EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000016965 (Gene tree)
Gene ID: 100925508
Gene Symbol: GTF3A
Alias: AP2|TFIIIA
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 22260 bases
Position: chrGL849703.1:2429066-2451325
Accession: 100925508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000020001	zf-C2H2	PF00096.26	4.1e-36	1	6
ENSSHAP00000020001	zf-C2H2	PF00096.26	4.1e-36	2	6
ENSSHAP00000020001	zf-C2H2	PF00096.26	4.1e-36	3	6
ENSSHAP00000020001	zf-C2H2	PF00096.26	4.1e-36	4	6
ENSSHAP00000020001	zf-C2H2	PF00096.26	4.1e-36	5	6
ENSSHAP00000020001	zf-C2H2	PF00096.26	4.1e-36	6	6
ENSSHAP00000020001	zf-met	PF12874.7	5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000020159	GTF3A-201	1903	-	ENSSHAP00000020001	350 (aa)	XP_003764517	G3WX46

Gene Model

Click here to download ENSSHAG00000016965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000016965's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000016965	GTF3A	77	35.769	ENSSHAG00000014216	-	75	35.769
ENSSHAG00000016965	GTF3A	75	33.051	ENSSHAG00000018106	-	75	33.051
ENSSHAG00000016965	GTF3A	72	36.752	ENSSHAG00000004205	SNAI2	50	36.752
ENSSHAG00000016965	GTF3A	76	36.058	ENSSHAG00000011906	-	58	35.266
ENSSHAG00000016965	GTF3A	75	39.759	ENSSHAG00000008255	ZNF768	64	33.058
ENSSHAG00000016965	GTF3A	77	36.047	ENSSHAG00000011714	-	61	36.047
ENSSHAG00000016965	GTF3A	88	33.762	ENSSHAG00000001415	-	72	32.700
ENSSHAG00000016965	GTF3A	78	34.653	ENSSHAG00000003090	-	79	31.818
ENSSHAG00000016965	GTF3A	74	35.714	ENSSHAG00000003250	PRDM5	76	35.714
ENSSHAG00000016965	GTF3A	87	32.394	ENSSHAG00000011347	ZNF668	60	40.476
ENSSHAG00000016965	GTF3A	82	37.333	ENSSHAG00000005922	-	54	37.333
ENSSHAG00000016965	GTF3A	77	36.397	ENSSHAG00000003284	-	73	36.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000016965	GTF3A	99	76.204	ENSAMEG00000015824	GTF3A	91	78.485	Ailuropoda_melanoleuca
ENSSHAG00000016965	GTF3A	91	75.701	ENSBTAG00000012600	GTF3A	89	75.701	Bos_taurus
ENSSHAG00000016965	GTF3A	96	76.023	ENSCAFG00000006794	GTF3A	87	78.370	Canis_familiaris
ENSSHAG00000016965	GTF3A	93	73.414	ENSCHIG00000010341	-	89	74.766	Capra_hircus
ENSSHAG00000016965	GTF3A	93	73.716	ENSCHIG00000021040	-	76	75.078	Capra_hircus
ENSSHAG00000016965	GTF3A	95	75.000	ENSTSYG00000004206	GTF3A	98	75.988	Carlito_syrichta
ENSSHAG00000016965	GTF3A	85	82.375	ENSCAPG00000015862	GTF3A	100	77.567	Cavia_aperea
ENSSHAG00000016965	GTF3A	85	77.778	ENSCPOG00000010143	GTF3A	89	77.258	Cavia_porcellus
ENSSHAG00000016965	GTF3A	83	78.351	ENSCLAG00000003912	GTF3A	88	77.816	Chinchilla_lanigera
ENSSHAG00000016965	GTF3A	98	76.791	ENSDNOG00000037405	-	78	79.091	Dasypus_novemcinctus
ENSSHAG00000016965	GTF3A	99	72.222	ENSETEG00000003225	GTF3A	70	83.333	Echinops_telfairi
ENSSHAG00000016965	GTF3A	88	69.350	ENSEASG00005013216	-	81	72.696	Equus_asinus_asinus
ENSSHAG00000016965	GTF3A	99	69.811	ENSEASG00005022495	-	73	76.758	Equus_asinus_asinus
ENSSHAG00000016965	GTF3A	92	73.394	ENSECAG00000024825	-	75	73.394	Equus_caballus
ENSSHAG00000016965	GTF3A	93	76.431	ENSECAG00000014803	GTF3A	86	76.174	Equus_caballus
ENSSHAG00000016965	GTF3A	97	69.399	ENSEEUG00000004307	GTF3A	81	75.758	Erinaceus_europaeus
ENSSHAG00000016965	GTF3A	92	80.000	ENSFCAG00000006982	GTF3A	76	79.511	Felis_catus
ENSSHAG00000016965	GTF3A	78	81.752	ENSFDAG00000016841	GTF3A	85	81.159	Fukomys_damarensis
ENSSHAG00000016965	GTF3A	81	80.986	ENSHGLG00000004173	GTF3A	88	80.986	Heterocephalus_glaber_female
ENSSHAG00000016965	GTF3A	81	80.986	ENSHGLG00100011561	GTF3A	88	80.986	Heterocephalus_glaber_male
ENSSHAG00000016965	GTF3A	79	82.545	ENSSTOG00000013853	GTF3A	88	81.949	Ictidomys_tridecemlineatus
ENSSHAG00000016965	GTF3A	92	73.139	ENSJJAG00000011501	Gtf3a	99	73.139	Jaculus_jaculus
ENSSHAG00000016965	GTF3A	97	71.714	ENSLAFG00000027315	GTF3A	91	73.512	Loxodonta_africana
ENSSHAG00000016965	GTF3A	91	75.312	ENSMAUG00000016253	Gtf3a	89	73.089	Mesocricetus_auratus
ENSSHAG00000016965	GTF3A	92	76.758	ENSMICG00000014763	GTF3A	94	75.839	Microcebus_murinus
ENSSHAG00000016965	GTF3A	90	76.752	MGP_CAROLIEiJ_G0028031	Gtf3a	90	73.926	Mus_caroli
ENSSHAG00000016965	GTF3A	90	76.115	ENSMUSG00000016503	Gtf3a	90	73.394	Mus_musculus
ENSSHAG00000016965	GTF3A	90	76.508	MGP_PahariEiJ_G0024597	Gtf3a	89	74.154	Mus_pahari
ENSSHAG00000016965	GTF3A	97	70.930	MGP_SPRETEiJ_G0029029	Gtf3a	90	73.089	Mus_spretus
ENSSHAG00000016965	GTF3A	99	75.358	ENSMPUG00000005835	GTF3A	89	76.970	Mustela_putorius_furo
ENSSHAG00000016965	GTF3A	85	81.757	ENSMLUG00000002158	GTF3A	90	81.208	Myotis_lucifugus
ENSSHAG00000016965	GTF3A	100	76.554	ENSNLEG00000000331	GTF3A	90	79.573	Nomascus_leucogenys
ENSSHAG00000016965	GTF3A	93	77.676	ENSMEUG00000010089	GTF3A	96	77.676	Notamacropus_eugenii
ENSSHAG00000016965	GTF3A	99	63.760	ENSOPRG00000000854	-	80	69.565	Ochotona_princeps
ENSSHAG00000016965	GTF3A	92	76.687	ENSODEG00000006725	GTF3A	77	76.220	Octodon_degus
ENSSHAG00000016965	GTF3A	99	74.857	ENSOCUG00000011713	GTF3A	75	78.704	Oryctolagus_cuniculus
ENSSHAG00000016965	GTF3A	93	79.635	ENSOGAG00000014589	GTF3A	90	79.635	Otolemur_garnettii
ENSSHAG00000016965	GTF3A	93	68.580	ENSOARG00000012551	GTF3A	88	69.782	Ovis_aries
ENSSHAG00000016965	GTF3A	99	76.487	ENSPPRG00000002368	GTF3A	91	78.788	Panthera_pardus
ENSSHAG00000016965	GTF3A	93	78.523	ENSPTIG00000018958	GTF3A	82	78.523	Panthera_tigris_altaica
ENSSHAG00000016965	GTF3A	93	57.414	ENSPSIG00000011722	GTF3A	99	57.414	Pelodiscus_sinensis
ENSSHAG00000016965	GTF3A	99	75.354	ENSPPYG00000005235	GTF3A	91	79.205	Pongo_abelii
ENSSHAG00000016965	GTF3A	92	76.453	ENSPCOG00000016742	GTF3A	74	76.453	Propithecus_coquereli
ENSSHAG00000016965	GTF3A	93	73.860	ENSPVAG00000012837	GTF3A	78	73.860	Pteropus_vampyrus
ENSSHAG00000016965	GTF3A	100	68.644	ENSRROG00000043264	GTF3A	89	71.951	Rhinopithecus_roxellana
ENSSHAG00000016965	GTF3A	78	70.803	ENSSARG00000010692	GTF3A	75	70.803	Sorex_araneus
ENSSHAG00000016965	GTF3A	93	71.865	ENSSPUG00000005307	GTF3A	87	72.086	Sphenodon_punctatus
ENSSHAG00000016965	GTF3A	76	48.327	ENSTRUG00000005241	gtf3ab	84	47.260	Takifugu_rubripes
ENSSHAG00000016965	GTF3A	82	81.250	ENSTBEG00000012075	GTF3A	61	81.250	Tupaia_belangeri
ENSSHAG00000016965	GTF3A	93	70.393	ENSTTRG00000008538	GTF3A	79	70.948	Tursiops_truncatus
ENSSHAG00000016965	GTF3A	99	76.204	ENSUAMG00000019189	GTF3A	91	78.485	Ursus_americanus
ENSSHAG00000016965	GTF3A	95	77.679	ENSUMAG00000016941	GTF3A	99	77.946	Ursus_maritimus
ENSSHAG00000016965	GTF3A	92	77.703	ENSVPAG00000004995	GTF3A	99	77.703	Vicugna_pacos
ENSSHAG00000016965	GTF3A	99	75.424	ENSVVUG00000009197	GTF3A	91	77.644	Vulpes_vulpes