EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000016140 (Gene tree)
Gene ID: 100932277
Gene Symbol: GPATCH8
Alias: GPATC8|KIAA0553
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 110361 bases
Position: chrGL856829.1:2044779-2155139
Accession: 100932277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000019016	zf-C2H2_jaz	PF12171.8	2.1e-06	1	1
ENSSHAP00000019016	G-patch	PF01585.23	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000019172	GPATCH8-201	5394	-	ENSSHAP00000019016	1496 (aa)	XP_012403873	G3WUB1

Gene Model

Click here to download ENSSHAG00000016140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016140's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016140	GPATCH8	100	79.855	ENSG00000186566	GPATCH8	93	100.000	Homo_sapiens
ENSSHAG00000016140	GPATCH8	99	79.536	ENSAMEG00000018376	GPATCH8	99	82.119	Ailuropoda_melanoleuca
ENSSHAG00000016140	GPATCH8	54	64.596	ENSAPLG00000003095	GPATCH8	99	68.829	Anas_platyrhynchos
ENSSHAG00000016140	GPATCH8	100	81.866	ENSANAG00000032773	GPATCH8	100	82.660	Aotus_nancymaae
ENSSHAG00000016140	GPATCH8	100	79.079	ENSBTAG00000038316	GPATCH8	100	81.184	Bos_taurus
ENSSHAG00000016140	GPATCH8	100	81.205	ENSCJAG00000009807	GPATCH8	100	81.932	Callithrix_jacchus
ENSSHAG00000016140	GPATCH8	100	79.563	ENSCAFG00000014136	GPATCH8	100	82.474	Canis_familiaris
ENSSHAG00000016140	GPATCH8	99	79.386	ENSCAFG00020009830	GPATCH8	99	82.322	Canis_lupus_dingo
ENSSHAG00000016140	GPATCH8	99	79.947	ENSCHIG00000008962	GPATCH8	99	80.905	Capra_hircus
ENSSHAG00000016140	GPATCH8	100	75.942	ENSTSYG00000033153	GPATCH8	100	76.304	Carlito_syrichta
ENSSHAG00000016140	GPATCH8	99	72.159	ENSCAPG00000004450	GPATCH8	99	71.894	Cavia_aperea
ENSSHAG00000016140	GPATCH8	99	72.630	ENSCPOG00000039068	GPATCH8	100	72.363	Cavia_porcellus
ENSSHAG00000016140	GPATCH8	100	79.894	ENSCCAG00000030686	GPATCH8	100	82.275	Cebus_capucinus
ENSSHAG00000016140	GPATCH8	100	82.065	ENSCATG00000028156	GPATCH8	100	82.925	Cercocebus_atys
ENSSHAG00000016140	GPATCH8	100	81.956	ENSCSAG00000003586	GPATCH8	100	82.816	Chlorocebus_sabaeus
ENSSHAG00000016140	GPATCH8	100	69.856	ENSCPBG00000008955	GPATCH8	100	70.125	Chrysemys_picta_bellii
ENSSHAG00000016140	GPATCH8	100	79.789	ENSCANG00000039731	GPATCH8	100	82.299	Colobus_angolensis_palliatus
ENSSHAG00000016140	GPATCH8	100	78.680	ENSCGRG00001020210	Gpatch8	100	79.010	Cricetulus_griseus_chok1gshd
ENSSHAG00000016140	GPATCH8	100	78.680	ENSCGRG00000017090	Gpatch8	100	79.010	Cricetulus_griseus_crigri
ENSSHAG00000016140	GPATCH8	100	80.185	ENSDNOG00000005102	GPATCH8	100	80.581	Dasypus_novemcinctus
ENSSHAG00000016140	GPATCH8	100	79.301	ENSDORG00000027664	Gpatch8	100	79.960	Dipodomys_ordii
ENSSHAG00000016140	GPATCH8	100	76.841	ENSETEG00000001325	GPATCH8	100	77.439	Echinops_telfairi
ENSSHAG00000016140	GPATCH8	67	46.549	ENSEBUG00000005749	gpatch8	70	47.200	Eptatretus_burgeri
ENSSHAG00000016140	GPATCH8	100	81.499	ENSEASG00005010264	GPATCH8	92	82.560	Equus_asinus_asinus
ENSSHAG00000016140	GPATCH8	100	81.499	ENSECAG00000040232	GPATCH8	99	82.560	Equus_caballus
ENSSHAG00000016140	GPATCH8	94	100.000	ENSEEUG00000008586	GPATCH8	94	100.000	Erinaceus_europaeus
ENSSHAG00000016140	GPATCH8	99	66.379	ENSFALG00000009554	GPATCH8	100	67.066	Ficedula_albicollis
ENSSHAG00000016140	GPATCH8	100	63.974	ENSGALG00000041556	GPATCH8	100	62.987	Gallus_gallus
ENSSHAG00000016140	GPATCH8	100	69.165	ENSGAGG00000008358	GPATCH8	100	69.216	Gopherus_agassizii
ENSSHAG00000016140	GPATCH8	100	79.657	ENSGGOG00000013860	GPATCH8	100	80.317	Gorilla_gorilla
ENSSHAG00000016140	GPATCH8	100	71.202	ENSHGLG00000017687	GPATCH8	100	71.532	Heterocephalus_glaber_female
ENSSHAG00000016140	GPATCH8	76	73.641	ENSHGLG00100010738	GPATCH8	98	73.641	Heterocephalus_glaber_male
ENSSHAG00000016140	GPATCH8	52	63.136	ENSIPUG00000015431	gpatch8	55	60.606	Ictalurus_punctatus
ENSSHAG00000016140	GPATCH8	100	80.488	ENSSTOG00000025022	GPATCH8	100	80.949	Ictidomys_tridecemlineatus
ENSSHAG00000016140	GPATCH8	100	79.671	ENSJJAG00000017797	Gpatch8	100	79.276	Jaculus_jaculus
ENSSHAG00000016140	GPATCH8	51	57.417	ENSLACG00000017530	GPATCH8	100	58.447	Latimeria_chalumnae
ENSSHAG00000016140	GPATCH8	85	78.326	ENSLAFG00000032250	GPATCH8	100	78.795	Loxodonta_africana
ENSSHAG00000016140	GPATCH8	100	81.890	ENSMFAG00000039126	GPATCH8	100	82.750	Macaca_fascicularis
ENSSHAG00000016140	GPATCH8	100	81.890	ENSMMUG00000012658	GPATCH8	100	82.750	Macaca_mulatta
ENSSHAG00000016140	GPATCH8	100	81.824	ENSMNEG00000031426	GPATCH8	100	82.683	Macaca_nemestrina
ENSSHAG00000016140	GPATCH8	100	81.890	ENSMLEG00000038860	GPATCH8	100	82.750	Mandrillus_leucophaeus
ENSSHAG00000016140	GPATCH8	100	79.010	ENSMAUG00000021770	Gpatch8	100	79.670	Mesocricetus_auratus
ENSSHAG00000016140	GPATCH8	100	80.106	ENSMICG00000028586	GPATCH8	100	82.353	Microcebus_murinus
ENSSHAG00000016140	GPATCH8	55	75.747	ENSMOCG00000001658	Gpatch8	100	79.276	Microtus_ochrogaster
ENSSHAG00000016140	GPATCH8	100	92.924	ENSMODG00000011442	GPATCH8	100	92.924	Monodelphis_domestica
ENSSHAG00000016140	GPATCH8	100	76.877	ENSMUSG00000034621	Gpatch8	100	79.315	Mus_musculus
ENSSHAG00000016140	GPATCH8	100	79.630	ENSMPUG00000009274	GPATCH8	100	82.209	Mustela_putorius_furo
ENSSHAG00000016140	GPATCH8	93	95.270	ENSMLUG00000013840	GPATCH8	99	95.918	Myotis_lucifugus
ENSSHAG00000016140	GPATCH8	77	91.466	ENSMEUG00000011799	GPATCH8	100	91.466	Notamacropus_eugenii
ENSSHAG00000016140	GPATCH8	100	74.074	ENSOPRG00000008816	GPATCH8	100	74.620	Ochotona_princeps
ENSSHAG00000016140	GPATCH8	100	79.894	ENSOCUG00000003291	GPATCH8	100	81.151	Oryctolagus_cuniculus
ENSSHAG00000016140	GPATCH8	97	80.557	ENSOGAG00000033643	GPATCH8	100	81.985	Otolemur_garnettii
ENSSHAG00000016140	GPATCH8	100	74.934	ENSOARG00000008370	GPATCH8	100	76.979	Ovis_aries
ENSSHAG00000016140	GPATCH8	100	80.185	ENSPPAG00000040523	GPATCH8	100	82.299	Pan_paniscus
ENSSHAG00000016140	GPATCH8	100	79.524	ENSPPRG00000023310	GPATCH8	100	82.431	Panthera_pardus
ENSSHAG00000016140	GPATCH8	100	78.468	ENSPTIG00000020001	GPATCH8	100	82.034	Panthera_tigris_altaica
ENSSHAG00000016140	GPATCH8	100	79.987	ENSPTRG00000009278	GPATCH8	100	82.365	Pan_troglodytes
ENSSHAG00000016140	GPATCH8	100	81.824	ENSPANG00000021304	GPATCH8	100	82.683	Papio_anubis
ENSSHAG00000016140	GPATCH8	100	78.694	ENSPEMG00000008337	Gpatch8	100	79.222	Peromyscus_maniculatus_bairdii
ENSSHAG00000016140	GPATCH8	95	94.577	ENSPCIG00000019927	GPATCH8	100	94.577	Phascolarctos_cinereus
ENSSHAG00000016140	GPATCH8	100	81.163	ENSPPYG00000008329	GPATCH8	100	81.626	Pongo_abelii
ENSSHAG00000016140	GPATCH8	77	100.000	ENSPCAG00000004441	GPATCH8	77	100.000	Procavia_capensis
ENSSHAG00000016140	GPATCH8	100	78.425	ENSPCOG00000019209	GPATCH8	100	80.410	Propithecus_coquereli
ENSSHAG00000016140	GPATCH8	100	79.524	ENSPVAG00000003155	GPATCH8	100	81.602	Pteropus_vampyrus
ENSSHAG00000016140	GPATCH8	100	79.855	ENSRBIG00000033713	GPATCH8	100	82.365	Rhinopithecus_bieti
ENSSHAG00000016140	GPATCH8	100	79.855	ENSRROG00000029623	GPATCH8	100	82.365	Rhinopithecus_roxellana
ENSSHAG00000016140	GPATCH8	100	79.960	ENSSBOG00000023544	GPATCH8	100	82.341	Saimiri_boliviensis_boliviensis
ENSSHAG00000016140	GPATCH8	100	77.498	ENSSARG00000007516	GPATCH8	100	79.484	Sorex_araneus
ENSSHAG00000016140	GPATCH8	51	58.052	ENSSPUG00000011251	GPATCH8	100	64.583	Sphenodon_punctatus
ENSSHAG00000016140	GPATCH8	100	79.617	ENSSSCG00000017357	ITGA2B	100	81.015	Sus_scrofa
ENSSHAG00000016140	GPATCH8	91	86.025	ENSTBEG00000009486	GPATCH8	91	86.025	Tupaia_belangeri
ENSSHAG00000016140	GPATCH8	95	76.848	ENSUMAG00000013891	GPATCH8	100	79.358	Ursus_maritimus
ENSSHAG00000016140	GPATCH8	90	78.280	ENSVPAG00000006937	GPATCH8	99	79.300	Vicugna_pacos
ENSSHAG00000016140	GPATCH8	100	79.351	ENSVVUG00000017996	GPATCH8	100	82.197	Vulpes_vulpes