EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000016219 (Gene tree)
Gene ID: 100917791
Gene Symbol: DDX60
Alias: FLJ20035
Full Name: probable ATP-dependent RNA helicase DDX60
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 122094 bases
Position: chrGL864799.1:2076778-2198871
Accession: 100917791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000019104	ResIII	PF04851.15	3.6e-11	1	1
ENSSHAP00000019105	ResIII	PF04851.15	5.3e-11	1	1
ENSSHAP00000019104	DEAD	PF00270.29	8.9e-18	1	1
ENSSHAP00000019105	DEAD	PF00270.29	9.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000019260	DDX60-201	6422	-	ENSSHAP00000019104	1712 (aa)	-	G3WUJ9
ENSSHAT00000019261	DDX60-202	6398	XM_012552124	ENSSHAP00000019105	1708 (aa)	XP_012407578	G3WUK0

Gene Model

Click here to download ENSSHAG00000016219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016219	DDX60	99	63.829	ENSG00000137628	DDX60	99	65.714	Homo_sapiens
ENSSHAG00000016219	DDX60	99	64.052	ENSAMEG00000013429	DDX60	99	64.052	Ailuropoda_melanoleuca
ENSSHAG00000016219	DDX60	82	56.568	ENSAPLG00000007120	DDX60	100	56.728	Anas_platyrhynchos
ENSSHAG00000016219	DDX60	99	54.540	ENSACAG00000016010	DDX60	97	54.540	Anolis_carolinensis
ENSSHAG00000016219	DDX60	99	64.052	ENSANAG00000030883	DDX60	100	66.243	Aotus_nancymaae
ENSSHAG00000016219	DDX60	99	64.353	ENSCJAG00000004726	DDX60	100	66.737	Callithrix_jacchus
ENSSHAG00000016219	DDX60	100	63.811	ENSCAFG00000009003	DDX60	100	63.902	Canis_familiaris
ENSSHAG00000016219	DDX60	59	63.095	ENSTSYG00000011545	-	99	63.618	Carlito_syrichta
ENSSHAG00000016219	DDX60	95	55.993	ENSCAPG00000006504	DDX60	100	55.185	Cavia_aperea
ENSSHAG00000016219	DDX60	97	62.756	ENSCPOG00000008326	DDX60	97	62.300	Cavia_porcellus
ENSSHAG00000016219	DDX60	99	64.524	ENSCCAG00000034674	DDX60	99	64.524	Cebus_capucinus
ENSSHAG00000016219	DDX60	99	64.164	ENSCATG00000038859	DDX60	99	64.164	Cercocebus_atys
ENSSHAG00000016219	DDX60	100	63.054	ENSCLAG00000015332	DDX60	99	63.054	Chinchilla_lanigera
ENSSHAG00000016219	DDX60	99	64.106	ENSCSAG00000003155	DDX60	99	64.106	Chlorocebus_sabaeus
ENSSHAG00000016219	DDX60	98	58.582	ENSCPBG00000027534	DDX60	95	58.582	Chrysemys_picta_bellii
ENSSHAG00000016219	DDX60	92	63.499	ENSCPBG00000001510	-	99	63.554	Chrysemys_picta_bellii
ENSSHAG00000016219	DDX60	99	64.302	ENSCANG00000032267	DDX60	99	64.302	Colobus_angolensis_palliatus
ENSSHAG00000016219	DDX60	99	64.047	ENSCGRG00001018201	Ddx60	99	64.047	Cricetulus_griseus_chok1gshd
ENSSHAG00000016219	DDX60	99	64.047	ENSCGRG00000005295	Ddx60	99	64.047	Cricetulus_griseus_crigri
ENSSHAG00000016219	DDX60	99	65.105	ENSDNOG00000008454	DDX60	99	65.105	Dasypus_novemcinctus
ENSSHAG00000016219	DDX60	99	65.378	ENSEASG00005021849	DDX60	100	64.524	Equus_asinus_asinus
ENSSHAG00000016219	DDX60	97	64.741	ENSECAG00000024167	DDX60	95	64.741	Equus_caballus
ENSSHAG00000016219	DDX60	99	51.654	ENSECAG00000032492	-	95	51.656	Equus_caballus
ENSSHAG00000016219	DDX60	95	53.391	ENSEEUG00000010236	DDX60	95	53.391	Erinaceus_europaeus
ENSSHAG00000016219	DDX60	100	63.928	ENSFCAG00000010766	DDX60	100	63.960	Felis_catus
ENSSHAG00000016219	DDX60	99	53.551	ENSGALG00000009639	DDX60	94	53.551	Gallus_gallus
ENSSHAG00000016219	DDX60	94	70.245	ENSGGOG00000012801	DDX60	99	70.245	Gorilla_gorilla
ENSSHAG00000016219	DDX60	83	61.636	ENSHGLG00000013790	DDX60	99	62.049	Heterocephalus_glaber_female
ENSSHAG00000016219	DDX60	83	61.636	ENSHGLG00100002763	-	99	62.049	Heterocephalus_glaber_male
ENSSHAG00000016219	DDX60	86	63.760	ENSSTOG00000016257	DDX60	99	63.896	Ictidomys_tridecemlineatus
ENSSHAG00000016219	DDX60	72	55.662	ENSLACG00000017399	DDX60	99	55.662	Latimeria_chalumnae
ENSSHAG00000016219	DDX60	99	64.164	ENSMFAG00000016136	DDX60	99	64.164	Macaca_fascicularis
ENSSHAG00000016219	DDX60	99	64.106	ENSMMUG00000001880	DDX60	99	64.106	Macaca_mulatta
ENSSHAG00000016219	DDX60	99	61.183	ENSMNEG00000030573	DDX60	99	61.183	Macaca_nemestrina
ENSSHAG00000016219	DDX60	99	64.206	ENSMLEG00000030919	DDX60	100	64.320	Mandrillus_leucophaeus
ENSSHAG00000016219	DDX60	99	53.986	ENSMGAG00000002432	DDX60	100	54.172	Meleagris_gallopavo
ENSSHAG00000016219	DDX60	99	63.006	ENSMAUG00000016664	Ddx60	99	63.006	Mesocricetus_auratus
ENSSHAG00000016219	DDX60	99	62.221	ENSMICG00000013542	DDX60	100	62.221	Microcebus_murinus
ENSSHAG00000016219	DDX60	99	61.927	ENSMOCG00000007646	-	99	61.927	Microtus_ochrogaster
ENSSHAG00000016219	DDX60	99	57.821	ENSMOCG00000008571	-	99	59.344	Microtus_ochrogaster
ENSSHAG00000016219	DDX60	100	77.525	ENSMODG00000002645	DDX60	99	77.914	Monodelphis_domestica
ENSSHAG00000016219	DDX60	99	62.463	MGP_CAROLIEiJ_G0031080	Ddx60	99	62.463	Mus_caroli
ENSSHAG00000016219	DDX60	99	62.478	ENSMUSG00000037921	Ddx60	99	62.478	Mus_musculus
ENSSHAG00000016219	DDX60	100	64.356	ENSMPUG00000007710	DDX60	100	64.507	Mustela_putorius_furo
ENSSHAG00000016219	DDX60	100	64.552	ENSMLUG00000007300	DDX60	99	65.038	Myotis_lucifugus
ENSSHAG00000016219	DDX60	99	63.417	ENSNLEG00000006542	DDX60	99	63.417	Nomascus_leucogenys
ENSSHAG00000016219	DDX60	69	52.521	ENSOANG00000028702	-	98	52.521	Ornithorhynchus_anatinus
ENSSHAG00000016219	DDX60	90	59.741	ENSOANG00000007454	DDX60	99	59.935	Ornithorhynchus_anatinus
ENSSHAG00000016219	DDX60	60	51.315	ENSOCUG00000022101	-	100	51.717	Oryctolagus_cuniculus
ENSSHAG00000016219	DDX60	100	63.753	ENSOCUG00000006355	DDX60	100	63.843	Oryctolagus_cuniculus
ENSSHAG00000016219	DDX60	98	50.412	ENSOCUG00000020913	-	99	50.441	Oryctolagus_cuniculus
ENSSHAG00000016219	DDX60	69	61.993	ENSPPAG00000040254	-	99	61.993	Pan_paniscus
ENSSHAG00000016219	DDX60	99	64.596	ENSPPRG00000009286	DDX60	99	64.596	Panthera_pardus
ENSSHAG00000016219	DDX60	99	64.654	ENSPTIG00000022042	DDX60	99	64.654	Panthera_tigris_altaica
ENSSHAG00000016219	DDX60	99	64.063	ENSPTRG00000016581	DDX60	99	64.063	Pan_troglodytes
ENSSHAG00000016219	DDX60	99	64.164	ENSPANG00000019535	DDX60	99	64.164	Papio_anubis
ENSSHAG00000016219	DDX60	99	58.992	ENSPSIG00000004307	DDX60	99	58.992	Pelodiscus_sinensis
ENSSHAG00000016219	DDX60	99	58.601	ENSPEMG00000023735	-	99	58.601	Peromyscus_maniculatus_bairdii
ENSSHAG00000016219	DDX60	99	61.782	ENSPPYG00000015184	DDX60	99	61.538	Pongo_abelii
ENSSHAG00000016219	DDX60	89	57.099	ENSPCAG00000000925	-	89	57.099	Procavia_capensis
ENSSHAG00000016219	DDX60	77	73.016	ENSPCAG00000002661	-	78	73.016	Procavia_capensis
ENSSHAG00000016219	DDX60	95	66.116	ENSPCOG00000008412	DDX60	98	66.116	Propithecus_coquereli
ENSSHAG00000016219	DDX60	99	61.004	ENSPVAG00000011428	DDX60	99	61.004	Pteropus_vampyrus
ENSSHAG00000016219	DDX60	80	61.002	ENSRNOG00000059097	AABR07025140.1	100	61.002	Rattus_norvegicus
ENSSHAG00000016219	DDX60	95	67.081	ENSRBIG00000034414	DDX60	99	67.160	Rhinopithecus_bieti
ENSSHAG00000016219	DDX60	99	64.047	ENSRROG00000030767	DDX60	99	64.047	Rhinopithecus_roxellana
ENSSHAG00000016219	DDX60	99	62.449	ENSSBOG00000024856	DDX60	99	62.449	Saimiri_boliviensis_boliviensis
ENSSHAG00000016219	DDX60	88	62.264	ENSSARG00000002474	-	91	62.264	Sorex_araneus
ENSSHAG00000016219	DDX60	79	68.736	ENSSPUG00000019257	DDX60	99	68.736	Sphenodon_punctatus
ENSSHAG00000016219	DDX60	100	63.886	ENSSSCG00000009720	DDX60	100	64.344	Sus_scrofa
ENSSHAG00000016219	DDX60	88	68.621	ENSTTRG00000016129	DDX60	88	68.621	Tursiops_truncatus
ENSSHAG00000016219	DDX60	99	64.012	ENSUMAG00000020219	DDX60	99	63.824	Ursus_maritimus
ENSSHAG00000016219	DDX60	100	62.995	ENSVVUG00000023953	DDX60	100	63.084	Vulpes_vulpes
ENSSHAG00000016219	DDX60	99	49.450	ENSXETG00000031597	-	99	49.595	Xenopus_tropicalis