EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000016810 (Gene tree)
Gene ID: 100924871
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 73079 bases
Position: chrGL834659.1:2357435-2430513
Accession: 100924871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000019805	PRP1_N	PF06424.12	1.2e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000019962	PRPF6-201	4831	-	ENSSHAP00000019805	941 (aa)	XP_003757601	G3WWK0

Gene Model

Click here to download ENSSHAG00000016810's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016810's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016810	PRPF6	100	97.768	ENSG00000101161	PRPF6	100	97.768	Homo_sapiens
ENSSHAG00000016810	PRPF6	100	92.986	ENSAPOG00000010395	prpf6	96	93.411	Acanthochromis_polyacanthus
ENSSHAG00000016810	PRPF6	100	97.452	ENSAMEG00000001916	PRPF6	99	97.452	Ailuropoda_melanoleuca
ENSSHAG00000016810	PRPF6	100	92.880	ENSACIG00000019862	prpf6	96	93.305	Amphilophus_citrinellus
ENSSHAG00000016810	PRPF6	100	93.092	ENSAOCG00000012988	prpf6	96	93.518	Amphiprion_ocellaris
ENSSHAG00000016810	PRPF6	100	86.397	ENSAPEG00000008301	prpf6	100	86.929	Amphiprion_percula
ENSSHAG00000016810	PRPF6	100	92.561	ENSATEG00000005581	prpf6	96	92.986	Anabas_testudineus
ENSSHAG00000016810	PRPF6	100	98.618	ENSACAG00000006464	PRPF6	95	98.618	Anolis_carolinensis
ENSSHAG00000016810	PRPF6	100	97.875	ENSANAG00000012661	PRPF6	100	98.587	Aotus_nancymaae
ENSSHAG00000016810	PRPF6	100	92.774	ENSACLG00000025875	prpf6	96	93.199	Astatotilapia_calliptera
ENSSHAG00000016810	PRPF6	99	93.298	ENSAMXG00000001929	prpf6	96	93.723	Astyanax_mexicanus
ENSSHAG00000016810	PRPF6	100	98.300	ENSBTAG00000011656	PRPF6	100	98.300	Bos_taurus
ENSSHAG00000016810	PRPF6	100	97.875	ENSCJAG00000010616	PRPF6	100	97.875	Callithrix_jacchus
ENSSHAG00000016810	PRPF6	100	98.512	ENSCAFG00000013165	PRPF6	100	98.512	Canis_familiaris
ENSSHAG00000016810	PRPF6	100	98.512	ENSCAFG00020002050	PRPF6	100	98.512	Canis_lupus_dingo
ENSSHAG00000016810	PRPF6	100	98.300	ENSCHIG00000018187	PRPF6	100	98.300	Capra_hircus
ENSSHAG00000016810	PRPF6	100	98.193	ENSTSYG00000007814	PRPF6	100	98.193	Carlito_syrichta
ENSSHAG00000016810	PRPF6	97	97.492	ENSCAPG00000015077	PRPF6	100	97.492	Cavia_aperea
ENSSHAG00000016810	PRPF6	100	98.725	ENSCPOG00000007518	PRPF6	100	98.725	Cavia_porcellus
ENSSHAG00000016810	PRPF6	100	94.474	ENSCCAG00000024564	PRPF6	100	94.474	Cebus_capucinus
ENSSHAG00000016810	PRPF6	100	97.875	ENSCATG00000037473	PRPF6	100	97.875	Cercocebus_atys
ENSSHAG00000016810	PRPF6	100	94.793	ENSCLAG00000003854	PRPF6	100	94.793	Chinchilla_lanigera
ENSSHAG00000016810	PRPF6	100	92.608	ENSCSAG00000016742	PRPF6	100	92.608	Chlorocebus_sabaeus
ENSSHAG00000016810	PRPF6	84	81.463	ENSCHOG00000003315	-	100	81.463	Choloepus_hoffmanni
ENSSHAG00000016810	PRPF6	100	99.256	ENSCPBG00000013964	PRPF6	96	99.256	Chrysemys_picta_bellii
ENSSHAG00000016810	PRPF6	99	73.890	ENSCING00000008817	-	99	73.890	Ciona_intestinalis
ENSSHAG00000016810	PRPF6	100	97.662	ENSCANG00000038230	PRPF6	100	97.662	Colobus_angolensis_palliatus
ENSSHAG00000016810	PRPF6	100	98.512	ENSCGRG00001022666	Prpf6	100	98.512	Cricetulus_griseus_chok1gshd
ENSSHAG00000016810	PRPF6	100	87.673	ENSCSEG00000018561	prpf6	100	88.098	Cynoglossus_semilaevis
ENSSHAG00000016810	PRPF6	100	92.880	ENSCVAG00000010550	prpf6	96	93.305	Cyprinodon_variegatus
ENSSHAG00000016810	PRPF6	100	92.986	ENSDARG00000091367	prpf6	99	93.411	Danio_rerio
ENSSHAG00000016810	PRPF6	100	97.875	ENSDNOG00000040544	PRPF6	100	97.875	Dasypus_novemcinctus
ENSSHAG00000016810	PRPF6	91	97.780	ENSDORG00000005406	Prpf6	100	97.780	Dipodomys_ordii
ENSSHAG00000016810	PRPF6	99	71.902	FBgn0036828	CG6841	98	72.329	Drosophila_melanogaster
ENSSHAG00000016810	PRPF6	85	95.760	ENSETEG00000004447	PRPF6	85	95.760	Echinops_telfairi
ENSSHAG00000016810	PRPF6	99	87.699	ENSEBUG00000008835	prpf6	99	87.699	Eptatretus_burgeri
ENSSHAG00000016810	PRPF6	100	98.406	ENSEASG00005023115	PRPF6	100	98.406	Equus_asinus_asinus
ENSSHAG00000016810	PRPF6	100	94.155	ENSECAG00000013983	PRPF6	100	94.155	Equus_caballus
ENSSHAG00000016810	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSSHAG00000016810	PRPF6	100	91.923	ENSELUG00000001945	prpf6	93	91.923	Esox_lucius
ENSSHAG00000016810	PRPF6	100	98.618	ENSFCAG00000001183	PRPF6	100	98.618	Felis_catus
ENSSHAG00000016810	PRPF6	100	91.180	ENSFALG00000006046	-	97	91.180	Ficedula_albicollis
ENSSHAG00000016810	PRPF6	100	98.831	ENSFALG00000010326	-	97	98.831	Ficedula_albicollis
ENSSHAG00000016810	PRPF6	100	97.237	ENSFDAG00000006451	PRPF6	100	98.639	Fukomys_damarensis
ENSSHAG00000016810	PRPF6	100	93.730	ENSFHEG00000000560	prpf6	96	93.730	Fundulus_heteroclitus
ENSSHAG00000016810	PRPF6	100	89.641	ENSGMOG00000015622	prpf6	99	89.641	Gadus_morhua
ENSSHAG00000016810	PRPF6	100	98.512	ENSGALG00000006001	PRPF6	100	98.512	Gallus_gallus
ENSSHAG00000016810	PRPF6	100	88.417	ENSGAFG00000021109	prpf6	96	88.842	Gambusia_affinis
ENSSHAG00000016810	PRPF6	100	91.711	ENSGACG00000002576	prpf6	99	91.711	Gasterosteus_aculeatus
ENSSHAG00000016810	PRPF6	100	99.150	ENSGAGG00000008653	PRPF6	96	99.150	Gopherus_agassizii
ENSSHAG00000016810	PRPF6	100	97.768	ENSGGOG00000016876	PRPF6	100	97.768	Gorilla_gorilla
ENSSHAG00000016810	PRPF6	100	92.774	ENSHBUG00000004496	prpf6	96	93.199	Haplochromis_burtoni
ENSSHAG00000016810	PRPF6	100	98.618	ENSHGLG00000009222	PRPF6	100	98.618	Heterocephalus_glaber_female
ENSSHAG00000016810	PRPF6	97	98.582	ENSHGLG00100016600	PRPF6	100	98.582	Heterocephalus_glaber_male
ENSSHAG00000016810	PRPF6	100	91.605	ENSHCOG00000011513	prpf6	96	92.030	Hippocampus_comes
ENSSHAG00000016810	PRPF6	100	93.836	ENSIPUG00000004912	prpf6	96	93.836	Ictalurus_punctatus
ENSSHAG00000016810	PRPF6	100	95.860	ENSSTOG00000002922	PRPF6	100	95.860	Ictidomys_tridecemlineatus
ENSSHAG00000016810	PRPF6	100	98.725	ENSJJAG00000000836	Prpf6	100	98.725	Jaculus_jaculus
ENSSHAG00000016810	PRPF6	100	92.774	ENSKMAG00000017800	prpf6	96	93.199	Kryptolebias_marmoratus
ENSSHAG00000016810	PRPF6	100	92.242	ENSLBEG00000012582	prpf6	96	92.242	Labrus_bergylta
ENSSHAG00000016810	PRPF6	100	95.112	ENSLOCG00000004827	prpf6	96	94.155	Lepisosteus_oculatus
ENSSHAG00000016810	PRPF6	100	97.768	ENSLAFG00000005272	PRPF6	100	97.768	Loxodonta_africana
ENSSHAG00000016810	PRPF6	100	97.662	ENSMFAG00000037542	PRPF6	100	97.662	Macaca_fascicularis
ENSSHAG00000016810	PRPF6	100	91.083	ENSMMUG00000015558	PRPF6	98	99.480	Macaca_mulatta
ENSSHAG00000016810	PRPF6	100	83.263	ENSMNEG00000045555	PRPF6	100	83.263	Macaca_nemestrina
ENSSHAG00000016810	PRPF6	100	92.880	ENSMAMG00000010718	prpf6	96	93.305	Mastacembelus_armatus
ENSSHAG00000016810	PRPF6	100	92.251	ENSMZEG00005015261	-	99	92.675	Maylandia_zebra
ENSSHAG00000016810	PRPF6	94	92.290	ENSMZEG00005026539	prpf6	100	92.744	Maylandia_zebra
ENSSHAG00000016810	PRPF6	97	98.691	ENSMGAG00000006634	PRPF6	100	98.691	Meleagris_gallopavo
ENSSHAG00000016810	PRPF6	100	98.512	ENSMAUG00000013969	Prpf6	100	98.512	Mesocricetus_auratus
ENSSHAG00000016810	PRPF6	87	97.567	ENSMICG00000017793	PRPF6	99	97.567	Microcebus_murinus
ENSSHAG00000016810	PRPF6	100	98.618	ENSMOCG00000001701	Prpf6	100	98.618	Microtus_ochrogaster
ENSSHAG00000016810	PRPF6	100	92.030	ENSMMOG00000020419	prpf6	100	92.455	Mola_mola
ENSSHAG00000016810	PRPF6	97	99.753	ENSMODG00000017051	PRPF6	99	99.753	Monodelphis_domestica
ENSSHAG00000016810	PRPF6	99	93.018	ENSMALG00000000089	prpf6	100	93.018	Monopterus_albus
ENSSHAG00000016810	PRPF6	100	91.923	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSSHAG00000016810	PRPF6	100	98.512	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSSHAG00000016810	PRPF6	100	98.512	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSSHAG00000016810	PRPF6	100	98.512	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSSHAG00000016810	PRPF6	91	98.447	ENSMPUG00000008673	PRPF6	99	98.447	Mustela_putorius_furo
ENSSHAG00000016810	PRPF6	100	98.725	ENSNGAG00000003365	Prpf6	100	98.725	Nannospalax_galili
ENSSHAG00000016810	PRPF6	100	92.880	ENSNBRG00000015025	prpf6	96	93.305	Neolamprologus_brichardi
ENSSHAG00000016810	PRPF6	100	97.662	ENSNLEG00000010208	PRPF6	100	97.662	Nomascus_leucogenys
ENSSHAG00000016810	PRPF6	100	91.304	ENSMEUG00000009824	-	90	91.304	Notamacropus_eugenii
ENSSHAG00000016810	PRPF6	100	92.667	ENSODEG00000004841	PRPF6	100	92.667	Octodon_degus
ENSSHAG00000016810	PRPF6	100	92.774	ENSONIG00000017406	prpf6	96	93.199	Oreochromis_niloticus
ENSSHAG00000016810	PRPF6	100	99.469	ENSOANG00000004920	PRPF6	100	99.469	Ornithorhynchus_anatinus
ENSSHAG00000016810	PRPF6	99	96.781	ENSOCUG00000014151	PRPF6	100	96.781	Oryctolagus_cuniculus
ENSSHAG00000016810	PRPF6	100	92.880	ENSORLG00000009592	prpf6	96	92.880	Oryzias_latipes
ENSSHAG00000016810	PRPF6	100	92.986	ENSORLG00020001458	prpf6	96	92.986	Oryzias_latipes_hni
ENSSHAG00000016810	PRPF6	100	92.986	ENSORLG00015018762	prpf6	96	92.986	Oryzias_latipes_hsok
ENSSHAG00000016810	PRPF6	100	92.561	ENSOMEG00000012174	prpf6	96	92.986	Oryzias_melastigma
ENSSHAG00000016810	PRPF6	100	90.764	ENSOGAG00000007573	PRPF6	100	90.764	Otolemur_garnettii
ENSSHAG00000016810	PRPF6	100	97.875	ENSOARG00000008776	PRPF6	99	97.875	Ovis_aries
ENSSHAG00000016810	PRPF6	100	97.768	ENSPPAG00000008686	PRPF6	100	97.768	Pan_paniscus
ENSSHAG00000016810	PRPF6	100	98.512	ENSPPRG00000008497	PRPF6	100	98.512	Panthera_pardus
ENSSHAG00000016810	PRPF6	97	98.473	ENSPTIG00000011184	PRPF6	97	98.473	Panthera_tigris_altaica
ENSSHAG00000016810	PRPF6	100	97.768	ENSPTRG00000013765	PRPF6	100	97.768	Pan_troglodytes
ENSSHAG00000016810	PRPF6	100	97.343	ENSPANG00000024135	PRPF6	100	97.343	Papio_anubis
ENSSHAG00000016810	PRPF6	100	94.368	ENSPKIG00000005627	prpf6	99	94.793	Paramormyrops_kingsleyae
ENSSHAG00000016810	PRPF6	94	99.433	ENSPSIG00000007717	PRPF6	100	99.433	Pelodiscus_sinensis
ENSSHAG00000016810	PRPF6	100	90.552	ENSPMGG00000008925	prpf6	96	90.764	Periophthalmus_magnuspinnatus
ENSSHAG00000016810	PRPF6	100	98.406	ENSPEMG00000016036	Prpf6	100	98.406	Peromyscus_maniculatus_bairdii
ENSSHAG00000016810	PRPF6	99	88.523	ENSPMAG00000006144	prpf6	99	88.523	Petromyzon_marinus
ENSSHAG00000016810	PRPF6	100	100.000	ENSPCIG00000017909	PRPF6	100	100.000	Phascolarctos_cinereus
ENSSHAG00000016810	PRPF6	100	93.199	ENSPFOG00000006431	prpf6	96	93.624	Poecilia_formosa
ENSSHAG00000016810	PRPF6	100	93.092	ENSPLAG00000005974	prpf6	96	93.518	Poecilia_latipinna
ENSSHAG00000016810	PRPF6	100	93.305	ENSPMEG00000009977	prpf6	96	93.730	Poecilia_mexicana
ENSSHAG00000016810	PRPF6	100	93.199	ENSPREG00000017993	prpf6	92	93.624	Poecilia_reticulata
ENSSHAG00000016810	PRPF6	100	97.237	ENSPPYG00000011256	PRPF6	100	97.237	Pongo_abelii
ENSSHAG00000016810	PRPF6	94	99.837	ENSPCAG00000006536	PRPF6	88	99.837	Procavia_capensis
ENSSHAG00000016810	PRPF6	100	97.662	ENSPCOG00000016881	PRPF6	100	97.662	Propithecus_coquereli
ENSSHAG00000016810	PRPF6	100	91.923	ENSPVAG00000014316	PRPF6	100	91.923	Pteropus_vampyrus
ENSSHAG00000016810	PRPF6	100	76.327	ENSPNYG00000001939	prpf6	96	81.615	Pundamilia_nyererei
ENSSHAG00000016810	PRPF6	100	93.624	ENSPNAG00000015606	prpf6	96	94.049	Pygocentrus_nattereri
ENSSHAG00000016810	PRPF6	100	98.406	ENSRNOG00000051498	Prpf6	100	98.406	Rattus_norvegicus
ENSSHAG00000016810	PRPF6	100	97.662	ENSRBIG00000043613	PRPF6	100	97.662	Rhinopithecus_bieti
ENSSHAG00000016810	PRPF6	100	94.392	ENSRROG00000040969	PRPF6	98	98.097	Rhinopithecus_roxellana
ENSSHAG00000016810	PRPF6	91	93.599	ENSSBOG00000020632	PRPF6	93	93.599	Saimiri_boliviensis_boliviensis
ENSSHAG00000016810	PRPF6	99	94.844	ENSSFOG00015020859	prpf6	100	95.274	Scleropages_formosus
ENSSHAG00000016810	PRPF6	100	92.030	ENSSMAG00000008112	prpf6	96	92.030	Scophthalmus_maximus
ENSSHAG00000016810	PRPF6	100	92.774	ENSSDUG00000016142	prpf6	96	93.199	Seriola_dumerili
ENSSHAG00000016810	PRPF6	100	92.774	ENSSLDG00000025283	prpf6	100	89.692	Seriola_lalandi_dorsalis
ENSSHAG00000016810	PRPF6	94	97.506	ENSSPUG00000018260	PRPF6	100	97.506	Sphenodon_punctatus
ENSSHAG00000016810	PRPF6	100	92.774	ENSSPAG00000015850	prpf6	96	93.199	Stegastes_partitus
ENSSHAG00000016810	PRPF6	100	97.981	ENSSSCG00000029119	PRPF6	100	97.846	Sus_scrofa
ENSSHAG00000016810	PRPF6	100	98.937	ENSTGUG00000007221	PRPF6	99	98.937	Taeniopygia_guttata
ENSSHAG00000016810	PRPF6	100	91.923	ENSTRUG00000002920	prpf6	96	92.349	Takifugu_rubripes
ENSSHAG00000016810	PRPF6	100	85.624	ENSTNIG00000017873	prpf6	100	86.047	Tetraodon_nigroviridis
ENSSHAG00000016810	PRPF6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSSHAG00000016810	PRPF6	100	97.875	ENSTTRG00000013068	PRPF6	100	97.875	Tursiops_truncatus
ENSSHAG00000016810	PRPF6	98	96.957	ENSUMAG00000021631	PRPF6	98	96.957	Ursus_maritimus
ENSSHAG00000016810	PRPF6	100	98.512	ENSVVUG00000014948	PRPF6	100	98.512	Vulpes_vulpes
ENSSHAG00000016810	PRPF6	100	96.281	ENSXETG00000012054	prpf6	97	96.281	Xenopus_tropicalis
ENSSHAG00000016810	PRPF6	100	93.305	ENSXCOG00000008082	prpf6	96	93.730	Xiphophorus_couchianus
ENSSHAG00000016810	PRPF6	100	93.305	ENSXMAG00000015581	prpf6	96	93.730	Xiphophorus_maculatus