EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000016190 (Gene tree)
Gene ID: 100928625
Gene Symbol: RNASEH2B
Alias: AGS2|DLEU8|FLJ11712
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 67868 bases
Position: chrGL849711.1:2060043-2127910
Accession: 100928625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000019071	RNase_H2-Ydr279	PF09468.10	7.6e-18	1	1
ENSSHAP00000019072	RNase_H2-Ydr279	PF09468.10	7.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000019228	RNASEH2B-202	1940	-	ENSSHAP00000019072	307 (aa)	XP_012400717	G3WUG7
ENSSHAT00000019227	RNASEH2B-201	1774	-	ENSSHAP00000019071	310 (aa)	-	G3WUG6

Gene Model

Click here to download ENSSHAG00000016190's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016190	RNASEH2B	96	67.347	ENSG00000136104	RNASEH2B	88	80.247	Homo_sapiens
ENSSHAG00000016190	RNASEH2B	100	56.818	ENSAPOG00000010496	rnaseh2b	100	56.452	Acanthochromis_polyacanthus
ENSSHAG00000016190	RNASEH2B	93	63.574	ENSAMEG00000012040	RNASEH2B	98	63.574	Ailuropoda_melanoleuca
ENSSHAG00000016190	RNASEH2B	100	48.544	ENSACIG00000021991	rnaseh2b	97	52.239	Amphilophus_citrinellus
ENSSHAG00000016190	RNASEH2B	100	56.169	ENSAOCG00000013398	rnaseh2b	100	55.484	Amphiprion_ocellaris
ENSSHAG00000016190	RNASEH2B	100	56.169	ENSAPEG00000006033	rnaseh2b	100	55.484	Amphiprion_percula
ENSSHAG00000016190	RNASEH2B	100	55.844	ENSATEG00000008370	rnaseh2b	100	55.806	Anabas_testudineus
ENSSHAG00000016190	RNASEH2B	89	72.426	ENSAPLG00000008955	RNASEH2B	100	72.426	Anas_platyrhynchos
ENSSHAG00000016190	RNASEH2B	94	68.276	ENSACAG00000011679	RNASEH2B	98	68.276	Anolis_carolinensis
ENSSHAG00000016190	RNASEH2B	96	67.687	ENSANAG00000020662	RNASEH2B	95	67.687	Aotus_nancymaae
ENSSHAG00000016190	RNASEH2B	100	53.896	ENSACLG00000000467	rnaseh2b	100	53.226	Astatotilapia_calliptera
ENSSHAG00000016190	RNASEH2B	100	55.700	ENSAMXG00000014351	rnaseh2b	99	55.700	Astyanax_mexicanus
ENSSHAG00000016190	RNASEH2B	94	63.103	ENSBTAG00000020149	RNASEH2B	94	63.103	Bos_taurus
ENSSHAG00000016190	RNASEH2B	94	67.361	ENSCJAG00000008585	-	95	67.361	Callithrix_jacchus
ENSSHAG00000016190	RNASEH2B	78	60.669	ENSCJAG00000003822	-	88	60.669	Callithrix_jacchus
ENSSHAG00000016190	RNASEH2B	92	65.018	ENSCAFG00000004295	RNASEH2B	92	64.311	Canis_familiaris
ENSSHAG00000016190	RNASEH2B	94	64.931	ENSCAFG00020000250	RNASEH2B	94	64.931	Canis_lupus_dingo
ENSSHAG00000016190	RNASEH2B	76	59.483	ENSCHIG00000012982	-	82	59.483	Capra_hircus
ENSSHAG00000016190	RNASEH2B	94	62.500	ENSCHIG00000018220	RNASEH2B	94	62.500	Capra_hircus
ENSSHAG00000016190	RNASEH2B	92	66.431	ENSTSYG00000009176	-	92	66.431	Carlito_syrichta
ENSSHAG00000016190	RNASEH2B	94	57.785	ENSTSYG00000031177	-	95	57.785	Carlito_syrichta
ENSSHAG00000016190	RNASEH2B	91	57.348	ENSCAPG00000009978	RNASEH2B	95	57.394	Cavia_aperea
ENSSHAG00000016190	RNASEH2B	94	61.168	ENSCPOG00000032527	RNASEH2B	94	61.168	Cavia_porcellus
ENSSHAG00000016190	RNASEH2B	96	66.667	ENSCCAG00000026979	RNASEH2B	96	66.781	Cebus_capucinus
ENSSHAG00000016190	RNASEH2B	93	66.551	ENSCATG00000031336	RNASEH2B	81	66.551	Cercocebus_atys
ENSSHAG00000016190	RNASEH2B	93	64.931	ENSCLAG00000003517	RNASEH2B	79	64.931	Chinchilla_lanigera
ENSSHAG00000016190	RNASEH2B	94	66.096	ENSCSAG00000017701	RNASEH2B	88	66.096	Chlorocebus_sabaeus
ENSSHAG00000016190	RNASEH2B	95	56.610	ENSCHOG00000013688	RNASEH2B	95	56.610	Choloepus_hoffmanni
ENSSHAG00000016190	RNASEH2B	99	73.115	ENSCPBG00000008684	RNASEH2B	94	73.115	Chrysemys_picta_bellii
ENSSHAG00000016190	RNASEH2B	94	38.284	ENSCING00000016454	-	95	38.284	Ciona_intestinalis
ENSSHAG00000016190	RNASEH2B	96	65.993	ENSCANG00000041511	-	95	65.993	Colobus_angolensis_palliatus
ENSSHAG00000016190	RNASEH2B	95	63.946	ENSCGRG00001000611	Rnaseh2b	95	63.946	Cricetulus_griseus_chok1gshd
ENSSHAG00000016190	RNASEH2B	95	63.946	ENSCGRG00000006077	Rnaseh2b	95	63.946	Cricetulus_griseus_crigri
ENSSHAG00000016190	RNASEH2B	99	54.575	ENSCSEG00000004910	rnaseh2b	100	53.871	Cynoglossus_semilaevis
ENSSHAG00000016190	RNASEH2B	100	56.169	ENSCVAG00000005212	rnaseh2b	100	55.484	Cyprinodon_variegatus
ENSSHAG00000016190	RNASEH2B	100	56.494	ENSDARG00000005128	rnaseh2b	99	56.536	Danio_rerio
ENSSHAG00000016190	RNASEH2B	91	62.007	ENSDNOG00000049666	-	90	62.007	Dasypus_novemcinctus
ENSSHAG00000016190	RNASEH2B	98	56.954	ENSDNOG00000034290	-	98	56.954	Dasypus_novemcinctus
ENSSHAG00000016190	RNASEH2B	97	62.752	ENSDORG00000010708	Rnaseh2b	96	62.752	Dipodomys_ordii
ENSSHAG00000016190	RNASEH2B	90	30.619	FBgn0030507	CG11164	89	30.619	Drosophila_melanogaster
ENSSHAG00000016190	RNASEH2B	84	40.769	ENSEBUG00000005965	rnaseh2b	98	41.923	Eptatretus_burgeri
ENSSHAG00000016190	RNASEH2B	94	66.552	ENSEASG00005017323	RNASEH2B	94	66.552	Equus_asinus_asinus
ENSSHAG00000016190	RNASEH2B	94	66.552	ENSECAG00000014262	RNASEH2B	94	66.552	Equus_caballus
ENSSHAG00000016190	RNASEH2B	100	52.922	ENSELUG00000019560	rnaseh2b	100	52.258	Esox_lucius
ENSSHAG00000016190	RNASEH2B	92	63.251	ENSFCAG00000014257	RNASEH2B	88	63.251	Felis_catus
ENSSHAG00000016190	RNASEH2B	93	68.182	ENSFALG00000008435	RNASEH2B	97	68.182	Ficedula_albicollis
ENSSHAG00000016190	RNASEH2B	92	63.701	ENSFDAG00000009920	RNASEH2B	98	63.701	Fukomys_damarensis
ENSSHAG00000016190	RNASEH2B	100	56.494	ENSFHEG00000012160	rnaseh2b	100	55.806	Fundulus_heteroclitus
ENSSHAG00000016190	RNASEH2B	85	57.143	ENSGMOG00000016830	rnaseh2b	93	56.827	Gadus_morhua
ENSSHAG00000016190	RNASEH2B	100	66.883	ENSGALG00000017015	RNASEH2B	100	66.883	Gallus_gallus
ENSSHAG00000016190	RNASEH2B	100	54.545	ENSGAFG00000021222	rnaseh2b	100	53.871	Gambusia_affinis
ENSSHAG00000016190	RNASEH2B	100	54.633	ENSGACG00000002821	rnaseh2b	100	53.968	Gasterosteus_aculeatus
ENSSHAG00000016190	RNASEH2B	91	73.022	ENSGAGG00000014722	RNASEH2B	99	73.022	Gopherus_agassizii
ENSSHAG00000016190	RNASEH2B	96	66.667	ENSGGOG00000001044	RNASEH2B	95	66.667	Gorilla_gorilla
ENSSHAG00000016190	RNASEH2B	100	54.221	ENSHBUG00000006049	rnaseh2b	100	53.548	Haplochromis_burtoni
ENSSHAG00000016190	RNASEH2B	92	64.311	ENSHGLG00100015953	RNASEH2B	96	64.311	Heterocephalus_glaber_male
ENSSHAG00000016190	RNASEH2B	100	53.074	ENSHCOG00000003318	rnaseh2b	100	52.412	Hippocampus_comes
ENSSHAG00000016190	RNASEH2B	99	57.049	ENSIPUG00000023815	rnaseh2b	99	57.049	Ictalurus_punctatus
ENSSHAG00000016190	RNASEH2B	91	66.071	ENSSTOG00000015126	RNASEH2B	96	66.071	Ictidomys_tridecemlineatus
ENSSHAG00000016190	RNASEH2B	93	64.808	ENSJJAG00000013335	Rnaseh2b	97	64.808	Jaculus_jaculus
ENSSHAG00000016190	RNASEH2B	100	55.519	ENSKMAG00000002198	rnaseh2b	100	54.839	Kryptolebias_marmoratus
ENSSHAG00000016190	RNASEH2B	99	56.209	ENSLBEG00000019331	rnaseh2b	100	55.484	Labrus_bergylta
ENSSHAG00000016190	RNASEH2B	73	64.317	ENSLACG00000010782	RNASEH2B	92	63.596	Latimeria_chalumnae
ENSSHAG00000016190	RNASEH2B	100	59.416	ENSLOCG00000009296	rnaseh2b	100	59.032	Lepisosteus_oculatus
ENSSHAG00000016190	RNASEH2B	92	63.732	ENSLAFG00000030158	RNASEH2B	92	63.732	Loxodonta_africana
ENSSHAG00000016190	RNASEH2B	96	66.667	ENSMFAG00000038464	-	95	66.667	Macaca_fascicularis
ENSSHAG00000016190	RNASEH2B	96	59.864	ENSMMUG00000021746	RNASEH2B	92	63.830	Macaca_mulatta
ENSSHAG00000016190	RNASEH2B	96	66.667	ENSMNEG00000030580	RNASEH2B	95	66.667	Macaca_nemestrina
ENSSHAG00000016190	RNASEH2B	96	65.993	ENSMLEG00000043911	-	96	65.667	Mandrillus_leucophaeus
ENSSHAG00000016190	RNASEH2B	100	57.468	ENSMAMG00000017109	rnaseh2b	100	56.774	Mastacembelus_armatus
ENSSHAG00000016190	RNASEH2B	100	51.623	ENSMZEG00005021926	rnaseh2b	100	51.438	Maylandia_zebra
ENSSHAG00000016190	RNASEH2B	93	68.293	ENSMGAG00000015025	RNASEH2B	100	68.293	Meleagris_gallopavo
ENSSHAG00000016190	RNASEH2B	95	64.286	ENSMAUG00000016520	Rnaseh2b	95	64.286	Mesocricetus_auratus
ENSSHAG00000016190	RNASEH2B	95	66.102	ENSMICG00000000528	RNASEH2B	95	66.102	Microcebus_murinus
ENSSHAG00000016190	RNASEH2B	100	52.922	ENSMMOG00000019799	rnaseh2b	99	57.491	Mola_mola
ENSSHAG00000016190	RNASEH2B	100	89.251	ENSMODG00000010775	RNASEH2B	100	89.251	Monodelphis_domestica
ENSSHAG00000016190	RNASEH2B	100	54.870	ENSMALG00000004463	rnaseh2b	100	54.870	Monopterus_albus
ENSSHAG00000016190	RNASEH2B	76	66.102	MGP_CAROLIEiJ_G0019389	Rnaseh2b	86	66.102	Mus_caroli
ENSSHAG00000016190	RNASEH2B	97	61.589	ENSMUSG00000021932	Rnaseh2b	97	61.589	Mus_musculus
ENSSHAG00000016190	RNASEH2B	95	50.149	MGP_PahariEiJ_G0030407	-	96	50.149	Mus_pahari
ENSSHAG00000016190	RNASEH2B	73	61.607	ENSMPUG00000018010	RNASEH2B	94	61.607	Mustela_putorius_furo
ENSSHAG00000016190	RNASEH2B	94	66.207	ENSMLUG00000004065	-	94	66.207	Myotis_lucifugus
ENSSHAG00000016190	RNASEH2B	100	53.896	ENSNBRG00000003253	rnaseh2b	100	53.226	Neolamprologus_brichardi
ENSSHAG00000016190	RNASEH2B	96	67.340	ENSNLEG00000003804	RNASEH2B	95	67.340	Nomascus_leucogenys
ENSSHAG00000016190	RNASEH2B	92	90.175	ENSMEUG00000003665	RNASEH2B	98	90.175	Notamacropus_eugenii
ENSSHAG00000016190	RNASEH2B	52	71.698	ENSOPRG00000003695	-	51	71.698	Ochotona_princeps
ENSSHAG00000016190	RNASEH2B	94	65.172	ENSODEG00000006793	-	94	65.172	Octodon_degus
ENSSHAG00000016190	RNASEH2B	71	60.550	ENSODEG00000005412	-	90	60.550	Octodon_degus
ENSSHAG00000016190	RNASEH2B	100	51.923	ENSONIG00000006657	rnaseh2b	100	52.581	Oreochromis_niloticus
ENSSHAG00000016190	RNASEH2B	93	73.793	ENSOANG00000015537	RNASEH2B	100	73.793	Ornithorhynchus_anatinus
ENSSHAG00000016190	RNASEH2B	95	63.140	ENSOCUG00000008904	RNASEH2B	92	63.140	Oryctolagus_cuniculus
ENSSHAG00000016190	RNASEH2B	99	57.049	ENSORLG00000011850	rnaseh2b	100	57.190	Oryzias_latipes
ENSSHAG00000016190	RNASEH2B	99	57.705	ENSORLG00020012081	rnaseh2b	100	57.843	Oryzias_latipes_hni
ENSSHAG00000016190	RNASEH2B	99	57.377	ENSORLG00015015468	rnaseh2b	100	57.516	Oryzias_latipes_hsok
ENSSHAG00000016190	RNASEH2B	99	55.738	ENSOMEG00000012441	rnaseh2b	100	55.738	Oryzias_melastigma
ENSSHAG00000016190	RNASEH2B	93	65.157	ENSOGAG00000016486	RNASEH2B	96	65.157	Otolemur_garnettii
ENSSHAG00000016190	RNASEH2B	92	63.475	ENSOARG00000008701	RNASEH2B	95	63.475	Ovis_aries
ENSSHAG00000016190	RNASEH2B	89	69.565	ENSPPAG00000026374	RNASEH2B	95	66.820	Pan_paniscus
ENSSHAG00000016190	RNASEH2B	94	61.905	ENSPPRG00000012450	RNASEH2B	96	61.905	Panthera_pardus
ENSSHAG00000016190	RNASEH2B	89	63.899	ENSPTIG00000013918	RNASEH2B	99	63.899	Panthera_tigris_altaica
ENSSHAG00000016190	RNASEH2B	96	67.003	ENSPTRG00000005886	RNASEH2B	95	71.600	Pan_troglodytes
ENSSHAG00000016190	RNASEH2B	96	65.993	ENSPANG00000022424	-	96	65.667	Papio_anubis
ENSSHAG00000016190	RNASEH2B	99	53.770	ENSPKIG00000013386	rnaseh2b	100	53.226	Paramormyrops_kingsleyae
ENSSHAG00000016190	RNASEH2B	61	70.213	ENSPSIG00000002224	RNASEH2B	87	70.213	Pelodiscus_sinensis
ENSSHAG00000016190	RNASEH2B	64	58.163	ENSPMGG00000010299	rnaseh2b	95	58.163	Periophthalmus_magnuspinnatus
ENSSHAG00000016190	RNASEH2B	97	62.000	ENSPEMG00000019721	Rnaseh2b	97	62.000	Peromyscus_maniculatus_bairdii
ENSSHAG00000016190	RNASEH2B	95	86.598	ENSPCIG00000014535	-	98	86.598	Phascolarctos_cinereus
ENSSHAG00000016190	RNASEH2B	100	55.806	ENSPFOG00000016722	rnaseh2b	100	55.128	Poecilia_formosa
ENSSHAG00000016190	RNASEH2B	100	55.844	ENSPLAG00000011755	rnaseh2b	100	55.161	Poecilia_latipinna
ENSSHAG00000016190	RNASEH2B	100	56.169	ENSPMEG00000002721	rnaseh2b	100	55.484	Poecilia_mexicana
ENSSHAG00000016190	RNASEH2B	100	55.844	ENSPREG00000007737	rnaseh2b	100	55.161	Poecilia_reticulata
ENSSHAG00000016190	RNASEH2B	96	66.667	ENSPPYG00000005378	RNASEH2B	95	66.667	Pongo_abelii
ENSSHAG00000016190	RNASEH2B	96	65.763	ENSPCOG00000026623	RNASEH2B	96	65.000	Propithecus_coquereli
ENSSHAG00000016190	RNASEH2B	82	62.992	ENSPVAG00000000508	RNASEH2B	95	62.992	Pteropus_vampyrus
ENSSHAG00000016190	RNASEH2B	100	54.221	ENSPNYG00000013552	rnaseh2b	100	53.548	Pundamilia_nyererei
ENSSHAG00000016190	RNASEH2B	100	54.221	ENSPNAG00000024825	rnaseh2b	99	54.221	Pygocentrus_nattereri
ENSSHAG00000016190	RNASEH2B	97	61.130	ENSRNOG00000009192	Rnaseh2b	97	61.130	Rattus_norvegicus
ENSSHAG00000016190	RNASEH2B	96	66.102	ENSRBIG00000028928	-	95	66.102	Rhinopithecus_bieti
ENSSHAG00000016190	RNASEH2B	97	57.860	ENSRBIG00000036017	-	98	57.860	Rhinopithecus_bieti
ENSSHAG00000016190	RNASEH2B	72	55.656	ENSRROG00000044915	-	84	55.656	Rhinopithecus_roxellana
ENSSHAG00000016190	RNASEH2B	96	66.102	ENSRROG00000018808	-	95	66.102	Rhinopithecus_roxellana
ENSSHAG00000016190	RNASEH2B	96	66.327	ENSSBOG00000008081	RNASEH2B	97	69.231	Saimiri_boliviensis_boliviensis
ENSSHAG00000016190	RNASEH2B	99	57.792	ENSSFOG00015010190	rnaseh2b	100	57.792	Scleropages_formosus
ENSSHAG00000016190	RNASEH2B	100	55.519	ENSSMAG00000001546	rnaseh2b	100	54.839	Scophthalmus_maximus
ENSSHAG00000016190	RNASEH2B	100	57.468	ENSSDUG00000007567	rnaseh2b	100	56.774	Seriola_dumerili
ENSSHAG00000016190	RNASEH2B	100	56.818	ENSSLDG00000012485	rnaseh2b	100	56.129	Seriola_lalandi_dorsalis
ENSSHAG00000016190	RNASEH2B	86	67.170	ENSSPUG00000006745	-	95	67.170	Sphenodon_punctatus
ENSSHAG00000016190	RNASEH2B	100	57.468	ENSSPAG00000020926	rnaseh2b	100	56.774	Stegastes_partitus
ENSSHAG00000016190	RNASEH2B	90	65.468	ENSSSCG00000024385	RNASEH2B	98	67.331	Sus_scrofa
ENSSHAG00000016190	RNASEH2B	89	69.118	ENSTGUG00000012104	RNASEH2B	100	69.118	Taeniopygia_guttata
ENSSHAG00000016190	RNASEH2B	100	54.870	ENSTRUG00000015098	rnaseh2b	100	54.194	Takifugu_rubripes
ENSSHAG00000016190	RNASEH2B	100	54.693	ENSTNIG00000013861	rnaseh2b	100	54.341	Tetraodon_nigroviridis
ENSSHAG00000016190	RNASEH2B	90	60.000	ENSTTRG00000010761	RNASEH2B	91	59.574	Tursiops_truncatus
ENSSHAG00000016190	RNASEH2B	93	64.583	ENSUAMG00000022849	RNASEH2B	99	65.827	Ursus_americanus
ENSSHAG00000016190	RNASEH2B	93	63.889	ENSUMAG00000018556	RNASEH2B	99	65.108	Ursus_maritimus
ENSSHAG00000016190	RNASEH2B	90	66.187	ENSVPAG00000005679	RNASEH2B	97	65.714	Vicugna_pacos
ENSSHAG00000016190	RNASEH2B	92	64.664	ENSVVUG00000024015	RNASEH2B	84	64.664	Vulpes_vulpes
ENSSHAG00000016190	RNASEH2B	100	64.610	ENSXETG00000020720	rnaseh2b	100	64.610	Xenopus_tropicalis
ENSSHAG00000016190	RNASEH2B	100	54.221	ENSXCOG00000018732	rnaseh2b	100	53.548	Xiphophorus_couchianus
ENSSHAG00000016190	RNASEH2B	100	55.195	ENSXMAG00000022554	rnaseh2b	100	54.516	Xiphophorus_maculatus