EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000017013 (Gene tree)
Gene ID: 100934048
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 6494 bases
Position: chrGL834717.1:2456694-2463187
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000020054	RNA_pol_Rpb2_1	PF04563.15	1.9e-33	1	1
ENSSHAP00000020054	RNA_pol_Rpb2_2	PF04561.14	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000020214	-	1059	-	ENSSHAP00000020054	353 (aa)	-	G3WX99

Gene Model

Click here to download ENSSHAG00000017013's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000017013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000017013	-	100	84.419	ENSG00000125630	POLR1B	72	81.522	Homo_sapiens
ENSSHAG00000017013	-	100	75.921	ENSACAG00000005660	POLR1B	60	75.921	Anolis_carolinensis
ENSSHAG00000017013	-	56	68.367	ENSEBUG00000011908	-	91	68.367	Eptatretus_burgeri
ENSSHAG00000017013	-	100	71.105	ENSTRUG00000006581	polr1b	50	71.105	Takifugu_rubripes