EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000016400 (Gene tree)
Gene ID: 100915901
Gene Symbol: PPARGC1B
Alias: PERC|PGC1B
Full Name: PPARG coactivator 1 beta
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 37199 bases
Position: chrGL834603.1:2153087-2190285
Accession: 30022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000019310	RRM_1	PF00076.22	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000019466	PPARGC1B-201	3033	-	ENSSHAP00000019310	1011 (aa)	-	G3WV55

Gene Model

Click here to download ENSSHAG00000016400's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr04931	Insulin resistance	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016400	PPARGC1B	99	58.565	ENSG00000155846	PPARGC1B	99	58.565	Homo_sapiens
ENSSHAG00000016400	PPARGC1B	99	58.215	ENSAMEG00000005287	PPARGC1B	99	58.539	Ailuropoda_melanoleuca
ENSSHAG00000016400	PPARGC1B	52	50.000	ENSAPLG00000005303	PPARGC1A	56	50.000	Anas_platyrhynchos
ENSSHAG00000016400	PPARGC1B	98	53.189	ENSAPLG00000009977	PPARGC1B	99	54.294	Anas_platyrhynchos
ENSSHAG00000016400	PPARGC1B	97	48.811	ENSACAG00000015737	PPARGC1B	97	49.096	Anolis_carolinensis
ENSSHAG00000016400	PPARGC1B	99	58.142	ENSANAG00000021830	PPARGC1B	99	58.046	Aotus_nancymaae
ENSSHAG00000016400	PPARGC1B	74	38.660	ENSAMXG00000010665	ppargc1b	90	36.196	Astyanax_mexicanus
ENSSHAG00000016400	PPARGC1B	99	57.996	ENSBTAG00000012943	PPARGC1B	99	57.803	Bos_taurus
ENSSHAG00000016400	PPARGC1B	99	58.333	ENSCJAG00000021113	PPARGC1B	98	57.369	Callithrix_jacchus
ENSSHAG00000016400	PPARGC1B	99	57.905	ENSCAFG00000018275	PPARGC1B	99	58.733	Canis_familiaris
ENSSHAG00000016400	PPARGC1B	99	55.905	ENSCAFG00020023524	PPARGC1B	99	56.538	Canis_lupus_dingo
ENSSHAG00000016400	PPARGC1B	99	58.015	ENSCHIG00000004409	PPARGC1B	99	58.111	Capra_hircus
ENSSHAG00000016400	PPARGC1B	97	53.809	ENSTSYG00000034354	PPARGC1B	99	53.418	Carlito_syrichta
ENSSHAG00000016400	PPARGC1B	98	52.845	ENSCAPG00000008859	PPARGC1B	99	52.703	Cavia_aperea
ENSSHAG00000016400	PPARGC1B	99	53.970	ENSCPOG00000001958	PPARGC1B	99	53.832	Cavia_porcellus
ENSSHAG00000016400	PPARGC1B	99	58.117	ENSCCAG00000026909	PPARGC1B	99	58.021	Cebus_capucinus
ENSSHAG00000016400	PPARGC1B	99	56.472	ENSCATG00000030402	PPARGC1B	99	56.663	Cercocebus_atys
ENSSHAG00000016400	PPARGC1B	99	55.048	ENSCLAG00000015452	PPARGC1B	99	56.403	Chinchilla_lanigera
ENSSHAG00000016400	PPARGC1B	97	59.154	ENSCSAG00000011792	PPARGC1B	100	59.055	Chlorocebus_sabaeus
ENSSHAG00000016400	PPARGC1B	63	56.190	ENSCHOG00000005517	-	67	56.190	Choloepus_hoffmanni
ENSSHAG00000016400	PPARGC1B	97	53.405	ENSCPBG00000007891	PPARGC1B	97	54.598	Chrysemys_picta_bellii
ENSSHAG00000016400	PPARGC1B	99	57.744	ENSCANG00000037487	PPARGC1B	99	57.648	Colobus_angolensis_palliatus
ENSSHAG00000016400	PPARGC1B	97	56.392	ENSCGRG00001017949	Ppargc1b	96	55.897	Cricetulus_griseus_chok1gshd
ENSSHAG00000016400	PPARGC1B	98	55.906	ENSCGRG00000008387	Ppargc1b	99	55.413	Cricetulus_griseus_crigri
ENSSHAG00000016400	PPARGC1B	51	52.273	ENSCSEG00000006884	ppargc1a	71	52.273	Cynoglossus_semilaevis
ENSSHAG00000016400	PPARGC1B	78	40.496	ENSDARG00000101569	ppargc1b	80	40.496	Danio_rerio
ENSSHAG00000016400	PPARGC1B	91	68.634	ENSDNOG00000005985	PPARGC1B	98	68.323	Dasypus_novemcinctus
ENSSHAG00000016400	PPARGC1B	99	52.980	ENSDORG00000012605	Ppargc1b	99	53.169	Dipodomys_ordii
ENSSHAG00000016400	PPARGC1B	99	56.584	ENSEASG00005002826	PPARGC1B	99	56.870	Equus_asinus_asinus
ENSSHAG00000016400	PPARGC1B	99	57.280	ENSECAG00000019769	PPARGC1B	83	57.689	Equus_caballus
ENSSHAG00000016400	PPARGC1B	77	60.714	ENSEEUG00000014903	PPARGC1B	84	60.714	Erinaceus_europaeus
ENSSHAG00000016400	PPARGC1B	82	38.182	ENSELUG00000014929	ppargc1b	85	39.241	Esox_lucius
ENSSHAG00000016400	PPARGC1B	97	52.802	ENSFALG00000008858	PPARGC1B	99	53.196	Ficedula_albicollis
ENSSHAG00000016400	PPARGC1B	52	48.485	ENSFALG00000009211	PPARGC1A	57	48.485	Ficedula_albicollis
ENSSHAG00000016400	PPARGC1B	97	54.159	ENSFDAG00000008719	PPARGC1B	99	54.985	Fukomys_damarensis
ENSSHAG00000016400	PPARGC1B	52	50.000	ENSGALG00000042851	PPARGC1A	64	50.000	Gallus_gallus
ENSSHAG00000016400	PPARGC1B	52	43.564	ENSGAGG00000007043	PPARGC1A	56	50.000	Gopherus_agassizii
ENSSHAG00000016400	PPARGC1B	89	64.815	ENSGAGG00000012870	PPARGC1B	96	63.793	Gopherus_agassizii
ENSSHAG00000016400	PPARGC1B	97	59.078	ENSGGOG00000009505	PPARGC1B	99	59.627	Gorilla_gorilla
ENSSHAG00000016400	PPARGC1B	99	54.253	ENSHGLG00000005967	PPARGC1B	99	54.668	Heterocephalus_glaber_female
ENSSHAG00000016400	PPARGC1B	99	51.567	ENSHGLG00100010588	PPARGC1B	99	51.372	Heterocephalus_glaber_male
ENSSHAG00000016400	PPARGC1B	99	55.481	ENSSTOG00000024758	PPARGC1B	99	56.588	Ictidomys_tridecemlineatus
ENSSHAG00000016400	PPARGC1B	99	54.581	ENSJJAG00000018633	Ppargc1b	99	54.746	Jaculus_jaculus
ENSSHAG00000016400	PPARGC1B	97	35.674	ENSLACG00000011232	PPARGC1B	100	36.355	Latimeria_chalumnae
ENSSHAG00000016400	PPARGC1B	85	43.860	ENSLOCG00000012195	ppargc1b	91	43.949	Lepisosteus_oculatus
ENSSHAG00000016400	PPARGC1B	97	58.541	ENSLAFG00000012339	PPARGC1B	98	58.982	Loxodonta_africana
ENSSHAG00000016400	PPARGC1B	99	58.006	ENSMFAG00000042269	PPARGC1B	99	57.910	Macaca_fascicularis
ENSSHAG00000016400	PPARGC1B	99	58.102	ENSMMUG00000004749	PPARGC1B	99	58.006	Macaca_mulatta
ENSSHAG00000016400	PPARGC1B	99	58.006	ENSMNEG00000034121	PPARGC1B	99	57.910	Macaca_nemestrina
ENSSHAG00000016400	PPARGC1B	97	59.055	ENSMLEG00000040973	PPARGC1B	99	58.957	Mandrillus_leucophaeus
ENSSHAG00000016400	PPARGC1B	52	50.758	ENSMGAG00000012485	PPARGC1A	63	50.758	Meleagris_gallopavo
ENSSHAG00000016400	PPARGC1B	82	57.542	ENSMGAG00000003134	PPARGC1B	99	48.563	Meleagris_gallopavo
ENSSHAG00000016400	PPARGC1B	99	53.912	ENSMAUG00000014191	Ppargc1b	99	54.103	Mesocricetus_auratus
ENSSHAG00000016400	PPARGC1B	99	56.785	ENSMICG00000002702	PPARGC1B	99	57.225	Microcebus_murinus
ENSSHAG00000016400	PPARGC1B	99	54.362	ENSMOCG00000014885	Ppargc1b	99	53.773	Microtus_ochrogaster
ENSSHAG00000016400	PPARGC1B	97	87.017	ENSMODG00000009891	PPARGC1B	99	86.614	Monodelphis_domestica
ENSSHAG00000016400	PPARGC1B	99	55.163	MGP_CAROLIEiJ_G0022323	Ppargc1b	99	54.685	Mus_caroli
ENSSHAG00000016400	PPARGC1B	99	55.258	ENSMUSG00000033871	Ppargc1b	99	54.780	Mus_musculus
ENSSHAG00000016400	PPARGC1B	99	53.592	MGP_PahariEiJ_G0019053	Ppargc1b	99	53.686	Mus_pahari
ENSSHAG00000016400	PPARGC1B	99	55.172	MGP_SPRETEiJ_G0023235	Ppargc1b	99	54.789	Mus_spretus
ENSSHAG00000016400	PPARGC1B	99	57.930	ENSMPUG00000014245	PPARGC1B	99	58.852	Mustela_putorius_furo
ENSSHAG00000016400	PPARGC1B	89	54.662	ENSMLUG00000013169	PPARGC1B	98	55.413	Myotis_lucifugus
ENSSHAG00000016400	PPARGC1B	99	54.898	ENSNGAG00000016998	Ppargc1b	99	54.607	Nannospalax_galili
ENSSHAG00000016400	PPARGC1B	98	58.601	ENSNLEG00000010193	PPARGC1B	98	58.795	Nomascus_leucogenys
ENSSHAG00000016400	PPARGC1B	97	53.498	ENSOPRG00000010017	PPARGC1B	99	53.951	Ochotona_princeps
ENSSHAG00000016400	PPARGC1B	99	52.969	ENSODEG00000004901	PPARGC1B	99	52.874	Octodon_degus
ENSSHAG00000016400	PPARGC1B	97	55.302	ENSOANG00000009368	PPARGC1B	99	55.545	Ornithorhynchus_anatinus
ENSSHAG00000016400	PPARGC1B	97	56.280	ENSOCUG00000013833	PPARGC1B	100	56.280	Oryctolagus_cuniculus
ENSSHAG00000016400	PPARGC1B	97	57.327	ENSOGAG00000015983	PPARGC1B	98	57.564	Otolemur_garnettii
ENSSHAG00000016400	PPARGC1B	98	57.961	ENSOARG00000005658	PPARGC1B	98	57.767	Ovis_aries
ENSSHAG00000016400	PPARGC1B	97	59.430	ENSPPAG00000035226	PPARGC1B	99	59.430	Pan_paniscus
ENSSHAG00000016400	PPARGC1B	99	58.807	ENSPPRG00000004608	PPARGC1B	99	59.465	Panthera_pardus
ENSSHAG00000016400	PPARGC1B	99	59.252	ENSPTIG00000007391	PPARGC1B	99	60.193	Panthera_tigris_altaica
ENSSHAG00000016400	PPARGC1B	99	58.469	ENSPTRG00000017403	PPARGC1B	99	58.469	Pan_troglodytes
ENSSHAG00000016400	PPARGC1B	99	58.006	ENSPANG00000009512	PPARGC1B	99	57.910	Papio_anubis
ENSSHAG00000016400	PPARGC1B	54	41.624	ENSPSIG00000011790	PPARGC1A	57	50.000	Pelodiscus_sinensis
ENSSHAG00000016400	PPARGC1B	99	53.824	ENSPSIG00000008358	PPARGC1B	99	54.033	Pelodiscus_sinensis
ENSSHAG00000016400	PPARGC1B	99	55.000	ENSPEMG00000018822	Ppargc1b	99	54.808	Peromyscus_maniculatus_bairdii
ENSSHAG00000016400	PPARGC1B	89	87.554	ENSPCIG00000020102	PPARGC1B	99	87.554	Phascolarctos_cinereus
ENSSHAG00000016400	PPARGC1B	99	58.278	ENSPPYG00000015938	PPARGC1B	99	58.469	Pongo_abelii
ENSSHAG00000016400	PPARGC1B	72	61.886	ENSPCAG00000012171	PPARGC1B	71	61.886	Procavia_capensis
ENSSHAG00000016400	PPARGC1B	99	57.486	ENSPCOG00000024059	PPARGC1B	99	57.925	Propithecus_coquereli
ENSSHAG00000016400	PPARGC1B	99	57.774	ENSPVAG00000001308	PPARGC1B	99	57.678	Pteropus_vampyrus
ENSSHAG00000016400	PPARGC1B	86	36.478	ENSPNAG00000023871	ppargc1b	93	36.076	Pygocentrus_nattereri
ENSSHAG00000016400	PPARGC1B	99	55.438	ENSRNOG00000017503	Ppargc1b	99	55.885	Rattus_norvegicus
ENSSHAG00000016400	PPARGC1B	99	57.198	ENSRBIG00000036724	PPARGC1B	99	57.102	Rhinopithecus_bieti
ENSSHAG00000016400	PPARGC1B	97	58.259	ENSRROG00000029594	PPARGC1B	97	58.227	Rhinopithecus_roxellana
ENSSHAG00000016400	PPARGC1B	99	58.389	ENSSBOG00000028738	PPARGC1B	99	58.293	Saimiri_boliviensis_boliviensis
ENSSHAG00000016400	PPARGC1B	51	53.030	ENSSMAG00000011571	ppargc1a	68	53.030	Scophthalmus_maximus
ENSSHAG00000016400	PPARGC1B	98	53.433	ENSSPUG00000019271	PPARGC1B	99	53.386	Sphenodon_punctatus
ENSSHAG00000016400	PPARGC1B	52	50.758	ENSSPUG00000013556	PPARGC1A	57	50.758	Sphenodon_punctatus
ENSSHAG00000016400	PPARGC1B	99	54.796	ENSSSCG00000014437	PPARGC1B	99	55.186	Sus_scrofa
ENSSHAG00000016400	PPARGC1B	97	51.113	ENSTGUG00000000232	PPARGC1B	100	52.811	Taeniopygia_guttata
ENSSHAG00000016400	PPARGC1B	99	59.002	ENSTTRG00000008430	PPARGC1B	100	58.904	Tursiops_truncatus
ENSSHAG00000016400	PPARGC1B	98	58.567	ENSUMAG00000005361	PPARGC1B	99	59.091	Ursus_maritimus
ENSSHAG00000016400	PPARGC1B	99	58.286	ENSVVUG00000014358	PPARGC1B	99	59.921	Vulpes_vulpes
ENSSHAG00000016400	PPARGC1B	97	43.669	ENSXETG00000012711	ppargc1b	99	41.961	Xenopus_tropicalis