EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000016107 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 9626 bases
Position: chrGL849782.1:2032202-2041827
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000018976	RRM_1	PF00076.22	1.4e-30	1	2
ENSSHAP00000018976	RRM_1	PF00076.22	1.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000019132	-	1392	-	ENSSHAP00000018976	463 (aa)	-	G3WU71

Gene Model

Click here to download ENSSHAG00000016107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016107's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000016107	-	97	54.788	ENSSHAG00000010195	NONO	78	64.567
ENSSHAG00000016107	-	80	62.169	ENSSHAG00000004696	PSPC1	90	55.649
ENSSHAG00000016107	-	79	87.738	ENSSHAG00000012312	-	100	87.466

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016107	-	97	90.200	ENSG00000116560	SFPQ	97	93.548	Homo_sapiens
ENSSHAG00000016107	-	96	70.759	ENSAPOG00000024257	sfpq	61	72.098	Acanthochromis_polyacanthus
ENSSHAG00000016107	-	97	90.200	ENSAMEG00000000815	SFPQ	98	90.869	Ailuropoda_melanoleuca
ENSSHAG00000016107	-	99	68.035	ENSACIG00000000905	sfpq	72	68.202	Amphilophus_citrinellus
ENSSHAG00000016107	-	96	70.759	ENSAOCG00000002889	sfpq	56	77.403	Amphiprion_ocellaris
ENSSHAG00000016107	-	96	70.759	ENSAPEG00000016556	sfpq	56	77.403	Amphiprion_percula
ENSSHAG00000016107	-	96	71.875	ENSATEG00000002981	sfpq	63	78.182	Anabas_testudineus
ENSSHAG00000016107	-	79	68.478	ENSANAG00000037798	-	99	68.207	Aotus_nancymaae
ENSSHAG00000016107	-	79	66.398	ENSANAG00000021268	-	100	65.854	Aotus_nancymaae
ENSSHAG00000016107	-	97	76.339	ENSANAG00000027438	-	66	76.339	Aotus_nancymaae
ENSSHAG00000016107	-	96	69.420	ENSACLG00000022332	sfpq	58	75.584	Astatotilapia_calliptera
ENSSHAG00000016107	-	96	66.964	ENSAMXG00000011538	sfpq	64	70.089	Astyanax_mexicanus
ENSSHAG00000016107	-	97	90.646	ENSBTAG00000016328	SFPQ	58	95.607	Bos_taurus
ENSSHAG00000016107	-	58	47.584	WBGene00017778	nono-1	67	47.012	Caenorhabditis_elegans
ENSSHAG00000016107	-	97	90.646	ENSCJAG00000001431	SFPQ	61	90.869	Callithrix_jacchus
ENSSHAG00000016107	-	97	86.192	ENSCAFG00000018271	-	65	86.192	Canis_familiaris
ENSSHAG00000016107	-	97	82.851	ENSCAFG00000017608	-	63	84.633	Canis_familiaris
ENSSHAG00000016107	-	97	90.200	ENSCAFG00000003595	-	65	90.869	Canis_familiaris
ENSSHAG00000016107	-	97	86.192	ENSCAFG00020004881	-	65	86.192	Canis_lupus_dingo
ENSSHAG00000016107	-	79	82.337	ENSCAFG00020010702	-	100	82.065	Canis_lupus_dingo
ENSSHAG00000016107	-	97	90.646	ENSCHIG00000023097	SFPQ	58	95.607	Capra_hircus
ENSSHAG00000016107	-	79	88.889	ENSTSYG00000037120	-	100	89.702	Carlito_syrichta
ENSSHAG00000016107	-	79	76.230	ENSTSYG00000035106	-	98	76.503	Carlito_syrichta
ENSSHAG00000016107	-	79	80.759	ENSCPOG00000015018	-	100	80.052	Cavia_porcellus
ENSSHAG00000016107	-	97	90.646	ENSCCAG00000029361	-	61	90.869	Cebus_capucinus
ENSSHAG00000016107	-	97	62.281	ENSCATG00000032664	-	60	63.297	Cercocebus_atys
ENSSHAG00000016107	-	79	93.243	ENSCATG00000036179	-	54	93.243	Cercocebus_atys
ENSSHAG00000016107	-	79	88.889	ENSCLAG00000009583	-	100	89.702	Chinchilla_lanigera
ENSSHAG00000016107	-	97	90.200	ENSCSAG00000001082	SFPQ	61	90.869	Chlorocebus_sabaeus
ENSSHAG00000016107	-	86	85.176	ENSCHOG00000009131	SFPQ	100	86.935	Choloepus_hoffmanni
ENSSHAG00000016107	-	97	89.404	ENSCPBG00000018674	SFPQ	67	89.183	Chrysemys_picta_bellii
ENSSHAG00000016107	-	79	88.889	ENSCANG00000028087	-	100	89.702	Colobus_angolensis_palliatus
ENSSHAG00000016107	-	97	90.200	ENSCGRG00001011698	Sfpq	61	90.869	Cricetulus_griseus_chok1gshd
ENSSHAG00000016107	-	96	90.157	ENSCGRG00000010128	Sfpq	96	90.889	Cricetulus_griseus_crigri
ENSSHAG00000016107	-	98	68.640	ENSCSEG00000007852	sfpq	65	72.906	Cynoglossus_semilaevis
ENSSHAG00000016107	-	95	67.568	ENSCVAG00000019538	sfpq	64	63.920	Cyprinodon_variegatus
ENSSHAG00000016107	-	97	68.514	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSSHAG00000016107	-	97	90.200	ENSDNOG00000049454	SFPQ	61	90.869	Dasypus_novemcinctus
ENSSHAG00000016107	-	97	90.200	ENSDORG00000008109	Sfpq	61	90.869	Dipodomys_ordii
ENSSHAG00000016107	-	97	83.964	ENSETEG00000001095	SFPQ	61	84.187	Echinops_telfairi
ENSSHAG00000016107	-	97	90.200	ENSEASG00005012012	SFPQ	58	95.607	Equus_asinus_asinus
ENSSHAG00000016107	-	97	90.200	ENSECAG00000000642	SFPQ	58	95.607	Equus_caballus
ENSSHAG00000016107	-	97	68.597	ENSELUG00000023145	sfpq	66	69.710	Esox_lucius
ENSSHAG00000016107	-	97	90.200	ENSFCAG00000042862	SFPQ	61	90.869	Felis_catus
ENSSHAG00000016107	-	79	87.534	ENSFALG00000000731	SFPQ	100	87.805	Ficedula_albicollis
ENSSHAG00000016107	-	79	79.675	ENSFDAG00000017723	-	100	81.671	Fukomys_damarensis
ENSSHAG00000016107	-	96	64.430	ENSFHEG00000015200	sfpq	53	71.354	Fundulus_heteroclitus
ENSSHAG00000016107	-	96	70.824	ENSGMOG00000011950	SFPQ	74	71.269	Gadus_morhua
ENSSHAG00000016107	-	97	68.736	ENSGMOG00000011957	sfpq	66	69.845	Gadus_morhua
ENSSHAG00000016107	-	97	90.200	ENSGALG00000002514	SFPQ	67	89.978	Gallus_gallus
ENSSHAG00000016107	-	83	70.466	ENSGAFG00000014571	sfpq	64	70.052	Gambusia_affinis
ENSSHAG00000016107	-	99	69.651	ENSGACG00000002034	sfpq	70	70.087	Gasterosteus_aculeatus
ENSSHAG00000016107	-	97	89.823	ENSGGOG00000026354	SFPQ	100	89.702	Gorilla_gorilla
ENSSHAG00000016107	-	96	69.420	ENSHBUG00000016818	sfpq	58	75.584	Haplochromis_burtoni
ENSSHAG00000016107	-	97	89.602	ENSHGLG00000012001	SFPQ	62	90.265	Heterocephalus_glaber_female
ENSSHAG00000016107	-	79	88.889	ENSHGLG00100004136	-	100	89.702	Heterocephalus_glaber_male
ENSSHAG00000016107	-	96	69.866	ENSHCOG00000008612	sfpq	61	77.581	Hippocampus_comes
ENSSHAG00000016107	-	96	68.750	ENSIPUG00000013076	SFPQ	68	75.844	Ictalurus_punctatus
ENSSHAG00000016107	-	79	88.889	ENSSTOG00000014004	-	100	89.702	Ictidomys_tridecemlineatus
ENSSHAG00000016107	-	97	90.200	ENSJJAG00000015633	Sfpq	61	90.869	Jaculus_jaculus
ENSSHAG00000016107	-	97	66.592	ENSKMAG00000000238	sfpq	50	73.316	Kryptolebias_marmoratus
ENSSHAG00000016107	-	93	71.065	ENSLBEG00000003163	sfpq	53	77.202	Labrus_bergylta
ENSSHAG00000016107	-	98	71.024	ENSLACG00000014728	SFPQ	69	80.808	Latimeria_chalumnae
ENSSHAG00000016107	-	96	72.321	ENSLOCG00000001067	sfpq	68	81.395	Lepisosteus_oculatus
ENSSHAG00000016107	-	97	90.869	ENSLAFG00000015951	SFPQ	68	91.091	Loxodonta_africana
ENSSHAG00000016107	-	97	90.200	ENSMFAG00000000797	SFPQ	61	90.869	Macaca_fascicularis
ENSSHAG00000016107	-	97	90.200	ENSMMUG00000019154	SFPQ	61	90.869	Macaca_mulatta
ENSSHAG00000016107	-	97	90.200	ENSMNEG00000038895	SFPQ	61	90.869	Macaca_nemestrina
ENSSHAG00000016107	-	79	85.908	ENSMLEG00000010643	-	100	86.721	Mandrillus_leucophaeus
ENSSHAG00000016107	-	74	81.686	ENSMLEG00000035352	-	99	82.558	Mandrillus_leucophaeus
ENSSHAG00000016107	-	97	72.284	ENSMAMG00000007875	sfpq	63	78.608	Mastacembelus_armatus
ENSSHAG00000016107	-	96	69.420	ENSMZEG00005026091	sfpq	59	75.584	Maylandia_zebra
ENSSHAG00000016107	-	86	89.196	ENSMGAG00000004237	SFPQ	100	89.196	Meleagris_gallopavo
ENSSHAG00000016107	-	97	89.978	ENSMAUG00000006402	Sfpq	61	90.646	Mesocricetus_auratus
ENSSHAG00000016107	-	97	90.200	ENSMICG00000027265	SFPQ	61	90.869	Microcebus_murinus
ENSSHAG00000016107	-	97	86.414	ENSMOCG00000019075	Sfpq	89	87.082	Microtus_ochrogaster
ENSSHAG00000016107	-	98	69.546	ENSMMOG00000001074	sfpq	68	70.410	Mola_mola
ENSSHAG00000016107	-	97	94.196	ENSMODG00000017937	SFPQ	68	90.084	Monodelphis_domestica
ENSSHAG00000016107	-	96	70.179	ENSMALG00000010381	sfpq	65	76.166	Monopterus_albus
ENSSHAG00000016107	-	97	90.200	MGP_CAROLIEiJ_G0026487	Sfpq	62	90.869	Mus_caroli
ENSSHAG00000016107	-	97	90.200	ENSMUSG00000028820	Sfpq	62	90.869	Mus_musculus
ENSSHAG00000016107	-	97	90.200	MGP_PahariEiJ_G0028818	Sfpq	62	90.869	Mus_pahari
ENSSHAG00000016107	-	97	90.200	MGP_SPRETEiJ_G0027466	Sfpq	62	90.869	Mus_spretus
ENSSHAG00000016107	-	66	94.156	ENSMPUG00000014931	-	99	94.805	Mustela_putorius_furo
ENSSHAG00000016107	-	97	89.978	ENSMLUG00000027090	SFPQ	96	90.646	Myotis_lucifugus
ENSSHAG00000016107	-	97	90.423	ENSNGAG00000000888	Sfpq	61	90.646	Nannospalax_galili
ENSSHAG00000016107	-	96	69.866	ENSNBRG00000017479	sfpq	59	76.104	Neolamprologus_brichardi
ENSSHAG00000016107	-	79	88.889	ENSNLEG00000035521	-	100	89.702	Nomascus_leucogenys
ENSSHAG00000016107	-	97	94.631	ENSMEUG00000014082	SFPQ	61	94.631	Notamacropus_eugenii
ENSSHAG00000016107	-	97	90.200	ENSOPRG00000013696	SFPQ	61	90.869	Ochotona_princeps
ENSSHAG00000016107	-	94	78.111	ENSODEG00000005485	SFPQ	76	78.341	Octodon_degus
ENSSHAG00000016107	-	96	70.312	ENSONIG00000017737	sfpq	59	76.623	Oreochromis_niloticus
ENSSHAG00000016107	-	79	89.130	ENSOANG00000008789	-	100	89.946	Ornithorhynchus_anatinus
ENSSHAG00000016107	-	97	90.200	ENSOCUG00000001877	SFPQ	85	90.869	Oryctolagus_cuniculus
ENSSHAG00000016107	-	96	69.643	ENSORLG00000007459	sfpq	55	74.419	Oryzias_latipes
ENSSHAG00000016107	-	96	69.420	ENSORLG00020011818	sfpq	57	69.643	Oryzias_latipes_hni
ENSSHAG00000016107	-	97	69.265	ENSORLG00015002131	sfpq	54	74.419	Oryzias_latipes_hsok
ENSSHAG00000016107	-	96	68.527	ENSOMEG00000018020	sfpq	54	73.766	Oryzias_melastigma
ENSSHAG00000016107	-	97	90.869	ENSOGAG00000027710	SFPQ	81	91.091	Otolemur_garnettii
ENSSHAG00000016107	-	97	90.646	ENSOARG00000019439	SFPQ	66	90.869	Ovis_aries
ENSSHAG00000016107	-	97	90.646	ENSPPAG00000030078	SFPQ	61	90.869	Pan_paniscus
ENSSHAG00000016107	-	79	88.649	ENSPPRG00000015478	-	100	89.459	Panthera_pardus
ENSSHAG00000016107	-	79	88.889	ENSPTIG00000007710	-	100	89.702	Panthera_tigris_altaica
ENSSHAG00000016107	-	97	83.519	ENSPTRG00000000518	SFPQ	56	87.855	Pan_troglodytes
ENSSHAG00000016107	-	97	90.200	ENSPANG00000005380	SFPQ	64	90.869	Papio_anubis
ENSSHAG00000016107	-	82	77.403	ENSPKIG00000023035	sfpq	76	72.766	Paramormyrops_kingsleyae
ENSSHAG00000016107	-	97	90.646	ENSPSIG00000011494	SFPQ	100	90.200	Pelodiscus_sinensis
ENSSHAG00000016107	-	99	61.874	ENSPMGG00000023883	sfpq	63	75.645	Periophthalmus_magnuspinnatus
ENSSHAG00000016107	-	97	90.200	ENSPEMG00000009794	Sfpq	89	90.869	Peromyscus_maniculatus_bairdii
ENSSHAG00000016107	-	68	72.871	ENSPMAG00000005583	sfpq	67	72.871	Petromyzon_marinus
ENSSHAG00000016107	-	97	94.855	ENSPCIG00000000923	SFPQ	63	94.458	Phascolarctos_cinereus
ENSSHAG00000016107	-	97	64.588	ENSPFOG00000003127	sfpq	71	65.702	Poecilia_formosa
ENSSHAG00000016107	-	96	64.206	ENSPREG00000008060	sfpq	56	71.615	Poecilia_reticulata
ENSSHAG00000016107	-	97	90.200	ENSPPYG00000001560	SFPQ	61	90.869	Pongo_abelii
ENSSHAG00000016107	-	95	89.038	ENSPCAG00000006164	SFPQ	60	89.709	Procavia_capensis
ENSSHAG00000016107	-	97	90.200	ENSPCOG00000027127	SFPQ	61	90.869	Propithecus_coquereli
ENSSHAG00000016107	-	97	88.196	ENSPVAG00000001865	SFPQ	61	88.419	Pteropus_vampyrus
ENSSHAG00000016107	-	96	69.420	ENSPNYG00000007494	sfpq	61	70.312	Pundamilia_nyererei
ENSSHAG00000016107	-	97	67.770	ENSPNAG00000002128	sfpq	71	70.667	Pygocentrus_nattereri
ENSSHAG00000016107	-	97	90.200	ENSRNOG00000058461	Sfpq	62	90.869	Rattus_norvegicus
ENSSHAG00000016107	-	94	83.827	ENSRBIG00000035286	SFPQ	100	89.702	Rhinopithecus_bieti
ENSSHAG00000016107	-	97	90.200	ENSRROG00000040992	SFPQ	100	89.702	Rhinopithecus_roxellana
ENSSHAG00000016107	-	76	66.573	ENSSBOG00000033925	-	97	65.730	Saimiri_boliviensis_boliviensis
ENSSHAG00000016107	-	79	88.889	ENSSBOG00000024972	-	100	89.702	Saimiri_boliviensis_boliviensis
ENSSHAG00000016107	-	96	71.141	ENSSFOG00015009289	sfpq	77	74.720	Scleropages_formosus
ENSSHAG00000016107	-	97	72.768	ENSSMAG00000018201	sfpq	65	72.768	Scophthalmus_maximus
ENSSHAG00000016107	-	99	70.806	ENSSDUG00000008402	sfpq	66	73.696	Seriola_dumerili
ENSSHAG00000016107	-	99	70.806	ENSSLDG00000018917	sfpq	63	78.841	Seriola_lalandi_dorsalis
ENSSHAG00000016107	-	83	89.378	ENSSARG00000006409	SFPQ	100	90.155	Sorex_araneus
ENSSHAG00000016107	-	97	71.047	ENSSPAG00000016550	sfpq	59	77.403	Stegastes_partitus
ENSSHAG00000016107	-	97	90.646	ENSSSCG00000035690	SFPQ	58	95.607	Sus_scrofa
ENSSHAG00000016107	-	97	89.755	ENSTGUG00000001722	SFPQ	100	89.978	Taeniopygia_guttata
ENSSHAG00000016107	-	96	72.036	ENSTRUG00000003783	sfpq	59	78.646	Takifugu_rubripes
ENSSHAG00000016107	-	96	73.214	ENSTNIG00000011331	sfpq	71	73.214	Tetraodon_nigroviridis
ENSSHAG00000016107	-	97	88.419	ENSTTRG00000013930	SFPQ	61	88.196	Tursiops_truncatus
ENSSHAG00000016107	-	65	97.990	ENSUAMG00000026758	SFPQ	73	97.990	Ursus_americanus
ENSSHAG00000016107	-	79	86.450	ENSUMAG00000008056	-	100	87.263	Ursus_maritimus
ENSSHAG00000016107	-	83	85.233	ENSVPAG00000006960	-	58	85.233	Vicugna_pacos
ENSSHAG00000016107	-	79	79.133	ENSVVUG00000000874	-	100	77.778	Vulpes_vulpes
ENSSHAG00000016107	-	97	79.029	ENSXETG00000009682	sfpq	100	86.293	Xenopus_tropicalis
ENSSHAG00000016107	-	83	70.207	ENSXMAG00000016391	sfpq	56	72.021	Xiphophorus_maculatus