG00000009801	polr1e	82	43.478	Fundulus_heteroclitus
ENSSHAG00000016084	POLR1E	95	36.311	ENSGMOG00000003336	POLR1E	81	36.311	Gadus_morhua
ENSSHAG00000016084	POLR1E	99	61.732	ENSGALG00000005395	POLR1E	86	61.732	Gallus_gallus
ENSSHAG00000016084	POLR1E	95	43.478	ENSGAFG00000004850	polr1e	82	43.478	Gambusia_affinis
ENSSHAG00000016084	POLR1E	96	43.626	ENSGACG00000016087	polr1e	83	43.626	Gasterosteus_aculeatus
ENSSHAG00000016084	POLR1E	99	58.427	ENSGAGG00000001659	POLR1E	87	57.584	Gopherus_agassizii
ENSSHAG00000016084	POLR1E	100	70.000	ENSGGOG00000001882	POLR1E	83	80.702	Gorilla_gorilla
ENSSHAG00000016084	POLR1E	95	47.714	ENSHBUG00000002559	polr1e	82	47.701	Haplochromis_burtoni
ENSSHAG00000016084	POLR1E	96	72.174	ENSHGLG00000002036	POLR1E	82	72.174	Heterocephalus_glaber_female
ENSSHAG00000016084	POLR1E	96	72.464	ENSHGLG00100012784	POLR1E	82	72.464	Heterocephalus_glaber_male
ENSSHAG00000016084	POLR1E	95	44.058	ENSHCOG00000002774	polr1e	82	44.348	Hippocampus_comes
ENSSHAG00000016084	POLR1E	99	42.936	ENSIPUG00000003019	polr1e	86	42.936	Ictalurus_punctatus
ENSSHAG00000016084	POLR1E	96	72.334	ENSSTOG00000009810	POLR1E	83	72.334	Ictidomys_tridecemlineatus
ENSSHAG00000016084	POLR1E	99	69.081	ENSJJAG00000020731	Polr1e	82	69.081	Jaculus_jaculus
ENSSHAG00000016084	POLR1E	97	43.296	ENSKMAG00000000046	polr1e	85	43.296	Kryptolebias_marmoratus
ENSSHAG00000016084	POLR1E	95	47.661	ENSLBEG00000003104	polr1e	81	47.661	Labrus_bergylta
ENSSHAG00000016084	POLR1E	99	62.155	ENSLACG00000003416	POLR1E	99	62.155	Latimeria_chalumnae
ENSSHAG00000016084	POLR1E	96	53.623	ENSLOCG00000012859	polr1e	82	53.623	Lepisosteus_oculatus
ENSSHAG00000016084	POLR1E	96	74.203	ENSLAFG00000012831	POLR1E	82	74.203	Loxodonta_africana
ENSSHAG00000016084	POLR1E	100	70.278	ENSMFAG00000045465	POLR1E	82	80.702	Macaca_fascicularis
ENSSHAG00000016084	POLR1E	99	70.474	ENSMMUG00000017892	POLR1E	82	80.702	Macaca_mulatta
ENSSHAG00000016084	POLR1E	100	63.957	ENSMNEG00000040283	POLR1E	82	68.584	Macaca_nemestrina
ENSSHAG00000016084	POLR1E	99	70.474	ENSMLEG00000031135	POLR1E	82	80.702	Mandrillus_leucophaeus
ENSSHAG00000016084	POLR1E	95	44.348	ENSMAMG00000001260	polr1e	82	44.348	Mastacembelus_armatus
ENSSHAG00000016084	POLR1E	95	47.414	ENSMZEG00005021536	polr1e	82	47.414	Maylandia_zebra
ENSSHAG00000016084	POLR1E	99	68.245	ENSMAUG00000021044	Polr1e	82	68.245	Mesocricetus_auratus
ENSSHAG00000016084	POLR1E	99	72.702	ENSMICG00000003673	POLR1E	85	72.702	Microcebus_murinus
ENSSHAG00000016084	POLR1E	100	68.889	ENSMOCG00000012920	Polr1e	83	68.889	Microtus_ochrogaster
ENSSHAG00000016084	POLR1E	95	45.087	ENSMMOG00000007391	polr1e	84	45.087	Mola_mola
ENSSHAG00000016084	POLR1E	98	90.057	ENSMODG00000002884	POLR1E	86	90.057	Monodelphis_domestica
ENSSHAG00000016084	POLR1E	95	44.348	ENSMALG00000002665	polr1e	82	44.348	Monopterus_albus
ENSSHAG00000016084	POLR1E	100	67.409	MGP_CAROLIEiJ_G0025967	Polr1e	88	67.409	Mus_caroli
ENSSHAG00000016084	POLR1E	100	68.056	ENSMUSG00000028318	Polr1e	88	68.056	Mus_musculus
ENSSHAG00000016084	POLR1E	99	69.081	MGP_PahariEiJ_G0024114	Polr1e	88	69.081	Mus_pahari
ENSSHAG00000016084	POLR1E	100	67.778	MGP_SPRETEiJ_G0026930	Polr1e	88	67.778	Mus_spretus
ENSSHAG00000016084	POLR1E	100	64.146	ENSMPUG00000006040	POLR1E	87	63.902	Mustela_putorius_furo
ENSSHAG00000016084	POLR1E	100	70.833	ENSMLUG00000012688	POLR1E	83	70.833	Myotis_lucifugus
ENSSHAG00000016084	POLR1E	99	70.752	ENSNGAG00000002520	Polr1e	82	70.752	Nannospalax_galili
ENSSHAG00000016084	POLR1E	95	47.701	ENSNBRG00000016822	polr1e	82	47.701	Neolamprologus_brichardi
ENSSHAG00000016084	POLR1E	100	70.278	ENSNLEG00000003616	POLR1E	82	80.702	Nomascus_leucogenys
ENSSHAG00000016084	POLR1E	75	92.500	ENSMEUG00000015372	-	71	92.500	Notamacropus_eugenii
ENSSHAG00000016084	POLR1E	100	62.117	ENSOPRG00000014206	POLR1E	100	62.117	Ochotona_princeps
ENSSHAG00000016084	POLR1E	99	72.145	ENSODEG00000014565	POLR1E	83	72.145	Octodon_degus
ENSSHAG00000016084	POLR1E	95	48.000	ENSONIG00000008921	polr1e	82	47.989	Oreochromis_niloticus
ENSSHAG00000016084	POLR1E	96	72.174	ENSOCUG00000024773	POLR1E	82	72.174	Oryctolagus_cuniculus
ENSSHAG00000016084	POLR1E	95	45.665	ENSORLG00000005143	polr1e	82	45.665	Oryzias_latipes
ENSSHAG00000016084	POLR1E	95	45.690	ENSORLG00020007271	polr1e	88	45.690	Oryzias_latipes_hni
ENSSHAG00000016084	POLR1E	95	45.376	ENSORLG00015000137	polr1e	82	45.376	Oryzias_latipes_hsok
ENSSHAG00000016084	POLR1E	95	43.642	ENSOMEG00000013264	polr1e	81	43.642	Oryzias_melastigma
ENSSHAG00000016084	POLR1E	99	72.145	ENSOGAG00000012981	POLR1E	83	72.145	Otolemur_garnettii
ENSSHAG00000016084	POLR1E	99	72.702	ENSOARG00000011465	POLR1E	82	72.702	Ovis_aries
ENSSHAG00000016084	POLR1E	100	70.278	ENSPPAG00000034566	POLR1E	82	80.702	Pan_paniscus
ENSSHAG00000016084	POLR1E	96	73.913	ENSPPRG00000005649	POLR1E	82	73.913	Panthera_pardus
ENSSHAG00000016084	POLR1E	96	74.203	ENSPTIG00000009774	POLR1E	82	74.203	Panthera_tigris_altaica
ENSSHAG00000016084	POLR1E	100	70.278	ENSPTRG00000020944	POLR1E	82	80.702	Pan_troglodytes
ENSSHAG00000016084	POLR1E	99	70.474	ENSPANG00000025563	POLR1E	82	80.702	Papio_anubis
ENSSHAG00000016084	POLR1E	99	43.646	ENSPKIG00000003562	polr1e	86	43.526	Paramormyrops_kingsleyae
ENSSHAG00000016084	POLR1E	96	63.557	ENSPSIG00000003274	POLR1E	80	63.557	Pelodiscus_sinensis
ENSSHAG00000016084	POLR1E	96	45.087	ENSPMGG00000024169	polr1e	83	45.087	Periophthalmus_magnuspinnatus
ENSSHAG00000016084	POLR1E	99	54.494	ENSPEMG00000022300	-	80	54.494	Peromyscus_maniculatus_bairdii
ENSSHAG00000016084	POLR1E	99	68.820	ENSPEMG00000019151	-	82	68.820	Peromyscus_maniculatus_bairdii
ENSSHAG00000016084	POLR1E	98	92.351	ENSPCIG00000014798	POLR1E	86	92.351	Phascolarctos_cinereus
ENSSHAG00000016084	POLR1E	95	41.823	ENSPFOG00000019627	polr1e	83	41.823	Poecilia_formosa
ENSSHAG00000016084	POLR1E	95	44.058	ENSPLAG00000022679	polr1e	82	44.058	Poecilia_latipinna
ENSSHAG00000016084	POLR1E	95	44.348	ENSPMEG00000022123	polr1e	89	44.348	Poecilia_mexicana
ENSSHAG00000016084	POLR1E	95	44.058	ENSPREG00000009470	polr1e	83	44.058	Poecilia_reticulata
ENSSHAG00000016084	POLR1E	100	70.278	ENSPPYG00000019061	POLR1E	86	70.278	Pongo_abelii
ENSSHAG00000016084	POLR1E	62	73.303	ENSPCAG00000004891	POLR1E	73	73.303	Procavia_capensis
ENSSHAG00000016084	POLR1E	99	71.309	ENSPCOG00000027448	POLR1E	85	71.309	Propithecus_coquereli
ENSSHAG00000016084	POLR1E	100	71.944	ENSPVAG00000007940	POLR1E	76	72.222	Pteropus_vampyrus
ENSSHAG00000016084	POLR1E	95	47.414	ENSPNYG00000001032	polr1e	82	47.414	Pundamilia_nyererei
ENSSHAG00000016084	POLR1E	99	42.192	ENSPNAG00000006987	polr1e	86	42.192	Pygocentrus_nattereri
ENSSHAG00000016084	POLR1E	100	68.056	ENSRNOG00000012664	Polr1e	83	68.056	Rattus_norvegicus
ENSSHAG00000016084	POLR1E	100	70.278	ENSRBIG00000034214	POLR1E	94	70.474	Rhinopithecus_bieti
ENSSHAG00000016084	POLR1E	99	70.474	ENSRROG00000031986	POLR1E	82	80.702	Rhinopithecus_roxellana
ENSSHAG00000016084	POLR1E	99	71.309	ENSSBOG00000021415	POLR1E	85	71.309	Saimiri_boliviensis_boliviensis
ENSSHAG00000016084	POLR1E	98	46.797	ENSSFOG00015002293	polr1e	86	46.797	Scleropages_formosus
ENSSHAG00000016084	POLR1E	95	47.714	ENSSMAG00000011672	polr1e	77	47.714	Scophthalmus_maximus
ENSSHAG00000016084	POLR1E	95	46.377	ENSSDUG00000022279	polr1e	82	46.377	Seriola_dumerili
ENSSHAG00000016084	POLR1E	95	46.377	ENSSLDG00000024918	polr1e	82	46.377	Seriola_lalandi_dorsalis
ENSSHAG00000016084	POLR1E	65	62.931	ENSSARG00000009810	-	58	62.931	Sorex_araneus
ENSSHAG00000016084	POLR1E	100	65.460	ENSSPUG00000009499	POLR1E	86	65.460	Sphenodon_punctatus
ENSSHAG00000016084	POLR1E	95	47.536	ENSSPAG00000021240	polr1e	82	47.536	Stegastes_partitus
ENSSHAG00000016084	POLR1E	100	71.944	ENSSSCG00000005347	POLR1E	86	71.944	Sus_scrofa
ENSSHAG00000016084	POLR1E	99	54.545	ENSTGUG00000007169	POLR1E	92	54.545	Taeniopygia_guttata
ENSSHAG00000016084	POLR1E	95	44.828	ENSTRUG00000020779	polr1e	91	44.828	Takifugu_rubripes
ENSSHAG00000016084	POLR1E	95	45.087	ENSTNIG00000017812	polr1e	82	45.087	Tetraodon_nigroviridis
ENSSHAG00000016084	POLR1E	100	72.500	ENSTBEG00000013786	POLR1E	76	72.500	Tupaia_belangeri
ENSSHAG00000016084	POLR1E	98	73.743	ENSTTRG00000008294	POLR1E	76	73.743	Tursiops_truncatus
ENSSHAG00000016084	POLR1E	100	72.500	ENSUAMG00000012474	POLR1E	84	74.675	Ursus_americanus
ENSSHAG00000016084	POLR1E	100	72.500	ENSUMAG00000011496	POLR1E	86	72.500	Ursus_maritimus
ENSSHAG00000016084	POLR1E	78	75.714	ENSVPAG00000009048	POLR1E	66	75.714	Vicugna_pacos
ENSSHAG00000016084	POLR1E	99	71.866	ENSVVUG00000019954	POLR1E	85	71.866	Vulpes_vulpes
ENSSHAG00000016084	POLR1E	96	52.738	ENSXETG00000006533	polr1e	83	52.738	Xenopus_tropicalis
ENSSHAG00000016084	POLR1E	95	43.478	ENSXCOG00000013706	polr1e	82	43.478	Xiphophorus_couchianus
ENSSHAG00000016084	POLR1E	95	44.348	ENSXMAG00000012484	polr1e	82	44.348	Xiphophorus_maculatus