EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000017017 (Gene tree)
Gene ID: 100930455
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 34055 bases
Position: chrGL861653.1:2459917-2493971
Accession: 21863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000020059	RRM_1	PF00076.22	4e-47	1	3
ENSSHAP00000020059	RRM_1	PF00076.22	4e-47	2	3
ENSSHAP00000020059	RRM_1	PF00076.22	4e-47	3	3
ENSSHAP00000020058	RRM_1	PF00076.22	4.6e-47	1	3
ENSSHAP00000020058	RRM_1	PF00076.22	4.6e-47	2	3
ENSSHAP00000020058	RRM_1	PF00076.22	4.6e-47	3	3
ENSSHAP00000020060	RRM_1	PF00076.22	4.9e-47	1	3
ENSSHAP00000020060	RRM_1	PF00076.22	4.9e-47	2	3
ENSSHAP00000020060	RRM_1	PF00076.22	4.9e-47	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000020219	RBM28-202	2502	-	ENSSHAP00000020059	721 (aa)	-	G3WXA4
ENSSHAT00000020218	RBM28-201	2544	-	ENSSHAP00000020058	735 (aa)	-	G3WXA3
ENSSHAT00000020220	RBM28-203	2487	-	ENSSHAP00000020060	748 (aa)	-	G3WXA5

Gene Model

Click here to download ENSSHAG00000017017's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000017017's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000017017	RBM28	99	67.292	ENSG00000106344	RBM28	96	67.891	Homo_sapiens
ENSSHAG00000017017	RBM28	58	54.253	ENSAPOG00000015512	rbm28	96	50.201	Acanthochromis_polyacanthus
ENSSHAG00000017017	RBM28	96	68.817	ENSAMEG00000004776	RBM28	89	69.048	Ailuropoda_melanoleuca
ENSSHAG00000017017	RBM28	56	54.208	ENSACIG00000023153	rbm28	97	51.096	Amphilophus_citrinellus
ENSSHAG00000017017	RBM28	58	54.545	ENSAOCG00000000462	rbm28	96	50.134	Amphiprion_ocellaris
ENSSHAG00000017017	RBM28	58	54.545	ENSAPEG00000012996	rbm28	96	49.733	Amphiprion_percula
ENSSHAG00000017017	RBM28	59	50.542	ENSATEG00000001672	rbm28	96	46.925	Anabas_testudineus
ENSSHAG00000017017	RBM28	99	68.169	ENSANAG00000033922	RBM28	96	68.038	Aotus_nancymaae
ENSSHAG00000017017	RBM28	97	47.554	ENSACLG00000025024	rbm28	96	47.299	Astatotilapia_calliptera
ENSSHAG00000017017	RBM28	60	55.862	ENSAMXG00000000763	rbm28	99	57.175	Astyanax_mexicanus
ENSSHAG00000017017	RBM28	99	67.667	ENSBTAG00000017001	RBM28	96	68.767	Bos_taurus
ENSSHAG00000017017	RBM28	99	66.847	ENSCJAG00000017731	RBM28	93	70.080	Callithrix_jacchus
ENSSHAG00000017017	RBM28	99	67.659	ENSCAFG00000001667	RBM28	96	69.178	Canis_familiaris
ENSSHAG00000017017	RBM28	99	67.659	ENSCAFG00020021648	RBM28	96	69.178	Canis_lupus_dingo
ENSSHAG00000017017	RBM28	99	67.483	ENSCHIG00000014146	RBM28	96	68.356	Capra_hircus
ENSSHAG00000017017	RBM28	99	67.116	ENSTSYG00000002892	RBM28	96	67.886	Carlito_syrichta
ENSSHAG00000017017	RBM28	81	52.941	ENSCAPG00000013218	RBM28	100	53.045	Cavia_aperea
ENSSHAG00000017017	RBM28	99	67.439	ENSCPOG00000006253	RBM28	96	67.935	Cavia_porcellus
ENSSHAG00000017017	RBM28	99	66.263	ENSCCAG00000035105	RBM28	96	67.075	Cebus_capucinus
ENSSHAG00000017017	RBM28	99	65.462	ENSCATG00000040497	RBM28	96	66.712	Cercocebus_atys
ENSSHAG00000017017	RBM28	99	63.661	ENSCLAG00000003707	RBM28	96	63.934	Chinchilla_lanigera
ENSSHAG00000017017	RBM28	99	67.935	ENSCSAG00000010161	RBM28	96	67.755	Chlorocebus_sabaeus
ENSSHAG00000017017	RBM28	56	70.164	ENSCHOG00000001994	-	59	70.164	Choloepus_hoffmanni
ENSSHAG00000017017	RBM28	62	55.620	ENSCPBG00000018088	RBM28	97	55.299	Chrysemys_picta_bellii
ENSSHAG00000017017	RBM28	86	41.667	ENSCING00000009238	-	72	42.195	Ciona_intestinalis
ENSSHAG00000017017	RBM28	89	65.497	ENSCANG00000038397	RBM28	95	66.335	Colobus_angolensis_palliatus
ENSSHAG00000017017	RBM28	92	68.787	ENSCGRG00001021278	Rbm28	93	68.526	Cricetulus_griseus_chok1gshd
ENSSHAG00000017017	RBM28	99	63.733	ENSCGRG00000005098	Rbm28	96	64.411	Cricetulus_griseus_crigri
ENSSHAG00000017017	RBM28	98	47.586	ENSCSEG00000004212	rbm28	96	47.737	Cynoglossus_semilaevis
ENSSHAG00000017017	RBM28	60	55.353	ENSCVAG00000010493	rbm28	96	48.871	Cyprinodon_variegatus
ENSSHAG00000017017	RBM28	97	55.530	ENSDARG00000025332	rbm28	96	47.399	Danio_rerio
ENSSHAG00000017017	RBM28	99	67.984	ENSDNOG00000001124	RBM28	96	68.027	Dasypus_novemcinctus
ENSSHAG00000017017	RBM28	65	69.263	ENSDORG00000004184	Rbm28	93	69.474	Dipodomys_ordii
ENSSHAG00000017017	RBM28	70	36.312	FBgn0260456	CG4806	68	38.086	Drosophila_melanogaster
ENSSHAG00000017017	RBM28	99	59.030	ENSETEG00000007130	RBM28	96	61.989	Echinops_telfairi
ENSSHAG00000017017	RBM28	96	40.483	ENSEBUG00000004419	rbm28	91	40.773	Eptatretus_burgeri
ENSSHAG00000017017	RBM28	99	67.248	ENSEASG00005008528	RBM28	96	67.738	Equus_asinus_asinus
ENSSHAG00000017017	RBM28	99	67.560	ENSECAG00000007745	RBM28	96	67.604	Equus_caballus
ENSSHAG00000017017	RBM28	99	61.269	ENSEEUG00000002389	RBM28	96	60.946	Erinaceus_europaeus
ENSSHAG00000017017	RBM28	95	49.869	ENSELUG00000020602	rbm28	95	51.268	Esox_lucius
ENSSHAG00000017017	RBM28	99	69.337	ENSFCAG00000000946	RBM28	96	69.421	Felis_catus
ENSSHAG00000017017	RBM28	99	68.144	ENSFDAG00000010169	RBM28	96	68.144	Fukomys_damarensis
ENSSHAG00000017017	RBM28	59	52.326	ENSGMOG00000007091	rbm28	95	46.667	Gadus_morhua
ENSSHAG00000017017	RBM28	59	54.853	ENSGAFG00000004802	rbm28	97	54.767	Gambusia_affinis
ENSSHAG00000017017	RBM28	58	54.177	ENSGACG00000012612	rbm28	99	47.000	Gasterosteus_aculeatus
ENSSHAG00000017017	RBM28	82	67.582	ENSGAGG00000008873	RBM28	76	74.176	Gopherus_agassizii
ENSSHAG00000017017	RBM28	98	68.665	ENSGGOG00000004644	RBM28	99	68.016	Gorilla_gorilla
ENSSHAG00000017017	RBM28	90	49.701	ENSHBUG00000009611	rbm28	91	49.853	Haplochromis_burtoni
ENSSHAG00000017017	RBM28	99	67.538	ENSHGLG00000005409	RBM28	96	67.822	Heterocephalus_glaber_female
ENSSHAG00000017017	RBM28	99	67.538	ENSHGLG00100016458	RBM28	96	67.822	Heterocephalus_glaber_male
ENSSHAG00000017017	RBM28	82	46.479	ENSHCOG00000010597	rbm28	95	38.828	Hippocampus_comes
ENSSHAG00000017017	RBM28	56	46.682	ENSIPUG00000007103	rbm28	95	43.802	Ictalurus_punctatus
ENSSHAG00000017017	RBM28	99	66.802	ENSSTOG00000002169	RBM28	96	66.890	Ictidomys_tridecemlineatus
ENSSHAG00000017017	RBM28	58	71.122	ENSJJAG00000022400	Rbm28	96	61.925	Jaculus_jaculus
ENSSHAG00000017017	RBM28	60	53.229	ENSKMAG00000013348	rbm28	96	47.995	Kryptolebias_marmoratus
ENSSHAG00000017017	RBM28	59	54.920	ENSLBEG00000012998	rbm28	96	47.594	Labrus_bergylta
ENSSHAG00000017017	RBM28	74	54.529	ENSLACG00000010485	-	97	54.628	Latimeria_chalumnae
ENSSHAG00000017017	RBM28	95	56.024	ENSLOCG00000015541	rbm28	79	56.024	Lepisosteus_oculatus
ENSSHAG00000017017	RBM28	99	66.756	ENSLAFG00000010717	RBM28	96	67.891	Loxodonta_africana
ENSSHAG00000017017	RBM28	99	66.667	ENSMFAG00000031036	RBM28	96	67.344	Macaca_fascicularis
ENSSHAG00000017017	RBM28	99	66.578	ENSMMUG00000007250	RBM28	96	67.300	Macaca_mulatta
ENSSHAG00000017017	RBM28	99	66.173	ENSMNEG00000036970	RBM28	96	67.852	Macaca_nemestrina
ENSSHAG00000017017	RBM28	82	64.551	ENSMLEG00000037717	RBM28	95	66.143	Mandrillus_leucophaeus
ENSSHAG00000017017	RBM28	98	48.999	ENSMAMG00000008525	rbm28	96	49.660	Mastacembelus_armatus
ENSSHAG00000017017	RBM28	94	47.612	ENSMZEG00005019625	rbm28	99	47.411	Maylandia_zebra
ENSSHAG00000017017	RBM28	92	67.396	ENSMAUG00000002263	Rbm28	96	63.311	Mesocricetus_auratus
ENSSHAG00000017017	RBM28	96	66.897	ENSMICG00000000107	RBM28	99	67.172	Microcebus_murinus
ENSSHAG00000017017	RBM28	99	66.209	ENSMOCG00000014615	Rbm28	96	66.346	Microtus_ochrogaster
ENSSHAG00000017017	RBM28	58	53.938	ENSMMOG00000008600	rbm28	99	50.208	Mola_mola
ENSSHAG00000017017	RBM28	99	78.091	ENSMODG00000015151	RBM28	96	80.408	Monodelphis_domestica
ENSSHAG00000017017	RBM28	58	54.206	ENSMALG00000006419	rbm28	96	46.854	Monopterus_albus
ENSSHAG00000017017	RBM28	99	64.810	MGP_CAROLIEiJ_G0028162	Rbm28	96	66.713	Mus_caroli
ENSSHAG00000017017	RBM28	99	66.025	ENSMUSG00000029701	Rbm28	96	66.897	Mus_musculus
ENSSHAG00000017017	RBM28	99	65.569	MGP_PahariEiJ_G0021920	Rbm28	96	66.437	Mus_pahari
ENSSHAG00000017017	RBM28	99	65.887	MGP_SPRETEiJ_G0029162	Rbm28	96	66.759	Mus_spretus
ENSSHAG00000017017	RBM28	99	66.355	ENSMPUG00000006511	RBM28	96	68.022	Mustela_putorius_furo
ENSSHAG00000017017	RBM28	99	66.216	ENSMLUG00000002186	RBM28	96	66.486	Myotis_lucifugus
ENSSHAG00000017017	RBM28	99	62.500	ENSNGAG00000017946	-	96	63.223	Nannospalax_galili
ENSSHAG00000017017	RBM28	99	65.181	ENSNGAG00000006480	-	96	65.503	Nannospalax_galili
ENSSHAG00000017017	RBM28	99	65.688	ENSNLEG00000012307	RBM28	96	67.072	Nomascus_leucogenys
ENSSHAG00000017017	RBM28	91	84.524	ENSMEUG00000009611	RBM28	90	85.714	Notamacropus_eugenii
ENSSHAG00000017017	RBM28	89	61.644	ENSOPRG00000015140	RBM28	86	61.952	Ochotona_princeps
ENSSHAG00000017017	RBM28	99	64.247	ENSODEG00000003213	-	96	64.432	Octodon_degus
ENSSHAG00000017017	RBM28	75	73.515	ENSODEG00000013217	-	81	73.872	Octodon_degus
ENSSHAG00000017017	RBM28	97	47.724	ENSONIG00000014924	rbm28	96	47.347	Oreochromis_niloticus
ENSSHAG00000017017	RBM28	99	61.394	ENSOANG00000000815	-	96	62.228	Ornithorhynchus_anatinus
ENSSHAG00000017017	RBM28	99	65.949	ENSOCUG00000003009	RBM28	96	65.995	Oryctolagus_cuniculus
ENSSHAG00000017017	RBM28	60	54.897	ENSORLG00000009636	rbm28	96	48.095	Oryzias_latipes
ENSSHAG00000017017	RBM28	60	54.773	ENSORLG00020002123	rbm28	99	47.739	Oryzias_latipes_hni
ENSSHAG00000017017	RBM28	98	54.144	ENSORLG00015015030	rbm28	93	54.494	Oryzias_latipes_hsok
ENSSHAG00000017017	RBM28	60	56.335	ENSOMEG00000007801	rbm28	96	49.664	Oryzias_melastigma
ENSSHAG00000017017	RBM28	91	66.382	ENSOGAG00000006011	RBM28	93	66.382	Otolemur_garnettii
ENSSHAG00000017017	RBM28	99	67.391	ENSOARG00000002547	RBM28	96	67.675	Ovis_aries
ENSSHAG00000017017	RBM28	99	66.845	ENSPPAG00000041730	RBM28	96	67.436	Pan_paniscus
ENSSHAG00000017017	RBM28	99	68.966	ENSPPRG00000004420	RBM28	96	67.950	Panthera_pardus
ENSSHAG00000017017	RBM28	99	69.061	ENSPTIG00000008550	RBM28	96	68.044	Panthera_tigris_altaica
ENSSHAG00000017017	RBM28	99	67.112	ENSPTRG00000019659	RBM28	96	67.707	Pan_troglodytes
ENSSHAG00000017017	RBM28	99	66.003	ENSPANG00000022295	RBM28	96	67.028	Papio_anubis
ENSSHAG00000017017	RBM28	97	49.001	ENSPKIG00000023453	rbm28	96	49.020	Paramormyrops_kingsleyae
ENSSHAG00000017017	RBM28	97	47.795	ENSPMGG00000012840	rbm28	93	56.044	Periophthalmus_magnuspinnatus
ENSSHAG00000017017	RBM28	99	63.611	ENSPEMG00000020673	Rbm28	96	65.498	Peromyscus_maniculatus_bairdii
ENSSHAG00000017017	RBM28	99	80.939	ENSPCIG00000012810	RBM28	96	82.427	Phascolarctos_cinereus
ENSSHAG00000017017	RBM28	59	55.809	ENSPFOG00000018209	rbm28	96	48.525	Poecilia_formosa
ENSSHAG00000017017	RBM28	59	56.264	ENSPLAG00000016078	rbm28	91	49.256	Poecilia_latipinna
ENSSHAG00000017017	RBM28	59	56.036	ENSPMEG00000004292	rbm28	96	48.794	Poecilia_mexicana
ENSSHAG00000017017	RBM28	59	55.809	ENSPREG00000014287	rbm28	94	49.041	Poecilia_reticulata
ENSSHAG00000017017	RBM28	99	67.204	ENSPPYG00000017975	RBM28	96	67.891	Pongo_abelii
ENSSHAG00000017017	RBM28	74	63.380	ENSPCAG00000008223	RBM28	79	63.712	Procavia_capensis
ENSSHAG00000017017	RBM28	99	66.667	ENSPCOG00000016797	RBM28	96	66.667	Propithecus_coquereli
ENSSHAG00000017017	RBM28	75	82.547	ENSPVAG00000005443	RBM28	70	86.070	Pteropus_vampyrus
ENSSHAG00000017017	RBM28	97	47.684	ENSPNYG00000014003	rbm28	96	48.048	Pundamilia_nyererei
ENSSHAG00000017017	RBM28	99	64.472	ENSRNOG00000005468	Rbm28	96	66.025	Rattus_norvegicus
ENSSHAG00000017017	RBM28	99	65.821	ENSRBIG00000033990	RBM28	96	66.396	Rhinopithecus_bieti
ENSSHAG00000017017	RBM28	99	65.909	ENSRROG00000040747	RBM28	96	66.486	Rhinopithecus_roxellana
ENSSHAG00000017017	RBM28	89	60.446	ENSSBOG00000012308	RBM28	95	61.173	Saimiri_boliviensis_boliviensis
ENSSHAG00000017017	RBM28	58	58.782	ENSSFOG00015001231	rbm28	96	52.559	Scleropages_formosus
ENSSHAG00000017017	RBM28	60	52.304	ENSSMAG00000003885	rbm28	98	50.932	Scophthalmus_maximus
ENSSHAG00000017017	RBM28	59	55.734	ENSSDUG00000014270	rbm28	94	52.419	Seriola_dumerili
ENSSHAG00000017017	RBM28	59	55.505	ENSSLDG00000020099	rbm28	96	48.271	Seriola_lalandi_dorsalis
ENSSHAG00000017017	RBM28	78	75.819	ENSSARG00000008303	RBM28	77	75.819	Sorex_araneus
ENSSHAG00000017017	RBM28	68	72.059	ENSSPUG00000000838	RBM28	79	72.059	Sphenodon_punctatus
ENSSHAG00000017017	RBM28	59	54.128	ENSSPAG00000023305	rbm28	99	48.343	Stegastes_partitus
ENSSHAG00000017017	RBM28	99	67.248	ENSSSCG00000031847	RBM28	96	69.064	Sus_scrofa
ENSSHAG00000017017	RBM28	60	55.204	ENSTRUG00000013311	rbm28	96	47.947	Takifugu_rubripes
ENSSHAG00000017017	RBM28	97	49.307	ENSTNIG00000017962	rbm28	96	49.123	Tetraodon_nigroviridis
ENSSHAG00000017017	RBM28	85	71.512	ENSTBEG00000012749	RBM28	81	72.271	Tupaia_belangeri
ENSSHAG00000017017	RBM28	99	66.848	ENSTTRG00000013647	RBM28	96	66.939	Tursiops_truncatus
ENSSHAG00000017017	RBM28	99	63.469	ENSUAMG00000006949	RBM28	96	63.870	Ursus_americanus
ENSSHAG00000017017	RBM28	99	67.160	ENSUMAG00000005997	RBM28	96	68.579	Ursus_maritimus
ENSSHAG00000017017	RBM28	87	63.722	ENSVPAG00000008304	RBM28	87	64.036	Vicugna_pacos
ENSSHAG00000017017	RBM28	99	67.524	ENSVVUG00000007270	RBM28	96	69.041	Vulpes_vulpes
ENSSHAG00000017017	RBM28	97	54.717	ENSXETG00000009271	rbm28	95	53.723	Xenopus_tropicalis
ENSSHAG00000017017	RBM28	60	53.580	ENSXCOG00000020357	rbm28	99	50.515	Xiphophorus_couchianus
ENSSHAG00000017017	RBM28	99	49.332	ENSXMAG00000004415	rbm28	96	49.730	Xiphophorus_maculatus