EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000016615 (Gene tree)
Gene ID: 100931894
Gene Symbol: DDX56
Alias: NOH61
Full Name: transmembrane p24 trafficking protein 4
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 16253 bases
Position: chrGL834671.1:2253440-2269692
Accession: 100931894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000019565	DEAD	PF00270.29	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000019723	DDX56-202	690	-	ENSSHAP00000019566	229 (aa)	XP_003757784	G3WVW1
ENSSHAT00000019722	DDX56-201	1428	-	ENSSHAP00000019565	476 (aa)	-	G3WVW0
ENSSHAT00000019724	DDX56-203	699	-	ENSSHAP00000019567	232 (aa)	-	G3WVW2

Gene Model

Click here to download ENSSHAG00000016615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000016615	DDX56	67	31.498	ENSSHAG00000010825	DDX47	56	31.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016615	DDX56	98	84.797	ENSG00000136271	DDX56	90	85.714	Homo_sapiens
ENSSHAG00000016615	DDX56	99	64.271	ENSAPOG00000017113	ddx56	86	64.682	Acanthochromis_polyacanthus
ENSSHAG00000016615	DDX56	99	82.875	ENSAMEG00000017711	DDX56	86	82.875	Ailuropoda_melanoleuca
ENSSHAG00000016615	DDX56	90	59.633	ENSACIG00000013747	ddx56	81	59.459	Amphilophus_citrinellus
ENSSHAG00000016615	DDX56	85	68.599	ENSAOCG00000015447	-	74	68.357	Amphiprion_ocellaris
ENSSHAG00000016615	DDX56	94	65.859	ENSAOCG00000018059	ddx56	84	65.859	Amphiprion_ocellaris
ENSSHAG00000016615	DDX56	97	65.756	ENSAPEG00000007267	ddx56	85	65.690	Amphiprion_percula
ENSSHAG00000016615	DDX56	97	66.247	ENSATEG00000005279	ddx56	85	66.876	Anabas_testudineus
ENSSHAG00000016615	DDX56	99	64.403	ENSACLG00000020113	ddx56	86	65.092	Astatotilapia_calliptera
ENSSHAG00000016615	DDX56	97	61.746	ENSAMXG00000019357	ddx56	86	62.370	Astyanax_mexicanus
ENSSHAG00000016615	DDX56	99	82.875	ENSBTAG00000010602	DDX56	86	83.298	Bos_taurus
ENSSHAG00000016615	DDX56	95	40.041	WBGene00016073	C24H12.4	83	40.041	Caenorhabditis_elegans
ENSSHAG00000016615	DDX56	99	83.579	ENSCJAG00000012233	DDX56	86	83.579	Callithrix_jacchus
ENSSHAG00000016615	DDX56	94	81.655	ENSCAFG00000029295	DDX56	99	81.655	Canis_familiaris
ENSSHAG00000016615	DDX56	99	79.704	ENSCAFG00020019695	DDX56	86	79.704	Canis_lupus_dingo
ENSSHAG00000016615	DDX56	99	83.087	ENSCHIG00000014261	DDX56	86	83.087	Capra_hircus
ENSSHAG00000016615	DDX56	98	83.940	ENSTSYG00000008048	DDX56	85	84.154	Carlito_syrichta
ENSSHAG00000016615	DDX56	99	82.452	ENSCAPG00000006286	DDX56	99	82.452	Cavia_aperea
ENSSHAG00000016615	DDX56	99	82.241	ENSCPOG00000003359	DDX56	86	82.241	Cavia_porcellus
ENSSHAG00000016615	DDX56	99	82.526	ENSCCAG00000025303	DDX56	86	82.526	Cebus_capucinus
ENSSHAG00000016615	DDX56	98	85.011	ENSCATG00000039389	DDX56	85	85.011	Cercocebus_atys
ENSSHAG00000016615	DDX56	99	83.122	ENSCLAG00000007666	DDX56	86	83.122	Chinchilla_lanigera
ENSSHAG00000016615	DDX56	98	85.011	ENSCSAG00000015636	DDX56	85	85.011	Chlorocebus_sabaeus
ENSSHAG00000016615	DDX56	99	70.954	ENSCPBG00000024556	DDX56	86	70.954	Chrysemys_picta_bellii
ENSSHAG00000016615	DDX56	89	56.845	ENSCING00000005185	-	83	57.309	Ciona_intestinalis
ENSSHAG00000016615	DDX56	88	55.149	ENSCSAVG00000011266	-	84	56.028	Ciona_savignyi
ENSSHAG00000016615	DDX56	98	84.582	ENSCANG00000028187	DDX56	85	84.582	Colobus_angolensis_palliatus
ENSSHAG00000016615	DDX56	99	82.839	ENSCGRG00001019019	Ddx56	86	82.839	Cricetulus_griseus_chok1gshd
ENSSHAG00000016615	DDX56	99	82.839	ENSCGRG00000011870	Ddx56	86	82.839	Cricetulus_griseus_crigri
ENSSHAG00000016615	DDX56	97	64.182	ENSCSEG00000008368	ddx56	85	65.010	Cynoglossus_semilaevis
ENSSHAG00000016615	DDX56	97	65.966	ENSCVAG00000006499	ddx56	85	66.387	Cyprinodon_variegatus
ENSSHAG00000016615	DDX56	97	64.421	ENSDARG00000020913	ddx56	85	65.690	Danio_rerio
ENSSHAG00000016615	DDX56	99	83.263	ENSDNOG00000036526	DDX56	99	83.263	Dasypus_novemcinctus
ENSSHAG00000016615	DDX56	89	49.070	FBgn0001565	Hlc	76	49.070	Drosophila_melanogaster
ENSSHAG00000016615	DDX56	88	58.195	ENSETEG00000019559	-	87	57.245	Echinops_telfairi
ENSSHAG00000016615	DDX56	67	86.282	ENSETEG00000002969	-	58	86.282	Echinops_telfairi
ENSSHAG00000016615	DDX56	97	59.329	ENSEBUG00000009986	ddx56	86	60.084	Eptatretus_burgeri
ENSSHAG00000016615	DDX56	98	84.582	ENSEASG00005017795	DDX56	85	85.011	Equus_asinus_asinus
ENSSHAG00000016615	DDX56	98	84.368	ENSECAG00000019897	DDX56	85	84.797	Equus_caballus
ENSSHAG00000016615	DDX56	99	82.627	ENSEEUG00000004849	DDX56	99	82.627	Erinaceus_europaeus
ENSSHAG00000016615	DDX56	97	67.292	ENSELUG00000004150	ddx56	85	68.344	Esox_lucius
ENSSHAG00000016615	DDX56	99	81.607	ENSFCAG00000010261	DDX56	86	81.607	Felis_catus
ENSSHAG00000016615	DDX56	99	82.030	ENSFDAG00000007128	DDX56	86	82.030	Fukomys_damarensis
ENSSHAG00000016615	DDX56	98	65.817	ENSFHEG00000018008	ddx56	84	69.178	Fundulus_heteroclitus
ENSSHAG00000016615	DDX56	98	61.229	ENSGAFG00000006906	ddx56	84	61.229	Gambusia_affinis
ENSSHAG00000016615	DDX56	96	71.460	ENSGAGG00000006789	DDX56	81	71.460	Gopherus_agassizii
ENSSHAG00000016615	DDX56	98	84.797	ENSGGOG00000012031	DDX56	85	84.797	Gorilla_gorilla
ENSSHAG00000016615	DDX56	90	62.471	ENSHBUG00000015246	ddx56	79	62.472	Haplochromis_burtoni
ENSSHAG00000016615	DDX56	99	82.911	ENSHGLG00000017271	DDX56	86	82.911	Heterocephalus_glaber_female
ENSSHAG00000016615	DDX56	99	82.911	ENSHGLG00100015731	DDX56	86	82.911	Heterocephalus_glaber_male
ENSSHAG00000016615	DDX56	97	65.319	ENSHCOG00000001685	ddx56	85	65.319	Hippocampus_comes
ENSSHAG00000016615	DDX56	99	63.169	ENSIPUG00000006602	ddx56	85	63.169	Ictalurus_punctatus
ENSSHAG00000016615	DDX56	99	83.263	ENSSTOG00000000464	DDX56	86	83.263	Ictidomys_tridecemlineatus
ENSSHAG00000016615	DDX56	99	82.303	ENSJJAG00000014269	Ddx56	86	82.303	Jaculus_jaculus
ENSSHAG00000016615	DDX56	99	63.786	ENSKMAG00000016611	ddx56	86	64.403	Kryptolebias_marmoratus
ENSSHAG00000016615	DDX56	97	65.944	ENSLBEG00000026281	ddx56	86	66.017	Labrus_bergylta
ENSSHAG00000016615	DDX56	98	68.710	ENSLACG00000015551	DDX56	84	69.895	Latimeria_chalumnae
ENSSHAG00000016615	DDX56	98	66.667	ENSLOCG00000015185	ddx56	85	67.149	Lepisosteus_oculatus
ENSSHAG00000016615	DDX56	99	83.795	ENSLAFG00000018206	DDX56	86	83.795	Loxodonta_africana
ENSSHAG00000016615	DDX56	98	85.011	ENSMFAG00000041001	DDX56	85	85.011	Macaca_fascicularis
ENSSHAG00000016615	DDX56	98	85.011	ENSMMUG00000002645	DDX56	85	85.011	Macaca_mulatta
ENSSHAG00000016615	DDX56	98	84.797	ENSMNEG00000028492	DDX56	85	84.797	Macaca_nemestrina
ENSSHAG00000016615	DDX56	98	85.225	ENSMLEG00000043591	DDX56	85	85.225	Mandrillus_leucophaeus
ENSSHAG00000016615	DDX56	99	64.536	ENSMAMG00000007776	ddx56	86	65.844	Mastacembelus_armatus
ENSSHAG00000016615	DDX56	99	64.403	ENSMZEG00005009813	ddx56	86	65.092	Maylandia_zebra
ENSSHAG00000016615	DDX56	99	84.322	ENSMICG00000005550	DDX56	86	84.322	Microcebus_murinus
ENSSHAG00000016615	DDX56	99	81.780	ENSMOCG00000016782	Ddx56	86	81.780	Microtus_ochrogaster
ENSSHAG00000016615	DDX56	88	69.231	ENSMMOG00000009654	ddx56	81	69.930	Mola_mola
ENSSHAG00000016615	DDX56	100	85.535	ENSMODG00000016137	DDX56	85	85.744	Monodelphis_domestica
ENSSHAG00000016615	DDX56	62	62.290	ENSMALG00000016910	ddx56	78	62.963	Monopterus_albus
ENSSHAG00000016615	DDX56	99	82.030	MGP_CAROLIEiJ_G0016069	Ddx56	86	82.030	Mus_caroli
ENSSHAG00000016615	DDX56	99	82.664	ENSMUSG00000004393	Ddx56	86	82.664	Mus_musculus
ENSSHAG00000016615	DDX56	99	81.568	MGP_PahariEiJ_G0016822	Ddx56	86	81.568	Mus_pahari
ENSSHAG00000016615	DDX56	99	82.664	MGP_SPRETEiJ_G0016911	Ddx56	86	82.664	Mus_spretus
ENSSHAG00000016615	DDX56	98	82.655	ENSMPUG00000018196	DDX56	75	82.655	Mustela_putorius_furo
ENSSHAG00000016615	DDX56	98	84.797	ENSMLUG00000003509	DDX56	85	84.797	Myotis_lucifugus
ENSSHAG00000016615	DDX56	99	83.789	ENSNGAG00000018785	Ddx56	86	83.789	Nannospalax_galili
ENSSHAG00000016615	DDX56	90	64.651	ENSNBRG00000002656	ddx56	79	64.155	Neolamprologus_brichardi
ENSSHAG00000016615	DDX56	98	85.011	ENSNLEG00000003816	DDX56	85	85.011	Nomascus_leucogenys
ENSSHAG00000016615	DDX56	89	86.256	ENSMEUG00000006788	DDX56	85	86.256	Notamacropus_eugenii
ENSSHAG00000016615	DDX56	99	81.237	ENSOPRG00000000292	-	85	81.237	Ochotona_princeps
ENSSHAG00000016615	DDX56	63	86.711	ENSODEG00000014807	DDX56	80	86.711	Octodon_degus
ENSSHAG00000016615	DDX56	99	66.454	ENSONIG00000011509	ddx56	86	66.454	Oreochromis_niloticus
ENSSHAG00000016615	DDX56	70	69.643	ENSOANG00000015987	-	76	69.643	Ornithorhynchus_anatinus
ENSSHAG00000016615	DDX56	57	84.758	ENSOANG00000010592	-	99	84.758	Ornithorhynchus_anatinus
ENSSHAG00000016615	DDX56	99	70.588	ENSOANG00000006320	-	89	70.798	Ornithorhynchus_anatinus
ENSSHAG00000016615	DDX56	99	80.932	ENSOCUG00000022918	DDX56	86	81.144	Oryctolagus_cuniculus
ENSSHAG00000016615	DDX56	99	67.081	ENSORLG00000001434	ddx56	86	67.081	Oryzias_latipes
ENSSHAG00000016615	DDX56	99	67.078	ENSORLG00020015718	ddx56	84	67.078	Oryzias_latipes_hni
ENSSHAG00000016615	DDX56	99	67.081	ENSORLG00015003004	ddx56	83	67.081	Oryzias_latipes_hsok
ENSSHAG00000016615	DDX56	99	66.253	ENSOMEG00000022072	ddx56	86	66.874	Oryzias_melastigma
ENSSHAG00000016615	DDX56	99	83.298	ENSOGAG00000009981	DDX56	86	83.298	Otolemur_garnettii
ENSSHAG00000016615	DDX56	99	83.721	ENSOARG00000015240	DDX56	97	84.292	Ovis_aries
ENSSHAG00000016615	DDX56	98	80.462	ENSPPAG00000029147	DDX56	85	80.462	Pan_paniscus
ENSSHAG00000016615	DDX56	99	69.182	ENSPPAG00000031263	-	87	68.973	Pan_paniscus
ENSSHAG00000016615	DDX56	99	81.395	ENSPPRG00000014594	DDX56	86	81.395	Panthera_pardus
ENSSHAG00000016615	DDX56	99	80.761	ENSPTIG00000019500	DDX56	92	80.761	Panthera_tigris_altaica
ENSSHAG00000016615	DDX56	99	68.958	ENSPTRG00000052765	-	92	68.750	Pan_troglodytes
ENSSHAG00000016615	DDX56	98	84.582	ENSPTRG00000019147	DDX56	85	84.582	Pan_troglodytes
ENSSHAG00000016615	DDX56	98	84.797	ENSPANG00000002446	DDX56	85	84.797	Papio_anubis
ENSSHAG00000016615	DDX56	99	64.898	ENSPKIG00000018998	ddx56	86	64.898	Paramormyrops_kingsleyae
ENSSHAG00000016615	DDX56	93	67.857	ENSPMGG00000017421	ddx56	83	67.857	Periophthalmus_magnuspinnatus
ENSSHAG00000016615	DDX56	100	97.269	ENSPCIG00000009336	DDX56	86	97.269	Phascolarctos_cinereus
ENSSHAG00000016615	DDX56	98	65.481	ENSPFOG00000018658	ddx56	85	65.900	Poecilia_formosa
ENSSHAG00000016615	DDX56	98	65.481	ENSPLAG00000019208	ddx56	85	65.833	Poecilia_latipinna
ENSSHAG00000016615	DDX56	98	65.481	ENSPMEG00000001775	ddx56	85	65.833	Poecilia_mexicana
ENSSHAG00000016615	DDX56	98	65.481	ENSPREG00000015142	ddx56	85	66.042	Poecilia_reticulata
ENSSHAG00000016615	DDX56	98	85.011	ENSPPYG00000017591	DDX56	85	85.011	Pongo_abelii
ENSSHAG00000016615	DDX56	99	83.158	ENSPCAG00000011499	DDX56	90	83.158	Procavia_capensis
ENSSHAG00000016615	DDX56	99	84.322	ENSPCOG00000024864	DDX56	86	84.322	Propithecus_coquereli
ENSSHAG00000016615	DDX56	86	84.397	ENSPVAG00000000791	DDX56	74	84.397	Pteropus_vampyrus
ENSSHAG00000016615	DDX56	99	64.198	ENSPNYG00000019212	ddx56	86	64.887	Pundamilia_nyererei
ENSSHAG00000016615	DDX56	98	64.669	ENSPNAG00000025446	ddx56	87	65.909	Pygocentrus_nattereri
ENSSHAG00000016615	DDX56	99	82.203	ENSRNOG00000004670	Ddx56	97	82.203	Rattus_norvegicus
ENSSHAG00000016615	DDX56	98	84.797	ENSRBIG00000030140	DDX56	85	84.797	Rhinopithecus_bieti
ENSSHAG00000016615	DDX56	98	84.582	ENSRROG00000044428	DDX56	85	84.582	Rhinopithecus_roxellana
ENSSHAG00000016615	DDX56	96	40.079	YLR276C	-	85	40.668	Saccharomyces_cerevisiae
ENSSHAG00000016615	DDX56	99	83.579	ENSSBOG00000034339	DDX56	86	83.579	Saimiri_boliviensis_boliviensis
ENSSHAG00000016615	DDX56	98	66.457	ENSSFOG00015012795	ddx56	85	66.457	Scleropages_formosus
ENSSHAG00000016615	DDX56	98	64.948	ENSSMAG00000011280	ddx56	86	65.092	Scophthalmus_maximus
ENSSHAG00000016615	DDX56	99	64.066	ENSSDUG00000023597	ddx56	85	66.667	Seriola_dumerili
ENSSHAG00000016615	DDX56	99	64.066	ENSSLDG00000018369	ddx56	85	66.667	Seriola_lalandi_dorsalis
ENSSHAG00000016615	DDX56	74	82.670	ENSSARG00000014363	DDX56	65	81.844	Sorex_araneus
ENSSHAG00000016615	DDX56	99	71.579	ENSSPUG00000000784	DDX56	83	71.579	Sphenodon_punctatus
ENSSHAG00000016615	DDX56	90	68.721	ENSSPAG00000009392	ddx56	82	68.834	Stegastes_partitus
ENSSHAG00000016615	DDX56	98	83.761	ENSSSCG00000016745	DDX56	85	83.761	Sus_scrofa
ENSSHAG00000016615	DDX56	99	64.119	ENSTRUG00000018623	ddx56	87	63.934	Takifugu_rubripes
ENSSHAG00000016615	DDX56	99	62.398	ENSTNIG00000013593	ddx56	87	62.805	Tetraodon_nigroviridis
ENSSHAG00000016615	DDX56	99	84.110	ENSTBEG00000007119	DDX56	86	84.110	Tupaia_belangeri
ENSSHAG00000016615	DDX56	99	83.122	ENSTTRG00000010552	DDX56	99	83.122	Tursiops_truncatus
ENSSHAG00000016615	DDX56	99	82.415	ENSUAMG00000014194	DDX56	86	82.415	Ursus_americanus
ENSSHAG00000016615	DDX56	99	82.415	ENSUMAG00000009666	DDX56	86	82.415	Ursus_maritimus
ENSSHAG00000016615	DDX56	99	81.184	ENSVVUG00000011905	DDX56	86	81.184	Vulpes_vulpes
ENSSHAG00000016615	DDX56	97	67.857	ENSXETG00000019000	ddx56	86	68.211	Xenopus_tropicalis
ENSSHAG00000016615	DDX56	98	64.592	ENSXCOG00000017413	ddx56	84	64.592	Xiphophorus_couchianus
ENSSHAG00000016615	DDX56	98	64.780	ENSXMAG00000018749	ddx56	85	64.990	Xiphophorus_maculatus