EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000016596 (Gene tree)
Gene ID: 100922627
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 52176 bases
Position: chrGL849636.1:2244853-2297028
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000019543	MA3	PF02847.17	3.3e-24	1	1
ENSSHAP00000019543	MIF4G	PF02854.19	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000019700	-	2640	-	ENSSHAP00000019543	879 (aa)	-	G3WVT8

Gene Model

Click here to download ENSSHAG00000016596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000016596	-	72	76.972	ENSSHAG00000004040	-	86	76.656

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016596	-	99	79.049	ENSG00000163510	CWC22	97	79.728	Homo_sapiens
ENSSHAG00000016596	-	65	78.571	ENSAPOG00000004200	cwc22	94	63.765	Acanthochromis_polyacanthus
ENSSHAG00000016596	-	99	79.049	ENSAMEG00000011004	CWC22	97	79.615	Ailuropoda_melanoleuca
ENSSHAG00000016596	-	67	82.935	ENSACIG00000020055	cwc22	94	66.170	Amphilophus_citrinellus
ENSSHAG00000016596	-	66	82.363	ENSAPEG00000002673	cwc22	59	81.741	Amphiprion_percula
ENSSHAG00000016596	-	67	81.431	ENSATEG00000005176	cwc22	57	81.647	Anabas_testudineus
ENSSHAG00000016596	-	99	71.896	ENSACAG00000009438	CWC22	97	72.460	Anolis_carolinensis
ENSSHAG00000016596	-	99	79.138	ENSANAG00000028324	CWC22	97	80.045	Aotus_nancymaae
ENSSHAG00000016596	-	67	81.090	ENSACLG00000025447	cwc22	86	78.965	Astatotilapia_calliptera
ENSSHAG00000016596	-	50	88.288	ENSAMXG00000014957	cwc22	60	81.061	Astyanax_mexicanus
ENSSHAG00000016596	-	99	77.010	ENSBTAG00000021726	CWC22	96	77.463	Bos_taurus
ENSSHAG00000016596	-	61	55.535	WBGene00002957	let-858	64	54.124	Caenorhabditis_elegans
ENSSHAG00000016596	-	99	78.822	ENSCAFG00000014160	CWC22	96	79.388	Canis_familiaris
ENSSHAG00000016596	-	92	86.616	ENSCAFG00020007223	CWC22	94	87.626	Canis_lupus_dingo
ENSSHAG00000016596	-	99	77.350	ENSCHIG00000017150	CWC22	96	78.029	Capra_hircus
ENSSHAG00000016596	-	99	79.157	ENSTSYG00000000218	-	96	79.841	Carlito_syrichta
ENSSHAG00000016596	-	96	70.130	ENSTSYG00000026635	-	96	69.894	Carlito_syrichta
ENSSHAG00000016596	-	96	71.614	ENSTSYG00000035591	-	99	71.260	Carlito_syrichta
ENSSHAG00000016596	-	99	70.413	ENSTSYG00000028686	-	98	69.686	Carlito_syrichta
ENSSHAG00000016596	-	93	75.887	ENSCAPG00000002064	CWC22	96	75.887	Cavia_aperea
ENSSHAG00000016596	-	98	77.842	ENSCPOG00000007492	CWC22	97	78.186	Cavia_porcellus
ENSSHAG00000016596	-	99	75.513	ENSCCAG00000021239	CWC22	97	75.626	Cebus_capucinus
ENSSHAG00000016596	-	99	79.162	ENSCATG00000035788	CWC22	97	79.728	Cercocebus_atys
ENSSHAG00000016596	-	98	78.261	ENSCLAG00000011118	CWC22	96	78.604	Chinchilla_lanigera
ENSSHAG00000016596	-	99	79.049	ENSCSAG00000012925	CWC22	97	79.615	Chlorocebus_sabaeus
ENSSHAG00000016596	-	87	80.189	ENSCHOG00000006362	CWC22	84	80.189	Choloepus_hoffmanni
ENSSHAG00000016596	-	98	76.005	ENSCPBG00000001765	CWC22	97	75.964	Chrysemys_picta_bellii
ENSSHAG00000016596	-	64	67.077	ENSCING00000008865	-	72	66.725	Ciona_intestinalis
ENSSHAG00000016596	-	62	66.972	ENSCSAVG00000003537	-	92	68.443	Ciona_savignyi
ENSSHAG00000016596	-	99	79.043	ENSCANG00000013762	CWC22	97	80.182	Colobus_angolensis_palliatus
ENSSHAG00000016596	-	99	76.844	ENSCGRG00001017005	-	87	89.937	Cricetulus_griseus_chok1gshd
ENSSHAG00000016596	-	99	76.844	ENSCGRG00000001934	-	97	77.299	Cricetulus_griseus_crigri
ENSSHAG00000016596	-	64	73.628	ENSCSEG00000005257	cwc22	63	72.774	Cynoglossus_semilaevis
ENSSHAG00000016596	-	67	76.960	ENSCVAG00000009836	cwc22	56	82.931	Cyprinodon_variegatus
ENSSHAG00000016596	-	66	81.678	ENSDARG00000014008	cwc22	83	68.005	Danio_rerio
ENSSHAG00000016596	-	99	78.668	ENSDNOG00000003020	-	97	78.555	Dasypus_novemcinctus
ENSSHAG00000016596	-	68	68.874	ENSDNOG00000032640	-	80	69.811	Dasypus_novemcinctus
ENSSHAG00000016596	-	99	76.663	ENSDORG00000011483	-	97	77.452	Dipodomys_ordii
ENSSHAG00000016596	-	72	78.459	ENSETEG00000013355	CWC22	88	79.088	Echinops_telfairi
ENSSHAG00000016596	-	99	79.502	ENSEASG00005022287	CWC22	96	79.275	Equus_asinus_asinus
ENSSHAG00000016596	-	99	78.935	ENSECAG00000010769	CWC22	96	79.388	Equus_caballus
ENSSHAG00000016596	-	77	92.857	ENSEEUG00000005336	CWC22	74	92.857	Erinaceus_europaeus
ENSSHAG00000016596	-	94	65.581	ENSELUG00000010536	cwc22	92	77.327	Esox_lucius
ENSSHAG00000016596	-	99	79.049	ENSFCAG00000018982	CWC22	96	79.615	Felis_catus
ENSSHAG00000016596	-	96	72.338	ENSFALG00000003495	CWC22	96	70.942	Ficedula_albicollis
ENSSHAG00000016596	-	98	78.629	ENSFDAG00000010857	CWC22	96	78.857	Fukomys_damarensis
ENSSHAG00000016596	-	63	84.392	ENSFHEG00000009620	cwc22	77	68.000	Fundulus_heteroclitus
ENSSHAG00000016596	-	69	78.783	ENSGMOG00000009084	cwc22	92	81.647	Gadus_morhua
ENSSHAG00000016596	-	99	69.967	ENSGALG00000009001	CWC22	96	71.032	Gallus_gallus
ENSSHAG00000016596	-	63	84.477	ENSGAFG00000021155	cwc22	66	84.505	Gambusia_affinis
ENSSHAG00000016596	-	67	81.261	ENSGACG00000002071	cwc22	69	81.990	Gasterosteus_aculeatus
ENSSHAG00000016596	-	99	76.444	ENSGAGG00000013471	CWC22	97	75.085	Gopherus_agassizii
ENSSHAG00000016596	-	99	79.162	ENSGGOG00000012484	CWC22	97	79.841	Gorilla_gorilla
ENSSHAG00000016596	-	65	80.175	ENSHBUG00000010504	cwc22	63	81.495	Haplochromis_burtoni
ENSSHAG00000016596	-	98	78.400	ENSHGLG00000005692	CWC22	96	78.171	Heterocephalus_glaber_female
ENSSHAG00000016596	-	98	78.400	ENSHGLG00100016497	CWC22	91	87.893	Heterocephalus_glaber_male
ENSSHAG00000016596	-	65	81.818	ENSHCOG00000004206	cwc22	68	80.584	Hippocampus_comes
ENSSHAG00000016596	-	63	85.971	ENSIPUG00000005831	cwc22	61	83.477	Ictalurus_punctatus
ENSSHAG00000016596	-	99	78.798	ENSSTOG00000009788	CWC22	97	79.138	Ictidomys_tridecemlineatus
ENSSHAG00000016596	-	99	77.576	ENSJJAG00000017012	-	97	78.143	Jaculus_jaculus
ENSSHAG00000016596	-	68	80.840	ENSKMAG00000005228	cwc22	57	81.928	Kryptolebias_marmoratus
ENSSHAG00000016596	-	66	81.741	ENSLBEG00000020518	cwc22	85	66.114	Labrus_bergylta
ENSSHAG00000016596	-	69	78.069	ENSLACG00000005916	CWC22	69	68.441	Latimeria_chalumnae
ENSSHAG00000016596	-	94	69.675	ENSLOCG00000006456	cwc22	91	67.265	Lepisosteus_oculatus
ENSSHAG00000016596	-	99	78.290	ENSLAFG00000014802	CWC22	97	78.740	Loxodonta_africana
ENSSHAG00000016596	-	99	80.068	ENSMFAG00000000590	CWC22	96	82.017	Macaca_fascicularis
ENSSHAG00000016596	-	93	80.583	ENSMMUG00000020642	CWC22	95	80.820	Macaca_mulatta
ENSSHAG00000016596	-	99	80.068	ENSMNEG00000034567	CWC22	97	80.181	Macaca_nemestrina
ENSSHAG00000016596	-	99	79.499	ENSMLEG00000042344	CWC22	97	80.638	Mandrillus_leucophaeus
ENSSHAG00000016596	-	68	80.667	ENSMAMG00000018888	cwc22	85	64.726	Mastacembelus_armatus
ENSSHAG00000016596	-	67	81.090	ENSMZEG00005021449	cwc22	83	64.237	Maylandia_zebra
ENSSHAG00000016596	-	97	70.555	ENSMGAG00000009220	CWC22	99	69.657	Meleagris_gallopavo
ENSSHAG00000016596	-	81	74.654	ENSMAUG00000016154	-	95	74.415	Mesocricetus_auratus
ENSSHAG00000016596	-	99	79.499	ENSMICG00000016919	CWC22	96	79.157	Microcebus_murinus
ENSSHAG00000016596	-	64	78.269	ENSMMOG00000019720	cwc22	81	77.265	Mola_mola
ENSSHAG00000016596	-	63	84.079	ENSMODG00000020117	-	100	84.079	Monodelphis_domestica
ENSSHAG00000016596	-	63	84.022	ENSMODG00000003711	-	100	84.022	Monodelphis_domestica
ENSSHAG00000016596	-	99	89.545	ENSMODG00000010233	-	97	90.795	Monodelphis_domestica
ENSSHAG00000016596	-	99	76.678	MGP_CAROLIEiJ_G0023696	-	86	88.994	Mus_caroli
ENSSHAG00000016596	-	90	77.239	ENSMUSG00000096729	Gm13695	96	76.741	Mus_musculus
ENSSHAG00000016596	-	90	77.363	ENSMUSG00000096337	Gm13694	96	76.866	Mus_musculus
ENSSHAG00000016596	-	90	77.363	ENSMUSG00000079247	Gm13691	96	76.866	Mus_musculus
ENSSHAG00000016596	-	90	77.363	ENSMUSG00000094125	Gm13698	96	76.866	Mus_musculus
ENSSHAG00000016596	-	90	77.363	ENSMUSG00000096484	Gm13696	96	76.866	Mus_musculus
ENSSHAG00000016596	-	90	77.363	ENSMUSG00000095824	Gm13697	96	76.866	Mus_musculus
ENSSHAG00000016596	-	99	76.477	ENSMUSG00000027014	Cwc22	87	88.994	Mus_musculus
ENSSHAG00000016596	-	90	77.363	ENSMUSG00000094336	Gm13693	96	76.866	Mus_musculus
ENSSHAG00000016596	-	99	76.844	MGP_PahariEiJ_G0025147	-	86	89.465	Mus_pahari
ENSSHAG00000016596	-	99	78.912	ENSMPUG00000002432	CWC22	96	79.705	Mustela_putorius_furo
ENSSHAG00000016596	-	84	81.660	ENSMLUG00000024966	-	93	81.124	Myotis_lucifugus
ENSSHAG00000016596	-	93	80.048	ENSMLUG00000013437	-	98	80.338	Myotis_lucifugus
ENSSHAG00000016596	-	99	70.375	ENSNGAG00000013881	-	89	88.403	Nannospalax_galili
ENSSHAG00000016596	-	99	79.388	ENSNLEG00000006248	CWC22	97	80.068	Nomascus_leucogenys
ENSSHAG00000016596	-	64	85.714	ENSMEUG00000011026	CWC22	99	85.918	Notamacropus_eugenii
ENSSHAG00000016596	-	69	83.065	ENSOPRG00000007844	CWC22	76	83.065	Ochotona_princeps
ENSSHAG00000016596	-	53	87.234	ENSODEG00000005934	-	72	86.809	Octodon_degus
ENSSHAG00000016596	-	63	88.036	ENSODEG00000007673	CWC22	89	87.500	Octodon_degus
ENSSHAG00000016596	-	96	79.181	ENSOANG00000008649	CWC22	100	82.078	Ornithorhynchus_anatinus
ENSSHAG00000016596	-	62	84.375	ENSORLG00000010538	cwc22	66	76.911	Oryzias_latipes
ENSSHAG00000016596	-	62	84.375	ENSORLG00020015117	cwc22	66	76.911	Oryzias_latipes_hni
ENSSHAG00000016596	-	70	78.352	ENSORLG00015018073	cwc22	66	75.692	Oryzias_latipes_hsok
ENSSHAG00000016596	-	66	81.304	ENSOMEG00000015199	cwc22	60	81.271	Oryzias_melastigma
ENSSHAG00000016596	-	99	79.162	ENSOGAG00000015287	CWC22	96	79.955	Otolemur_garnettii
ENSSHAG00000016596	-	99	76.897	ENSOARG00000016905	CWC22	96	77.690	Ovis_aries
ENSSHAG00000016596	-	99	79.841	ENSPPAG00000027833	CWC22	97	80.752	Pan_paniscus
ENSSHAG00000016596	-	99	79.275	ENSPPRG00000001389	CWC22	96	79.841	Panthera_pardus
ENSSHAG00000016596	-	99	79.162	ENSPTIG00000019139	CWC22	96	79.728	Panthera_tigris_altaica
ENSSHAG00000016596	-	99	79.615	ENSPTRG00000012698	CWC22	97	80.294	Pan_troglodytes
ENSSHAG00000016596	-	99	79.385	ENSPANG00000018976	CWC22	97	80.524	Papio_anubis
ENSSHAG00000016596	-	63	84.353	ENSPKIG00000021346	cwc22	81	66.235	Paramormyrops_kingsleyae
ENSSHAG00000016596	-	99	75.596	ENSPSIG00000008632	CWC22	97	75.255	Pelodiscus_sinensis
ENSSHAG00000016596	-	66	73.242	ENSPMGG00000020129	cwc22	62	71.429	Periophthalmus_magnuspinnatus
ENSSHAG00000016596	-	95	73.543	ENSPEMG00000023936	-	89	85.304	Peromyscus_maniculatus_bairdii
ENSSHAG00000016596	-	93	61.697	ENSPMAG00000005914	cwc22	95	64.485	Petromyzon_marinus
ENSSHAG00000016596	-	99	92.677	ENSPCIG00000009903	-	97	92.334	Phascolarctos_cinereus
ENSSHAG00000016596	-	64	84.397	ENSPFOG00000015025	cwc22	76	82.847	Poecilia_formosa
ENSSHAG00000016596	-	64	83.865	ENSPLAG00000021405	cwc22	57	82.333	Poecilia_latipinna
ENSSHAG00000016596	-	66	80.756	ENSPMEG00000007850	cwc22	57	82.504	Poecilia_mexicana
ENSSHAG00000016596	-	64	79.893	ENSPREG00000004312	cwc22	65	80.284	Poecilia_reticulata
ENSSHAG00000016596	-	99	79.502	ENSPPYG00000012986	CWC22	97	80.181	Pongo_abelii
ENSSHAG00000016596	-	99	74.744	ENSPCAG00000011882	CWC22	98	76.223	Procavia_capensis
ENSSHAG00000016596	-	91	77.350	ENSPCOG00000010195	CWC22	96	79.268	Propithecus_coquereli
ENSSHAG00000016596	-	99	78.029	ENSPVAG00000011497	CWC22	96	78.256	Pteropus_vampyrus
ENSSHAG00000016596	-	67	78.365	ENSPNYG00000010435	cwc22	82	78.731	Pundamilia_nyererei
ENSSHAG00000016596	-	99	73.295	ENSRNOG00000038322	LOC500684	97	73.295	Rattus_norvegicus
ENSSHAG00000016596	-	99	74.007	ENSRNOG00000012651	Cwc22	97	74.007	Rattus_norvegicus
ENSSHAG00000016596	-	99	75.257	ENSRBIG00000036751	CWC22	97	76.531	Rhinopithecus_bieti
ENSSHAG00000016596	-	99	78.929	ENSRROG00000037520	CWC22	97	80.068	Rhinopithecus_roxellana
ENSSHAG00000016596	-	57	30.588	YGR278W	-	82	30.196	Saccharomyces_cerevisiae
ENSSHAG00000016596	-	99	77.237	ENSSBOG00000021683	CWC22	97	77.916	Saimiri_boliviensis_boliviensis
ENSSHAG00000016596	-	84	66.090	ENSSFOG00015010559	cwc22	90	65.838	Scleropages_formosus
ENSSHAG00000016596	-	67	79.046	ENSSMAG00000004724	cwc22	58	79.417	Scophthalmus_maximus
ENSSHAG00000016596	-	67	81.008	ENSSDUG00000010656	cwc22	77	68.987	Seriola_dumerili
ENSSHAG00000016596	-	64	83.601	ENSSLDG00000023157	cwc22	82	82.131	Seriola_lalandi_dorsalis
ENSSHAG00000016596	-	59	96.023	ENSSARG00000013596	-	58	96.023	Sorex_araneus
ENSSHAG00000016596	-	99	72.862	ENSSPUG00000006395	CWC22	99	72.634	Sphenodon_punctatus
ENSSHAG00000016596	-	66	82.705	ENSSPAG00000008746	cwc22	76	69.847	Stegastes_partitus
ENSSHAG00000016596	-	99	78.192	ENSSSCG00000016008	CWC22	96	79.096	Sus_scrofa
ENSSHAG00000016596	-	97	72.844	ENSTGUG00000009340	-	98	71.678	Taeniopygia_guttata
ENSSHAG00000016596	-	66	81.507	ENSTRUG00000014411	cwc22	65	76.406	Takifugu_rubripes
ENSSHAG00000016596	-	64	80.174	ENSTNIG00000005074	cwc22	77	78.487	Tetraodon_nigroviridis
ENSSHAG00000016596	-	98	64.747	ENSTBEG00000014539	CWC22	95	64.977	Tupaia_belangeri
ENSSHAG00000016596	-	99	78.798	ENSTTRG00000012142	CWC22	96	79.252	Tursiops_truncatus
ENSSHAG00000016596	-	93	88.714	ENSUAMG00000010342	CWC22	97	88.714	Ursus_americanus
ENSSHAG00000016596	-	99	78.935	ENSUMAG00000016730	CWC22	96	79.502	Ursus_maritimus
ENSSHAG00000016596	-	72	89.796	ENSVPAG00000008565	CWC22	69	90.424	Vicugna_pacos
ENSSHAG00000016596	-	99	78.822	ENSVVUG00000009738	CWC22	97	79.162	Vulpes_vulpes
ENSSHAG00000016596	-	84	73.901	ENSXETG00000014099	cwc22	82	81.094	Xenopus_tropicalis
ENSSHAG00000016596	-	64	83.511	ENSXMAG00000013201	cwc22	57	81.990	Xiphophorus_maculatus