EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000016951 (Gene tree)
Gene ID: 100919922
Gene Symbol: RNPS1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 9827 bases
Position: chrGL841555.1:2424497-2434323
Accession: 100919922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000019979	RRM_1	PF00076.22	5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000020137	RNPS1-201	2241	-	ENSSHAP00000019979	305 (aa)	XP_003762069	G3WX24

Gene Model

Click here to download ENSSHAG00000016951's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG
shr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016951's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016951	RNPS1	100	98.033	ENSG00000205937	RNPS1	100	100.000	Homo_sapiens
ENSSHAG00000016951	RNPS1	78	69.874	ENSAPOG00000014649	-	84	70.833	Acanthochromis_polyacanthus
ENSSHAG00000016951	RNPS1	100	98.033	ENSAMEG00000017861	RNPS1	100	98.033	Ailuropoda_melanoleuca
ENSSHAG00000016951	RNPS1	70	64.651	ENSACIG00000014367	-	76	66.359	Amphilophus_citrinellus
ENSSHAG00000016951	RNPS1	78	71.548	ENSATEG00000024267	RNPS1	84	72.083	Anabas_testudineus
ENSSHAG00000016951	RNPS1	86	64.639	ENSAPLG00000006231	RNPS1	65	93.548	Anas_platyrhynchos
ENSSHAG00000016951	RNPS1	76	89.270	ENSACAG00000004088	RNPS1	94	89.270	Anolis_carolinensis
ENSSHAG00000016951	RNPS1	79	90.083	ENSANAG00000029802	-	90	90.795	Aotus_nancymaae
ENSSHAG00000016951	RNPS1	100	97.705	ENSANAG00000028802	RNPS1	100	97.705	Aotus_nancymaae
ENSSHAG00000016951	RNPS1	86	61.597	ENSACLG00000021537	-	96	68.679	Astatotilapia_calliptera
ENSSHAG00000016951	RNPS1	79	75.000	ENSAMXG00000006330	-	84	68.201	Astyanax_mexicanus
ENSSHAG00000016951	RNPS1	100	97.377	ENSBTAG00000009969	RNPS1	100	97.377	Bos_taurus
ENSSHAG00000016951	RNPS1	100	98.033	ENSCJAG00000014969	RNPS1	100	98.033	Callithrix_jacchus
ENSSHAG00000016951	RNPS1	100	98.033	ENSCAFG00000019397	RNPS1	100	98.033	Canis_familiaris
ENSSHAG00000016951	RNPS1	100	98.033	ENSCAFG00020026159	RNPS1	100	98.033	Canis_lupus_dingo
ENSSHAG00000016951	RNPS1	67	97.044	ENSCHIG00000014621	-	69	96.569	Capra_hircus
ENSSHAG00000016951	RNPS1	79	92.975	ENSTSYG00000031848	-	98	92.917	Carlito_syrichta
ENSSHAG00000016951	RNPS1	100	98.033	ENSTSYG00000001629	RNPS1	100	98.033	Carlito_syrichta
ENSSHAG00000016951	RNPS1	100	97.705	ENSCAPG00000007731	RNPS1	100	97.705	Cavia_aperea
ENSSHAG00000016951	RNPS1	100	97.705	ENSCPOG00000002066	RNPS1	100	97.705	Cavia_porcellus
ENSSHAG00000016951	RNPS1	100	97.705	ENSCCAG00000034480	RNPS1	100	97.705	Cebus_capucinus
ENSSHAG00000016951	RNPS1	95	88.316	ENSCATG00000042361	-	87	91.985	Cercocebus_atys
ENSSHAG00000016951	RNPS1	100	98.033	ENSCATG00000013756	RNPS1	100	98.033	Cercocebus_atys
ENSSHAG00000016951	RNPS1	100	97.705	ENSCLAG00000015546	RNPS1	100	97.705	Chinchilla_lanigera
ENSSHAG00000016951	RNPS1	89	95.588	ENSCSAG00000005219	-	80	96.653	Chlorocebus_sabaeus
ENSSHAG00000016951	RNPS1	100	96.393	ENSCHOG00000004866	RNPS1	100	96.393	Choloepus_hoffmanni
ENSSHAG00000016951	RNPS1	100	98.033	ENSCANG00000041307	RNPS1	100	98.033	Colobus_angolensis_palliatus
ENSSHAG00000016951	RNPS1	67	83.575	ENSCANG00000030189	-	78	69.565	Colobus_angolensis_palliatus
ENSSHAG00000016951	RNPS1	100	98.033	ENSCGRG00001020431	Rnps1	100	98.033	Cricetulus_griseus_chok1gshd
ENSSHAG00000016951	RNPS1	79	97.521	ENSCGRG00000014021	Rnps1	80	97.521	Cricetulus_griseus_crigri
ENSSHAG00000016951	RNPS1	85	69.466	ENSCSEG00000000402	RNPS1	85	69.466	Cynoglossus_semilaevis
ENSSHAG00000016951	RNPS1	78	63.598	ENSDARG00000100188	RNPS1	84	69.583	Danio_rerio
ENSSHAG00000016951	RNPS1	78	63.598	ENSDARG00000116743	rnps1	84	69.583	Danio_rerio
ENSSHAG00000016951	RNPS1	100	98.033	ENSDNOG00000016081	RNPS1	100	98.033	Dasypus_novemcinctus
ENSSHAG00000016951	RNPS1	65	70.352	ENSDNOG00000038751	-	100	69.652	Dasypus_novemcinctus
ENSSHAG00000016951	RNPS1	100	98.033	ENSDORG00000001755	Rnps1	100	98.033	Dipodomys_ordii
ENSSHAG00000016951	RNPS1	100	98.033	ENSEASG00005004862	RNPS1	100	98.033	Equus_asinus_asinus
ENSSHAG00000016951	RNPS1	81	91.129	ENSECAG00000023288	RNPS1	83	95.671	Equus_caballus
ENSSHAG00000016951	RNPS1	100	80.656	ENSEEUG00000005933	RNPS1	100	80.656	Erinaceus_europaeus
ENSSHAG00000016951	RNPS1	100	97.705	ENSFCAG00000007690	RNPS1	100	97.705	Felis_catus
ENSSHAG00000016951	RNPS1	79	93.333	ENSFALG00000004868	RNPS1	85	93.333	Ficedula_albicollis
ENSSHAG00000016951	RNPS1	100	97.377	ENSFDAG00000003386	RNPS1	100	97.377	Fukomys_damarensis
ENSSHAG00000016951	RNPS1	70	70.233	ENSFHEG00000011705	RNPS1	75	70.833	Fundulus_heteroclitus
ENSSHAG00000016951	RNPS1	78	93.305	ENSGALG00000009288	RNPS1	84	93.305	Gallus_gallus
ENSSHAG00000016951	RNPS1	86	93.156	ENSGAGG00000010452	RNPS1	86	93.156	Gopherus_agassizii
ENSSHAG00000016951	RNPS1	68	95.631	ENSGGOG00000026421	-	79	95.631	Gorilla_gorilla
ENSSHAG00000016951	RNPS1	100	98.033	ENSGGOG00000014275	RNPS1	100	98.033	Gorilla_gorilla
ENSSHAG00000016951	RNPS1	79	65.145	ENSHBUG00000017337	-	84	72.614	Haplochromis_burtoni
ENSSHAG00000016951	RNPS1	79	93.117	ENSHGLG00000006292	-	94	95.000	Heterocephalus_glaber_female
ENSSHAG00000016951	RNPS1	100	98.033	ENSHGLG00000013957	RNPS1	100	98.033	Heterocephalus_glaber_female
ENSSHAG00000016951	RNPS1	67	90.196	ENSHGLG00100011610	-	83	90.196	Heterocephalus_glaber_male
ENSSHAG00000016951	RNPS1	85	92.278	ENSHGLG00100015267	-	79	93.213	Heterocephalus_glaber_male
ENSSHAG00000016951	RNPS1	100	98.033	ENSHGLG00100003539	RNPS1	100	98.033	Heterocephalus_glaber_male
ENSSHAG00000016951	RNPS1	80	80.816	ENSHGLG00100017879	-	80	69.008	Heterocephalus_glaber_male
ENSSHAG00000016951	RNPS1	100	86.230	ENSSTOG00000013200	RNPS1	100	86.230	Ictidomys_tridecemlineatus
ENSSHAG00000016951	RNPS1	100	98.361	ENSJJAG00000015576	-	100	98.361	Jaculus_jaculus
ENSSHAG00000016951	RNPS1	86	80.608	ENSJJAG00000019234	-	75	77.947	Jaculus_jaculus
ENSSHAG00000016951	RNPS1	78	87.448	ENSLACG00000007112	RNPS1	84	87.448	Latimeria_chalumnae
ENSSHAG00000016951	RNPS1	78	67.364	ENSLOCG00000001758	RNPS1	84	83.682	Lepisosteus_oculatus
ENSSHAG00000016951	RNPS1	100	98.033	ENSMFAG00000042142	RNPS1	100	98.033	Macaca_fascicularis
ENSSHAG00000016951	RNPS1	88	92.537	ENSMMUG00000041726	-	92	92.395	Macaca_mulatta
ENSSHAG00000016951	RNPS1	66	97.525	ENSMMUG00000019238	-	80	100.000	Macaca_mulatta
ENSSHAG00000016951	RNPS1	88	92.910	ENSMNEG00000024827	-	92	92.776	Macaca_nemestrina
ENSSHAG00000016951	RNPS1	100	98.033	ENSMLEG00000036928	RNPS1	100	98.033	Mandrillus_leucophaeus
ENSSHAG00000016951	RNPS1	68	91.262	ENSMLEG00000040232	-	80	91.262	Mandrillus_leucophaeus
ENSSHAG00000016951	RNPS1	78	69.456	ENSMAMG00000021609	-	84	70.000	Mastacembelus_armatus
ENSSHAG00000016951	RNPS1	80	75.000	ENSMAMG00000021148	-	88	68.582	Mastacembelus_armatus
ENSSHAG00000016951	RNPS1	78	65.000	ENSMZEG00005006256	-	84	72.500	Maylandia_zebra
ENSSHAG00000016951	RNPS1	79	91.701	ENSMGAG00000010042	RNPS1	98	92.797	Meleagris_gallopavo
ENSSHAG00000016951	RNPS1	100	97.377	ENSMICG00000031543	RNPS1	100	97.377	Microcebus_murinus
ENSSHAG00000016951	RNPS1	100	98.033	ENSMOCG00000003429	Rnps1	100	98.033	Microtus_ochrogaster
ENSSHAG00000016951	RNPS1	70	67.442	ENSMMOG00000010863	RNPS1	75	66.047	Mola_mola
ENSSHAG00000016951	RNPS1	100	98.693	ENSMODG00000015891	RNPS1	100	98.693	Monodelphis_domestica
ENSSHAG00000016951	RNPS1	100	98.033	ENSMUSG00000034681	Rnps1	100	98.033	Mus_musculus
ENSSHAG00000016951	RNPS1	100	97.377	MGP_PahariEiJ_G0023498	Rnps1	100	97.377	Mus_pahari
ENSSHAG00000016951	RNPS1	100	98.033	MGP_SPRETEiJ_G0022092	Rnps1	100	98.033	Mus_spretus
ENSSHAG00000016951	RNPS1	100	98.033	ENSMLUG00000016808	RNPS1	100	98.033	Myotis_lucifugus
ENSSHAG00000016951	RNPS1	100	97.705	ENSNGAG00000023702	Rnps1	100	97.705	Nannospalax_galili
ENSSHAG00000016951	RNPS1	70	67.907	ENSNBRG00000023437	RNPS1	75	66.512	Neolamprologus_brichardi
ENSSHAG00000016951	RNPS1	81	63.968	ENSNBRG00000014540	-	92	69.141	Neolamprologus_brichardi
ENSSHAG00000016951	RNPS1	89	95.956	ENSNLEG00000009243	RNPS1	88	97.083	Nomascus_leucogenys
ENSSHAG00000016951	RNPS1	100	98.689	ENSMEUG00000008882	RNPS1	100	98.689	Notamacropus_eugenii
ENSSHAG00000016951	RNPS1	79	94.167	ENSOPRG00000016422	RNPS1	79	94.167	Ochotona_princeps
ENSSHAG00000016951	RNPS1	54	64.634	ENSODEG00000002513	-	79	64.516	Octodon_degus
ENSSHAG00000016951	RNPS1	52	66.250	ENSODEG00000017258	-	77	64.516	Octodon_degus
ENSSHAG00000016951	RNPS1	79	70.954	ENSORLG00015011183	RNPS1	74	71.784	Oryzias_latipes_hsok
ENSSHAG00000016951	RNPS1	95	97.241	ENSOARG00000018056	-	81	97.241	Ovis_aries
ENSSHAG00000016951	RNPS1	75	96.491	ENSPPAG00000037836	-	96	96.491	Pan_paniscus
ENSSHAG00000016951	RNPS1	89	92.593	ENSPPAG00000011845	RNPS1	90	91.632	Pan_paniscus
ENSSHAG00000016951	RNPS1	100	97.705	ENSPPRG00000011255	RNPS1	100	97.705	Panthera_pardus
ENSSHAG00000016951	RNPS1	63	92.500	ENSPTIG00000015643	RNPS1	85	100.000	Panthera_tigris_altaica
ENSSHAG00000016951	RNPS1	74	95.595	ENSPTRG00000046326	-	91	91.213	Pan_troglodytes
ENSSHAG00000016951	RNPS1	100	97.705	ENSPTRG00000031310	RNPS1	100	97.705	Pan_troglodytes
ENSSHAG00000016951	RNPS1	100	98.033	ENSPANG00000015748	RNPS1	100	98.033	Papio_anubis
ENSSHAG00000016951	RNPS1	67	71.569	ENSPANG00000033576	-	75	72.139	Papio_anubis
ENSSHAG00000016951	RNPS1	78	79.167	ENSPKIG00000023465	RNPS1	84	79.167	Paramormyrops_kingsleyae
ENSSHAG00000016951	RNPS1	86	92.776	ENSPSIG00000006048	RNPS1	86	92.776	Pelodiscus_sinensis
ENSSHAG00000016951	RNPS1	100	98.033	ENSPEMG00000012797	Rnps1	100	98.033	Peromyscus_maniculatus_bairdii
ENSSHAG00000016951	RNPS1	61	88.742	ENSPCIG00000016114	-	80	98.387	Phascolarctos_cinereus
ENSSHAG00000016951	RNPS1	100	100.000	ENSPCIG00000025012	RNPS1	100	100.000	Phascolarctos_cinereus
ENSSHAG00000016951	RNPS1	86	95.057	ENSPCAG00000004514	RNPS1	86	95.057	Procavia_capensis
ENSSHAG00000016951	RNPS1	100	97.705	ENSPCOG00000005478	RNPS1	100	97.705	Propithecus_coquereli
ENSSHAG00000016951	RNPS1	100	97.705	ENSPVAG00000005105	RNPS1	100	97.705	Pteropus_vampyrus
ENSSHAG00000016951	RNPS1	78	76.569	ENSPNAG00000025479	RNPS1	84	69.874	Pygocentrus_nattereri
ENSSHAG00000016951	RNPS1	100	97.705	ENSRNOG00000008703	Rnps1	100	97.705	Rattus_norvegicus
ENSSHAG00000016951	RNPS1	92	97.500	ENSRBIG00000038965	-	99	97.500	Rhinopithecus_bieti
ENSSHAG00000016951	RNPS1	89	97.794	ENSRROG00000041252	RNPS1	97	94.118	Rhinopithecus_roxellana
ENSSHAG00000016951	RNPS1	100	98.033	ENSSBOG00000027927	RNPS1	100	98.033	Saimiri_boliviensis_boliviensis
ENSSHAG00000016951	RNPS1	78	72.500	ENSSFOG00015022746	RNPS1	87	66.527	Scleropages_formosus
ENSSHAG00000016951	RNPS1	79	76.860	ENSSFOG00015019341	-	75	69.710	Scleropages_formosus
ENSSHAG00000016951	RNPS1	78	70.293	ENSSDUG00000011453	RNPS1	84	70.833	Seriola_dumerili
ENSSHAG00000016951	RNPS1	79	95.041	ENSSARG00000001577	RNPS1	86	95.041	Sorex_araneus
ENSSHAG00000016951	RNPS1	86	93.536	ENSSPUG00000016588	RNPS1	86	93.536	Sphenodon_punctatus
ENSSHAG00000016951	RNPS1	100	97.705	ENSSSCG00000008048	RNPS1	100	97.705	Sus_scrofa
ENSSHAG00000016951	RNPS1	79	92.917	ENSTGUG00000003237	RNPS1	85	92.917	Taeniopygia_guttata
ENSSHAG00000016951	RNPS1	78	71.667	ENSTRUG00000008602	RNPS1	84	71.667	Takifugu_rubripes
ENSSHAG00000016951	RNPS1	79	72.428	ENSTNIG00000009753	RNPS1	84	72.428	Tetraodon_nigroviridis
ENSSHAG00000016951	RNPS1	89	97.794	ENSTBEG00000009098	RNPS1	100	97.794	Tupaia_belangeri
ENSSHAG00000016951	RNPS1	100	98.033	ENSTTRG00000008220	RNPS1	100	98.033	Tursiops_truncatus
ENSSHAG00000016951	RNPS1	90	97.802	ENSUAMG00000004462	RNPS1	100	97.802	Ursus_americanus
ENSSHAG00000016951	RNPS1	100	98.033	ENSUMAG00000022327	RNPS1	100	98.033	Ursus_maritimus
ENSSHAG00000016951	RNPS1	100	98.033	ENSVVUG00000009244	RNPS1	100	98.033	Vulpes_vulpes
ENSSHAG00000016951	RNPS1	78	70.293	ENSXETG00000024439	rnps1	73	72.566	Xenopus_tropicalis