EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000016933 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 1912 bases
Position: chrGL867607.1:2416059-2417970
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000019957	KH_1	PF00013.29	1.1e-09	1	1
ENSSHAP00000019957	ResIII	PF04851.15	9.9e-06	1	1
ENSSHAP00000019957	DEAD	PF00270.29	1.5e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000020114	-	1734	-	ENSSHAP00000019957	578 (aa)	-	G3WX02

Gene Model

Click here to download ENSSHAG00000016933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000016933	-	61	32.773	ENSSHAG00000011424	DDX6	72	32.773
ENSSHAG00000016933	-	57	30.747	ENSSHAG00000002011	DDX25	76	30.366
ENSSHAG00000016933	-	67	34.867	ENSSHAG00000010825	DDX47	75	34.867
ENSSHAG00000016933	-	76	41.986	ENSSHAG00000012772	DDX5	67	41.113
ENSSHAG00000016933	-	65	32.564	ENSSHAG00000018781	DDX18	59	32.564
ENSSHAG00000016933	-	70	31.308	ENSSHAG00000013962	DDX52	72	31.681
ENSSHAG00000016933	-	72	37.617	ENSSHAG00000011574	-	67	37.237
ENSSHAG00000016933	-	98	74.390	ENSSHAG00000001847	-	89	74.390
ENSSHAG00000016933	-	67	39.547	ENSSHAG00000009132	DDX4	55	39.547
ENSSHAG00000016933	-	60	35.556	ENSSHAG00000005690	DDX50	56	33.174
ENSSHAG00000016933	-	60	30.959	ENSSHAG00000015820	DDX55	67	30.570
ENSSHAG00000016933	-	70	35.422	ENSSHAG00000014781	DDX59	65	35.422
ENSSHAG00000016933	-	62	35.326	ENSSHAG00000010982	DDX49	70	35.326
ENSSHAG00000016933	-	61	36.712	ENSSHAG00000005334	-	52	34.606
ENSSHAG00000016933	-	64	31.536	ENSSHAG00000005751	-	95	30.693
ENSSHAG00000016933	-	71	36.879	ENSSHAG00000014005	-	66	36.879
ENSSHAG00000016933	-	63	31.868	ENSSHAG00000004638	-	80	31.868
ENSSHAG00000016933	-	59	33.043	ENSSHAG00000008417	-	98	33.043
ENSSHAG00000016933	-	58	31.953	ENSSHAG00000017081	EIF4A2	98	31.953
ENSSHAG00000016933	-	65	40.609	ENSSHAG00000007623	-	58	40.609
ENSSHAG00000016933	-	66	41.827	ENSSHAG00000006590	DDX23	50	42.067
ENSSHAG00000016933	-	75	44.072	ENSSHAG00000004578	DDX17	68	44.072

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016933	-	80	64.482	ENSAPOG00000001712	ddx43	66	64.482	Acanthochromis_polyacanthus
ENSSHAG00000016933	-	80	58.495	ENSACIG00000012170	ddx43	73	58.495	Amphilophus_citrinellus
ENSSHAG00000016933	-	97	58.042	ENSAOCG00000001331	ddx43	80	58.042	Amphiprion_ocellaris
ENSSHAG00000016933	-	97	58.304	ENSAPEG00000001133	ddx43	79	58.304	Amphiprion_percula
ENSSHAG00000016933	-	97	58.304	ENSATEG00000012664	ddx43	82	58.304	Anabas_testudineus
ENSSHAG00000016933	-	96	64.107	ENSAPLG00000010182	-	98	69.787	Anas_platyrhynchos
ENSSHAG00000016933	-	98	62.892	ENSACAG00000004387	-	88	62.892	Anolis_carolinensis
ENSSHAG00000016933	-	97	57.766	ENSACLG00000026081	ddx43	83	57.766	Astatotilapia_calliptera
ENSSHAG00000016933	-	97	59.612	ENSAMXG00000004457	ddx43	81	56.641	Astyanax_mexicanus
ENSSHAG00000016933	-	78	44.589	WBGene00013214	Y54G11A.3	91	44.589	Caenorhabditis_elegans
ENSSHAG00000016933	-	52	49.020	ENSCSEG00000000532	ddx43	77	49.020	Cynoglossus_semilaevis
ENSSHAG00000016933	-	90	50.568	ENSCVAG00000009980	ddx43	80	50.568	Cyprinodon_variegatus
ENSSHAG00000016933	-	96	58.761	ENSDARG00000022614	ddx43	79	59.115	Danio_rerio
ENSSHAG00000016933	-	97	45.299	FBgn0037549	CG7878	83	45.299	Drosophila_melanogaster
ENSSHAG00000016933	-	87	48.119	ENSETEG00000014626	-	98	47.885	Echinops_telfairi
ENSSHAG00000016933	-	70	47.773	ENSETEG00000019547	-	69	47.328	Echinops_telfairi
ENSSHAG00000016933	-	97	58.053	ENSELUG00000012126	ddx43	85	58.053	Esox_lucius
ENSSHAG00000016933	-	98	65.194	ENSFALG00000007042	-	85	65.194	Ficedula_albicollis
ENSSHAG00000016933	-	80	64.655	ENSFHEG00000011226	ddx43	84	64.655	Fundulus_heteroclitus
ENSSHAG00000016933	-	76	60.633	ENSGMOG00000004178	ddx43	96	60.633	Gadus_morhua
ENSSHAG00000016933	-	75	71.759	ENSGALG00000015928	-	99	71.759	Gallus_gallus
ENSSHAG00000016933	-	98	56.048	ENSGAFG00000012622	ddx43	83	56.048	Gambusia_affinis
ENSSHAG00000016933	-	96	56.786	ENSGACG00000012072	ddx43	98	56.174	Gasterosteus_aculeatus
ENSSHAG00000016933	-	98	61.796	ENSGAGG00000025230	-	82	61.796	Gopherus_agassizii
ENSSHAG00000016933	-	97	57.592	ENSHBUG00000011653	ddx43	83	57.592	Haplochromis_burtoni
ENSSHAG00000016933	-	94	56.810	ENSHCOG00000014704	ddx43	80	58.790	Hippocampus_comes
ENSSHAG00000016933	-	97	58.042	ENSIPUG00000023423	ddx43	83	58.481	Ictalurus_punctatus
ENSSHAG00000016933	-	97	58.348	ENSKMAG00000016167	ddx43	83	58.348	Kryptolebias_marmoratus
ENSSHAG00000016933	-	97	56.591	ENSLBEG00000007913	ddx43	82	57.168	Labrus_bergylta
ENSSHAG00000016933	-	82	63.655	ENSLACG00000000741	ddx43	100	63.655	Latimeria_chalumnae
ENSSHAG00000016933	-	96	61.319	ENSLOCG00000016170	ddx43	84	60.601	Lepisosteus_oculatus
ENSSHAG00000016933	-	98	54.861	ENSMAMG00000022128	ddx43	82	54.861	Mastacembelus_armatus
ENSSHAG00000016933	-	97	57.766	ENSMZEG00005027349	ddx43	83	57.766	Maylandia_zebra
ENSSHAG00000016933	-	98	65.079	ENSMGAG00000013832	-	98	65.079	Meleagris_gallopavo
ENSSHAG00000016933	-	97	57.829	ENSMMOG00000007346	ddx43	83	58.185	Mola_mola
ENSSHAG00000016933	-	98	73.721	ENSMODG00000014335	-	97	73.721	Monodelphis_domestica
ENSSHAG00000016933	-	98	75.747	ENSMODG00000018546	-	88	75.747	Monodelphis_domestica
ENSSHAG00000016933	-	97	57.712	ENSMALG00000020673	ddx43	82	57.712	Monopterus_albus
ENSSHAG00000016933	-	97	58.115	ENSNBRG00000010942	ddx43	83	58.115	Neolamprologus_brichardi
ENSSHAG00000016933	-	97	58.865	ENSONIG00000001195	ddx43	85	58.865	Oreochromis_niloticus
ENSSHAG00000016933	-	63	67.112	ENSOANG00000006467	-	100	65.455	Ornithorhynchus_anatinus
ENSSHAG00000016933	-	97	58.304	ENSORLG00000002267	ddx43	89	58.304	Oryzias_latipes
ENSSHAG00000016933	-	97	58.304	ENSORLG00020018592	ddx43	89	58.304	Oryzias_latipes_hni
ENSSHAG00000016933	-	97	58.131	ENSORLG00015004854	ddx43	88	58.131	Oryzias_latipes_hsok
ENSSHAG00000016933	-	97	57.093	ENSOMEG00000023418	ddx43	89	57.093	Oryzias_melastigma
ENSSHAG00000016933	-	97	59.643	ENSPKIG00000002941	ddx43	80	59.643	Paramormyrops_kingsleyae
ENSSHAG00000016933	-	93	64.154	ENSPSIG00000002202	-	87	64.154	Pelodiscus_sinensis
ENSSHAG00000016933	-	51	60.606	ENSPMAG00000006112	ddx43	100	66.379	Petromyzon_marinus
ENSSHAG00000016933	-	75	80.093	ENSPCIG00000017981	-	98	80.093	Phascolarctos_cinereus
ENSSHAG00000016933	-	99	72.105	ENSPCIG00000002492	-	92	72.105	Phascolarctos_cinereus
ENSSHAG00000016933	-	96	56.818	ENSPFOG00000004241	ddx43	82	56.818	Poecilia_formosa
ENSSHAG00000016933	-	96	56.894	ENSPLAG00000023362	ddx43	82	56.894	Poecilia_latipinna
ENSSHAG00000016933	-	96	56.818	ENSPMEG00000004870	ddx43	82	56.818	Poecilia_mexicana
ENSSHAG00000016933	-	96	51.318	ENSPREG00000000923	ddx43	81	51.318	Poecilia_reticulata
ENSSHAG00000016933	-	94	56.022	ENSPNYG00000009064	ddx43	80	56.022	Pundamilia_nyererei
ENSSHAG00000016933	-	97	59.469	ENSPNAG00000001232	ddx43	79	59.469	Pygocentrus_nattereri
ENSSHAG00000016933	-	96	56.786	ENSSFOG00015012193	ddx43	88	56.786	Scleropages_formosus
ENSSHAG00000016933	-	97	56.446	ENSSMAG00000019288	ddx43	79	56.446	Scophthalmus_maximus
ENSSHAG00000016933	-	97	57.692	ENSSDUG00000020120	ddx43	81	57.867	Seriola_dumerili
ENSSHAG00000016933	-	97	56.283	ENSSLDG00000017225	ddx43	79	56.560	Seriola_lalandi_dorsalis
ENSSHAG00000016933	-	84	58.907	ENSSPUG00000018097	-	99	58.907	Sphenodon_punctatus
ENSSHAG00000016933	-	97	58.025	ENSSPAG00000006858	ddx43	81	58.437	Stegastes_partitus
ENSSHAG00000016933	-	98	63.194	ENSTGUG00000012684	-	96	63.194	Taeniopygia_guttata
ENSSHAG00000016933	-	97	54.717	ENSTRUG00000012795	ddx43	85	54.717	Takifugu_rubripes
ENSSHAG00000016933	-	96	57.746	ENSTNIG00000009822	ddx43	97	57.923	Tetraodon_nigroviridis
ENSSHAG00000016933	-	98	62.367	ENSXETG00000011767	ddx43	84	62.367	Xenopus_tropicalis
ENSSHAG00000016933	-	93	56.545	ENSXCOG00000013810	ddx43	76	59.722	Xiphophorus_couchianus
ENSSHAG00000016933	-	97	55.862	ENSXMAG00000017126	ddx43	83	55.862	Xiphophorus_maculatus