EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000016526 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 9964 bases
Position: chrGL834794.1:2210306-2220269
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000019460	R3H	PF01424.22	4.6e-16	1	1
ENSSHAP00000019459	R3H	PF01424.22	5.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000019617	-	1859	-	ENSSHAP00000019460	438 (aa)	-	G3WVK5
ENSSHAT00000019616	-	1961	-	ENSSHAP00000019459	472 (aa)	-	G3WVK4

Gene Model

Click here to download ENSSHAG00000016526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016526's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016526	-	98	53.636	ENSG00000104679	R3HCC1	100	79.070	Homo_sapiens
ENSSHAG00000016526	-	99	51.225	ENSAMEG00000002963	R3HCC1	91	51.225	Ailuropoda_melanoleuca
ENSSHAG00000016526	-	55	43.103	ENSACIG00000017144	r3hcc1	67	42.105	Amphilophus_citrinellus
ENSSHAG00000016526	-	52	75.000	ENSACAG00000016627	R3HCC1	96	46.309	Anolis_carolinensis
ENSSHAG00000016526	-	98	53.061	ENSANAG00000036169	R3HCC1	98	52.184	Aotus_nancymaae
ENSSHAG00000016526	-	99	54.646	ENSBTAG00000025830	R3HCC1	96	54.525	Bos_taurus
ENSSHAG00000016526	-	98	52.596	ENSCJAG00000020118	R3HCC1	97	51.376	Callithrix_jacchus
ENSSHAG00000016526	-	99	52.318	ENSCAFG00000009210	R3HCC1	95	52.759	Canis_familiaris
ENSSHAG00000016526	-	82	47.619	ENSCAFG00020012870	R3HCC1	85	48.148	Canis_lupus_dingo
ENSSHAG00000016526	-	64	74.051	ENSCHIG00000009107	R3HCC1	99	53.173	Capra_hircus
ENSSHAG00000016526	-	98	52.045	ENSTSYG00000000511	R3HCC1	76	52.045	Carlito_syrichta
ENSSHAG00000016526	-	89	38.758	ENSCAPG00000015813	R3HCC1	99	33.708	Cavia_aperea
ENSSHAG00000016526	-	82	69.536	ENSCPOG00000009696	R3HCC1	75	69.536	Cavia_porcellus
ENSSHAG00000016526	-	98	53.394	ENSCCAG00000037811	R3HCC1	98	52.740	Cebus_capucinus
ENSSHAG00000016526	-	98	51.708	ENSCATG00000032971	R3HCC1	98	50.801	Cercocebus_atys
ENSSHAG00000016526	-	98	49.778	ENSCLAG00000015556	R3HCC1	83	49.778	Chinchilla_lanigera
ENSSHAG00000016526	-	98	50.000	ENSCSAG00000016250	R3HCC1	90	52.262	Chlorocebus_sabaeus
ENSSHAG00000016526	-	63	69.935	ENSCHOG00000000396	R3HCC1	95	48.322	Choloepus_hoffmanni
ENSSHAG00000016526	-	98	51.810	ENSCANG00000029441	R3HCC1	98	50.346	Colobus_angolensis_palliatus
ENSSHAG00000016526	-	57	79.787	ENSCGRG00001014977	R3hcc1	50	84.524	Cricetulus_griseus_chok1gshd
ENSSHAG00000016526	-	57	79.787	ENSCGRG00000004454	R3hcc1	50	84.524	Cricetulus_griseus_crigri
ENSSHAG00000016526	-	95	33.042	ENSCSEG00000005748	r3hcc1	98	32.019	Cynoglossus_semilaevis
ENSSHAG00000016526	-	50	86.905	ENSDNOG00000007168	R3HCC1	90	50.787	Dasypus_novemcinctus
ENSSHAG00000016526	-	59	70.946	ENSDORG00000026365	R3hcc1	57	70.946	Dipodomys_ordii
ENSSHAG00000016526	-	57	66.667	ENSETEG00000001147	R3HCC1	95	46.188	Echinops_telfairi
ENSSHAG00000016526	-	99	52.550	ENSEASG00005018782	R3HCC1	80	52.550	Equus_asinus_asinus
ENSSHAG00000016526	-	99	52.328	ENSECAG00000025013	R3HCC1	98	52.328	Equus_caballus
ENSSHAG00000016526	-	97	50.885	ENSEEUG00000011918	R3HCC1	94	51.106	Erinaceus_europaeus
ENSSHAG00000016526	-	53	56.452	ENSELUG00000023650	r3hcc1	86	43.443	Esox_lucius
ENSSHAG00000016526	-	98	52.608	ENSFCAG00000012395	R3HCC1	95	52.727	Felis_catus
ENSSHAG00000016526	-	98	45.363	ENSFDAG00000001572	R3HCC1	57	79.787	Fukomys_damarensis
ENSSHAG00000016526	-	56	37.589	ENSGMOG00000017590	-	73	37.589	Gadus_morhua
ENSSHAG00000016526	-	59	46.528	ENSGAFG00000008747	-	60	46.528	Gambusia_affinis
ENSSHAG00000016526	-	97	32.489	ENSGACG00000008447	r3hcc1	50	50.588	Gasterosteus_aculeatus
ENSSHAG00000016526	-	98	52.715	ENSGGOG00000013817	R3HCC1	98	53.061	Gorilla_gorilla
ENSSHAG00000016526	-	50	48.810	ENSHBUG00000022250	-	63	49.398	Haplochromis_burtoni
ENSSHAG00000016526	-	65	68.000	ENSHGLG00000010517	R3HCC1	91	47.835	Heterocephalus_glaber_female
ENSSHAG00000016526	-	65	68.000	ENSHGLG00100006388	R3HCC1	91	47.835	Heterocephalus_glaber_male
ENSSHAG00000016526	-	53	52.326	ENSIPUG00000024504	r3hcc1	53	52.326	Ictalurus_punctatus
ENSSHAG00000016526	-	60	71.053	ENSSTOG00000027130	R3HCC1	59	70.130	Ictidomys_tridecemlineatus
ENSSHAG00000016526	-	55	84.946	ENSJJAG00000013075	R3hcc1	50	89.286	Jaculus_jaculus
ENSSHAG00000016526	-	97	37.978	ENSLACG00000011894	R3HCC1	97	37.978	Latimeria_chalumnae
ENSSHAG00000016526	-	52	60.000	ENSLOCG00000015442	r3hcc1	57	63.235	Lepisosteus_oculatus
ENSSHAG00000016526	-	64	86.905	ENSLAFG00000016137	R3HCC1	94	49.595	Loxodonta_africana
ENSSHAG00000016526	-	98	51.481	ENSMFAG00000032894	R3HCC1	98	50.575	Macaca_fascicularis
ENSSHAG00000016526	-	98	51.708	ENSMMUG00000016655	R3HCC1	98	50.805	Macaca_mulatta
ENSSHAG00000016526	-	98	52.620	ENSMNEG00000043283	R3HCC1	98	50.575	Macaca_nemestrina
ENSSHAG00000016526	-	98	51.481	ENSMLEG00000030147	R3HCC1	98	50.572	Mandrillus_leucophaeus
ENSSHAG00000016526	-	100	45.414	ENSMGAG00000001356	R3HCC1	92	45.414	Meleagris_gallopavo
ENSSHAG00000016526	-	50	84.524	ENSMAUG00000016096	R3hcc1	51	84.524	Mesocricetus_auratus
ENSSHAG00000016526	-	98	53.153	ENSMICG00000011146	R3HCC1	92	52.928	Microcebus_murinus
ENSSHAG00000016526	-	68	67.532	ENSMOCG00000018508	R3hcc1	61	67.532	Microtus_ochrogaster
ENSSHAG00000016526	-	97	51.322	ENSMODG00000016809	-	100	51.902	Monodelphis_domestica
ENSSHAG00000016526	-	55	81.915	MGP_CAROLIEiJ_G0019467	R3hcc1	56	69.600	Mus_caroli
ENSSHAG00000016526	-	52	86.905	ENSMUSG00000034194	R3hcc1	57	86.905	Mus_musculus
ENSSHAG00000016526	-	55	82.418	MGP_PahariEiJ_G0030484	R3hcc1	55	69.672	Mus_pahari
ENSSHAG00000016526	-	52	86.905	MGP_SPRETEiJ_G0020359	R3hcc1	57	86.905	Mus_spretus
ENSSHAG00000016526	-	99	51.002	ENSMPUG00000003457	R3HCC1	87	51.002	Mustela_putorius_furo
ENSSHAG00000016526	-	51	91.667	ENSMLUG00000000266	R3HCC1	92	52.212	Myotis_lucifugus
ENSSHAG00000016526	-	97	47.473	ENSNGAG00000016747	R3hcc1	98	49.011	Nannospalax_galili
ENSSHAG00000016526	-	90	50.985	ENSNLEG00000015944	R3HCC1	86	50.980	Nomascus_leucogenys
ENSSHAG00000016526	-	62	82.468	ENSMEUG00000010587	R3HCC1	55	91.667	Notamacropus_eugenii
ENSSHAG00000016526	-	67	64.602	ENSOPRG00000013390	R3HCC1	94	46.966	Ochotona_princeps
ENSSHAG00000016526	-	50	86.905	ENSODEG00000007529	R3HCC1	50	86.905	Octodon_degus
ENSSHAG00000016526	-	53	80.233	ENSOANG00000013877	R3HCC1	60	79.762	Ornithorhynchus_anatinus
ENSSHAG00000016526	-	57	66.000	ENSOCUG00000023554	R3HCC1	84	48.975	Oryctolagus_cuniculus
ENSSHAG00000016526	-	52	42.424	ENSOMEG00000000816	r3hcc1	53	55.357	Oryzias_melastigma
ENSSHAG00000016526	-	98	51.685	ENSOGAG00000001291	R3HCC1	90	51.562	Otolemur_garnettii
ENSSHAG00000016526	-	99	53.915	ENSOARG00000010146	R3HCC1	96	53.915	Ovis_aries
ENSSHAG00000016526	-	98	52.727	ENSPPAG00000033165	R3HCC1	98	53.061	Pan_paniscus
ENSSHAG00000016526	-	97	52.500	ENSPPRG00000002522	R3HCC1	98	52.392	Panthera_pardus
ENSSHAG00000016526	-	90	50.493	ENSPTIG00000011230	R3HCC1	53	93.878	Panthera_tigris_altaica
ENSSHAG00000016526	-	98	52.955	ENSPTRG00000020076	R3HCC1	98	51.716	Pan_troglodytes
ENSSHAG00000016526	-	98	51.708	ENSPANG00000000453	R3HCC1	98	51.030	Papio_anubis
ENSSHAG00000016526	-	88	34.171	ENSPKIG00000014426	-	94	34.171	Paramormyrops_kingsleyae
ENSSHAG00000016526	-	50	78.571	ENSPSIG00000017664	R3HCC1	60	78.571	Pelodiscus_sinensis
ENSSHAG00000016526	-	56	84.524	ENSPEMG00000007118	R3hcc1	54	84.524	Peromyscus_maniculatus_bairdii
ENSSHAG00000016526	-	52	51.190	ENSPFOG00000022301	r3hcc1	51	50.575	Poecilia_formosa
ENSSHAG00000016526	-	55	45.631	ENSPLAG00000010794	r3hcc1	51	50.575	Poecilia_latipinna
ENSSHAG00000016526	-	52	51.190	ENSPMEG00000022515	r3hcc1	51	50.575	Poecilia_mexicana
ENSSHAG00000016526	-	96	34.234	ENSPREG00000000713	r3hcc1	90	34.163	Poecilia_reticulata
ENSSHAG00000016526	-	90	50.617	ENSPPYG00000018436	R3HCC1	98	51.106	Pongo_abelii
ENSSHAG00000016526	-	62	74.497	ENSPCAG00000012229	R3HCC1	51	85.714	Procavia_capensis
ENSSHAG00000016526	-	97	53.061	ENSPCOG00000027554	R3HCC1	98	53.061	Propithecus_coquereli
ENSSHAG00000016526	-	99	51.078	ENSPVAG00000009829	R3HCC1	62	90.476	Pteropus_vampyrus
ENSSHAG00000016526	-	53	51.515	ENSPNAG00000023875	r3hcc1	66	51.515	Pygocentrus_nattereri
ENSSHAG00000016526	-	97	51.936	ENSRBIG00000028045	R3HCC1	98	52.381	Rhinopithecus_bieti
ENSSHAG00000016526	-	98	52.045	ENSRROG00000031126	R3HCC1	98	50.801	Rhinopithecus_roxellana
ENSSHAG00000016526	-	97	52.174	ENSSBOG00000022590	R3HCC1	98	52.164	Saimiri_boliviensis_boliviensis
ENSSHAG00000016526	-	64	42.069	ENSSFOG00015013507	r3hcc1	75	42.069	Scleropages_formosus
ENSSHAG00000016526	-	92	30.787	ENSSMAG00000008647	r3hcc1	98	30.735	Scophthalmus_maximus
ENSSHAG00000016526	-	99	54.545	ENSSSCG00000039915	-	93	54.545	Sus_scrofa
ENSSHAG00000016526	-	98	47.285	ENSSSCG00000037347	-	89	47.285	Sus_scrofa
ENSSHAG00000016526	-	51	83.333	ENSTTRG00000012247	R3HCC1	94	46.622	Tursiops_truncatus
ENSSHAG00000016526	-	97	51.591	ENSUAMG00000007344	R3HCC1	98	51.591	Ursus_americanus
ENSSHAG00000016526	-	99	52.318	ENSVVUG00000005056	R3HCC1	95	52.759	Vulpes_vulpes
ENSSHAG00000016526	-	51	48.750	ENSXCOG00000017626	r3hcc1	50	48.750	Xiphophorus_couchianus
ENSSHAG00000016526	-	55	47.000	ENSXMAG00000018375	r3hcc1	61	45.833	Xiphophorus_maculatus