EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000016087 (Gene tree)
Gene ID: 100915566
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 26047 bases
Position: chrGL841346.1:2023950-2049996
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018951	zf-RanBP	PF00641.18	3.8e-41	1	4
ENSSHAP00000018951	zf-RanBP	PF00641.18	3.8e-41	2	4
ENSSHAP00000018951	zf-RanBP	PF00641.18	3.8e-41	3	4
ENSSHAP00000018951	zf-RanBP	PF00641.18	3.8e-41	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000019107	-	2977	-	ENSSHAP00000018951	938 (aa)	-	G3WU46

Gene Model

Click here to download ENSSHAG00000016087's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016087	-	97	68.277	ENSG00000124789	NUP153	61	68.716	Homo_sapiens
ENSSHAG00000016087	-	65	44.262	ENSAPOG00000019495	nup153	65	40.154	Acanthochromis_polyacanthus
ENSSHAG00000016087	-	96	69.613	ENSAMEG00000000721	NUP153	61	70.395	Ailuropoda_melanoleuca
ENSSHAG00000016087	-	74	42.698	ENSACIG00000010784	nup153	65	39.200	Amphilophus_citrinellus
ENSSHAG00000016087	-	94	38.454	ENSAOCG00000007098	nup153	63	39.442	Amphiprion_ocellaris
ENSSHAG00000016087	-	94	39.412	ENSAPEG00000012075	nup153	64	40.860	Amphiprion_percula
ENSSHAG00000016087	-	65	46.512	ENSATEG00000014134	nup153	60	40.518	Anabas_testudineus
ENSSHAG00000016087	-	97	54.477	ENSACAG00000004118	NUP153	63	55.651	Anolis_carolinensis
ENSSHAG00000016087	-	97	68.277	ENSANAG00000001808	NUP153	63	67.707	Aotus_nancymaae
ENSSHAG00000016087	-	95	39.257	ENSACLG00000016592	nup153	63	40.198	Astatotilapia_calliptera
ENSSHAG00000016087	-	94	34.836	ENSAMXG00000021025	nup153	61	39.085	Astyanax_mexicanus
ENSSHAG00000016087	-	97	68.207	ENSBTAG00000017128	NUP153	64	67.454	Bos_taurus
ENSSHAG00000016087	-	97	68.386	ENSCJAG00000006685	NUP153	62	67.742	Callithrix_jacchus
ENSSHAG00000016087	-	97	69.441	ENSCAFG00000010146	NUP153	67	69.551	Canis_familiaris
ENSSHAG00000016087	-	97	69.484	ENSCAFG00020010901	NUP153	63	69.594	Canis_lupus_dingo
ENSSHAG00000016087	-	97	67.912	ENSCHIG00000023764	NUP153	62	67.132	Capra_hircus
ENSSHAG00000016087	-	98	67.208	ENSTSYG00000001251	NUP153	63	66.845	Carlito_syrichta
ENSSHAG00000016087	-	97	67.398	ENSCPOG00000004007	NUP153	60	67.398	Cavia_porcellus
ENSSHAG00000016087	-	91	67.836	ENSCCAG00000024038	NUP153	75	66.627	Cebus_capucinus
ENSSHAG00000016087	-	97	68.647	ENSCATG00000041429	NUP153	61	69.087	Cercocebus_atys
ENSSHAG00000016087	-	97	66.484	ENSCLAG00000001915	NUP153	61	66.374	Chinchilla_lanigera
ENSSHAG00000016087	-	97	68.606	ENSCSAG00000007624	NUP153	61	69.045	Chlorocebus_sabaeus
ENSSHAG00000016087	-	97	47.346	ENSCHOG00000008316	-	70	46.939	Choloepus_hoffmanni
ENSSHAG00000016087	-	74	56.240	ENSCHOG00000013388	-	74	56.564	Choloepus_hoffmanni
ENSSHAG00000016087	-	97	46.479	ENSCHOG00000003510	-	70	46.831	Choloepus_hoffmanni
ENSSHAG00000016087	-	79	44.726	ENSCHOG00000009608	-	79	44.459	Choloepus_hoffmanni
ENSSHAG00000016087	-	98	47.154	ENSCHOG00000007137	-	77	47.261	Choloepus_hoffmanni
ENSSHAG00000016087	-	97	66.850	ENSCPBG00000008333	NUP153	60	66.191	Chrysemys_picta_bellii
ENSSHAG00000016087	-	97	67.728	ENSCANG00000033390	NUP153	63	68.057	Colobus_angolensis_palliatus
ENSSHAG00000016087	-	97	66.557	ENSCGRG00001021016	Nup153	61	67.107	Cricetulus_griseus_chok1gshd
ENSSHAG00000016087	-	97	66.557	ENSCGRG00000009244	Nup153	62	66.997	Cricetulus_griseus_crigri
ENSSHAG00000016087	-	95	39.006	ENSCSEG00000017912	nup153	61	38.971	Cynoglossus_semilaevis
ENSSHAG00000016087	-	95	38.648	ENSCVAG00000020646	nup153	67	40.578	Cyprinodon_variegatus
ENSSHAG00000016087	-	96	39.309	ENSDARG00000099972	nup153	61	39.809	Danio_rerio
ENSSHAG00000016087	-	97	68.167	ENSDNOG00000001153	NUP153	61	68.277	Dasypus_novemcinctus
ENSSHAG00000016087	-	97	67.470	ENSDORG00000001736	Nup153	61	67.798	Dipodomys_ordii
ENSSHAG00000016087	-	96	61.538	ENSETEG00000010324	-	56	61.538	Echinops_telfairi
ENSSHAG00000016087	-	97	69.857	ENSEASG00005009945	NUP153	64	69.073	Equus_asinus_asinus
ENSSHAG00000016087	-	97	69.923	ENSECAG00000016010	NUP153	63	69.140	Equus_caballus
ENSSHAG00000016087	-	94	40.085	ENSELUG00000019108	nup153	61	40.385	Esox_lucius
ENSSHAG00000016087	-	97	68.484	ENSFCAG00000011583	NUP153	62	67.201	Felis_catus
ENSSHAG00000016087	-	97	56.087	ENSFALG00000013388	NUP153	65	55.867	Ficedula_albicollis
ENSSHAG00000016087	-	92	39.414	ENSGMOG00000010422	nup153	62	40.721	Gadus_morhua
ENSSHAG00000016087	-	97	60.703	ENSGALG00000012720	NUP153	60	60.812	Gallus_gallus
ENSSHAG00000016087	-	95	38.374	ENSGAFG00000010927	nup153	62	38.595	Gambusia_affinis
ENSSHAG00000016087	-	89	39.387	ENSGACG00000005389	nup153	61	39.067	Gasterosteus_aculeatus
ENSSHAG00000016087	-	97	66.338	ENSGAGG00000022386	NUP153	61	65.789	Gopherus_agassizii
ENSSHAG00000016087	-	97	67.544	ENSGGOG00000014261	NUP153	62	66.702	Gorilla_gorilla
ENSSHAG00000016087	-	83	42.909	ENSHBUG00000002944	nup153	62	40.079	Haplochromis_burtoni
ENSSHAG00000016087	-	97	66.375	ENSHGLG00000007924	NUP153	61	66.520	Heterocephalus_glaber_female
ENSSHAG00000016087	-	97	66.375	ENSHGLG00100001529	NUP153	61	66.520	Heterocephalus_glaber_male
ENSSHAG00000016087	-	92	34.979	ENSHCOG00000019361	nup153	62	36.831	Hippocampus_comes
ENSSHAG00000016087	-	96	38.382	ENSIPUG00000014605	nup153	61	40.391	Ictalurus_punctatus
ENSSHAG00000016087	-	97	66.557	ENSSTOG00000005807	NUP153	62	66.557	Ictidomys_tridecemlineatus
ENSSHAG00000016087	-	96	64.790	ENSJJAG00000016760	Nup153	61	66.483	Jaculus_jaculus
ENSSHAG00000016087	-	80	42.494	ENSKMAG00000006344	nup153	65	40.256	Kryptolebias_marmoratus
ENSSHAG00000016087	-	95	39.322	ENSLBEG00000002982	nup153	62	40.947	Labrus_bergylta
ENSSHAG00000016087	-	93	44.322	ENSLACG00000006480	NUP153	69	44.385	Latimeria_chalumnae
ENSSHAG00000016087	-	95	44.633	ENSLOCG00000008267	nup153	61	44.792	Lepisosteus_oculatus
ENSSHAG00000016087	-	98	67.896	ENSLAFG00000015905	NUP153	62	68.065	Loxodonta_africana
ENSSHAG00000016087	-	97	68.496	ENSMFAG00000045732	NUP153	61	69.045	Macaca_fascicularis
ENSSHAG00000016087	-	97	68.496	ENSMMUG00000001993	NUP153	61	69.045	Macaca_mulatta
ENSSHAG00000016087	-	97	68.606	ENSMNEG00000038011	NUP153	61	69.045	Macaca_nemestrina
ENSSHAG00000016087	-	97	68.977	ENSMLEG00000030776	NUP153	62	68.410	Mandrillus_leucophaeus
ENSSHAG00000016087	-	65	45.271	ENSMAMG00000013184	nup153	64	39.376	Mastacembelus_armatus
ENSSHAG00000016087	-	95	38.398	ENSMZEG00005004371	nup153	62	39.471	Maylandia_zebra
ENSSHAG00000016087	-	97	59.760	ENSMGAG00000003139	NUP153	62	60.000	Meleagris_gallopavo
ENSSHAG00000016087	-	97	65.792	ENSMAUG00000007737	Nup153	64	66.376	Mesocricetus_auratus
ENSSHAG00000016087	-	97	69.341	ENSMICG00000006089	NUP153	61	69.890	Microcebus_murinus
ENSSHAG00000016087	-	97	66.300	ENSMOCG00000007623	Nup153	60	65.859	Microtus_ochrogaster
ENSSHAG00000016087	-	58	43.243	ENSMMOG00000019049	nup153	58	36.713	Mola_mola
ENSSHAG00000016087	-	97	86.659	ENSMODG00000010951	NUP153	63	85.961	Monodelphis_domestica
ENSSHAG00000016087	-	69	42.537	ENSMALG00000013995	nup153	61	38.907	Monopterus_albus
ENSSHAG00000016087	-	97	65.677	MGP_CAROLIEiJ_G0018483	Nup153	61	65.498	Mus_caroli
ENSSHAG00000016087	-	97	66.337	ENSMUSG00000021374	Nup153	98	50.674	Mus_musculus
ENSSHAG00000016087	-	97	65.237	MGP_PahariEiJ_G0019551	Nup153	61	65.498	Mus_pahari
ENSSHAG00000016087	-	97	66.007	MGP_SPRETEiJ_G0019363	Nup153	61	65.827	Mus_spretus
ENSSHAG00000016087	-	97	64.594	ENSMLUG00000004775	NUP153	63	63.326	Myotis_lucifugus
ENSSHAG00000016087	-	97	65.567	ENSNGAG00000013817	Nup153	61	65.677	Nannospalax_galili
ENSSHAG00000016087	-	95	37.173	ENSNBRG00000012456	nup153	60	38.349	Neolamprologus_brichardi
ENSSHAG00000016087	-	97	68.716	ENSNLEG00000001141	NUP153	61	69.155	Nomascus_leucogenys
ENSSHAG00000016087	-	90	88.294	ENSMEUG00000012874	NUP153	54	88.294	Notamacropus_eugenii
ENSSHAG00000016087	-	97	65.642	ENSODEG00000005620	NUP153	63	65.642	Octodon_degus
ENSSHAG00000016087	-	95	40.530	ENSONIG00000002524	nup153	63	40.872	Oreochromis_niloticus
ENSSHAG00000016087	-	96	66.848	ENSOANG00000011858	NUP153	62	67.939	Ornithorhynchus_anatinus
ENSSHAG00000016087	-	97	66.703	ENSOCUG00000003064	NUP153	61	67.325	Oryctolagus_cuniculus
ENSSHAG00000016087	-	97	37.958	ENSORLG00000012674	nup153	67	38.928	Oryzias_latipes
ENSSHAG00000016087	-	96	39.979	ENSORLG00020006026	nup153	62	38.347	Oryzias_latipes_hni
ENSSHAG00000016087	-	96	39.490	ENSORLG00015013823	nup153	64	39.450	Oryzias_latipes_hsok
ENSSHAG00000016087	-	65	45.581	ENSOMEG00000012062	nup153	66	39.825	Oryzias_melastigma
ENSSHAG00000016087	-	97	66.561	ENSOGAG00000014899	NUP153	62	67.304	Otolemur_garnettii
ENSSHAG00000016087	-	97	67.358	ENSOARG00000011514	NUP153	63	66.844	Ovis_aries
ENSSHAG00000016087	-	97	68.716	ENSPPAG00000029729	NUP153	61	69.155	Pan_paniscus
ENSSHAG00000016087	-	97	68.013	ENSPPRG00000006160	NUP153	65	67.059	Panthera_pardus
ENSSHAG00000016087	-	97	67.904	ENSPTIG00000017212	NUP153	62	66.952	Panthera_tigris_altaica
ENSSHAG00000016087	-	97	68.606	ENSPTRG00000017752	NUP153	61	69.045	Pan_troglodytes
ENSSHAG00000016087	-	97	68.277	ENSPANG00000015139	NUP153	61	68.825	Papio_anubis
ENSSHAG00000016087	-	93	40.713	ENSPKIG00000001734	nup153	54	40.977	Paramormyrops_kingsleyae
ENSSHAG00000016087	-	97	63.388	ENSPSIG00000017226	NUP153	62	64.153	Pelodiscus_sinensis
ENSSHAG00000016087	-	94	38.743	ENSPMGG00000001716	nup153	63	38.780	Periophthalmus_magnuspinnatus
ENSSHAG00000016087	-	97	65.419	ENSPEMG00000020772	Nup153	61	65.897	Peromyscus_maniculatus_bairdii
ENSSHAG00000016087	-	64	54.054	ENSPMAG00000002487	-	68	34.669	Petromyzon_marinus
ENSSHAG00000016087	-	97	92.189	ENSPCIG00000029680	NUP153	62	90.000	Phascolarctos_cinereus
ENSSHAG00000016087	-	96	39.641	ENSPFOG00000013146	nup153	62	40.702	Poecilia_formosa
ENSSHAG00000016087	-	96	39.623	ENSPMEG00000021677	nup153	62	39.940	Poecilia_mexicana
ENSSHAG00000016087	-	96	39.780	ENSPREG00000007463	nup153	62	39.960	Poecilia_reticulata
ENSSHAG00000016087	-	97	65.642	ENSPPYG00000016259	NUP153	60	66.191	Pongo_abelii
ENSSHAG00000016087	-	97	65.495	ENSPCOG00000014488	NUP153	68	64.801	Propithecus_coquereli
ENSSHAG00000016087	-	97	66.411	ENSPVAG00000012632	NUP153	66	66.058	Pteropus_vampyrus
ENSSHAG00000016087	-	95	39.492	ENSPNYG00000011225	nup153	62	39.920	Pundamilia_nyererei
ENSSHAG00000016087	-	94	40.541	ENSPNAG00000024377	nup153	64	39.960	Pygocentrus_nattereri
ENSSHAG00000016087	-	97	65.899	ENSRNOG00000001456	Nup153	61	66.118	Rattus_norvegicus
ENSSHAG00000016087	-	97	66.374	ENSRBIG00000041878	NUP153	61	66.703	Rhinopithecus_bieti
ENSSHAG00000016087	-	97	68.462	ENSRROG00000029849	NUP153	62	68.791	Rhinopithecus_roxellana
ENSSHAG00000016087	-	97	68.277	ENSSBOG00000024532	NUP153	62	67.849	Saimiri_boliviensis_boliviensis
ENSSHAG00000016087	-	99	40.282	ENSSFOG00015011040	nup153	63	37.303	Scleropages_formosus
ENSSHAG00000016087	-	96	37.700	ENSSMAG00000008418	nup153	63	37.754	Scophthalmus_maximus
ENSSHAG00000016087	-	65	46.656	ENSSDUG00000010779	nup153	62	40.559	Seriola_dumerili
ENSSHAG00000016087	-	65	43.541	ENSSLDG00000012692	nup153	60	39.353	Seriola_lalandi_dorsalis
ENSSHAG00000016087	-	98	57.128	ENSSARG00000013269	NUP153	64	57.465	Sorex_araneus
ENSSHAG00000016087	-	97	61.826	ENSSPUG00000016687	NUP153	60	62.308	Sphenodon_punctatus
ENSSHAG00000016087	-	75	43.834	ENSSPAG00000014945	nup153	62	40.524	Stegastes_partitus
ENSSHAG00000016087	-	97	68.352	ENSSSCG00000026034	NUP153	64	67.707	Sus_scrofa
ENSSHAG00000016087	-	97	55.943	ENSTGUG00000005917	NUP153	64	55.520	Taeniopygia_guttata
ENSSHAG00000016087	-	97	38.687	ENSTRUG00000010163	nup153	62	39.437	Takifugu_rubripes
ENSSHAG00000016087	-	96	38.017	ENSTNIG00000009182	nup153	68	39.474	Tetraodon_nigroviridis
ENSSHAG00000016087	-	65	67.320	ENSUAMG00000015215	NUP153	66	67.742	Ursus_americanus
ENSSHAG00000016087	-	97	69.408	ENSUMAG00000017135	NUP153	74	69.846	Ursus_maritimus
ENSSHAG00000016087	-	98	69.664	ENSVPAG00000002072	NUP153	62	69.280	Vicugna_pacos
ENSSHAG00000016087	-	97	69.551	ENSVVUG00000003265	NUP153	67	69.660	Vulpes_vulpes
ENSSHAG00000016087	-	97	42.779	ENSXETG00000014197	nup153	69	42.232	Xenopus_tropicalis
ENSSHAG00000016087	-	96	38.742	ENSXCOG00000020098	nup153	62	39.671	Xiphophorus_couchianus
ENSSHAG00000016087	-	96	39.899	ENSXMAG00000003437	nup153	62	35.673	Xiphophorus_maculatus