EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000017038 (Gene tree)
Gene ID: 100926540
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 101360 bases
Position: chrGL841366.1:2471443-2572802
Accession: 100926540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000020084	ResIII	PF04851.15	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000020244	-	3991	-	ENSSHAP00000020084	912 (aa)	XP_003760306	G3WXC9

Gene Model

Click here to download ENSSHAG00000017038's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000017038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000017038	-	55	32.943	ENSSHAG00000017395	CHD1L	50	32.943
ENSSHAG00000017038	-	71	43.433	ENSSHAG00000000110	RAD54L	85	43.433
ENSSHAG00000017038	-	57	33.512	ENSSHAG00000001331	-	50	33.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000017038	-	79	81.189	ENSG00000265817	FSBP	99	81.189	Homo_sapiens
ENSSHAG00000017038	-	99	75.412	ENSG00000197275	RAD54B	99	75.412	Homo_sapiens
ENSSHAG00000017038	-	99	73.275	ENSAMEG00000005834	-	99	73.275	Ailuropoda_melanoleuca
ENSSHAG00000017038	-	99	54.783	ENSACIG00000013005	rad54b	99	54.783	Amphilophus_citrinellus
ENSSHAG00000017038	-	99	55.485	ENSAOCG00000008523	rad54b	99	55.485	Amphiprion_ocellaris
ENSSHAG00000017038	-	99	54.754	ENSAPEG00000001673	rad54b	99	54.863	Amphiprion_percula
ENSSHAG00000017038	-	99	54.348	ENSATEG00000001527	rad54b	99	54.348	Anabas_testudineus
ENSSHAG00000017038	-	99	69.156	ENSAPLG00000014366	-	99	69.264	Anas_platyrhynchos
ENSSHAG00000017038	-	88	71.536	ENSACAG00000003671	-	99	71.536	Anolis_carolinensis
ENSSHAG00000017038	-	71	80.894	ENSANAG00000019528	-	100	80.894	Aotus_nancymaae
ENSSHAG00000017038	-	86	59.899	ENSACLG00000007826	rad54b	91	59.899	Astatotilapia_calliptera
ENSSHAG00000017038	-	85	59.898	ENSAMXG00000039985	rad54b	94	59.623	Astyanax_mexicanus
ENSSHAG00000017038	-	99	72.777	ENSBTAG00000000632	RAD54B	99	72.777	Bos_taurus
ENSSHAG00000017038	-	78	36.153	WBGene00013792	Y116A8C.13	82	36.016	Caenorhabditis_elegans
ENSSHAG00000017038	-	100	73.742	ENSCJAG00000000080	-	100	79.752	Callithrix_jacchus
ENSSHAG00000017038	-	99	72.519	ENSCAFG00000009179	RAD54B	99	72.519	Canis_familiaris
ENSSHAG00000017038	-	99	72.628	ENSCAFG00020012084	-	99	72.628	Canis_lupus_dingo
ENSSHAG00000017038	-	99	72.558	ENSCHIG00000008230	-	99	72.558	Capra_hircus
ENSSHAG00000017038	-	99	74.314	ENSTSYG00000013234	-	99	74.314	Carlito_syrichta
ENSSHAG00000017038	-	99	72.198	ENSCPOG00000011643	-	99	72.198	Cavia_porcellus
ENSSHAG00000017038	-	100	74.013	ENSCCAG00000011754	-	100	80.138	Cebus_capucinus
ENSSHAG00000017038	-	99	74.533	ENSCATG00000030661	-	99	80.360	Cercocebus_atys
ENSSHAG00000017038	-	100	72.727	ENSCLAG00000010476	-	100	72.727	Chinchilla_lanigera
ENSSHAG00000017038	-	99	74.863	ENSCSAG00000012712	-	99	74.863	Chlorocebus_sabaeus
ENSSHAG00000017038	-	100	71.055	ENSCPBG00000003204	-	99	71.547	Chrysemys_picta_bellii
ENSSHAG00000017038	-	99	74.753	ENSCANG00000017939	-	99	80.360	Colobus_angolensis_palliatus
ENSSHAG00000017038	-	99	70.614	ENSCGRG00001020184	Rad54b	99	70.614	Cricetulus_griseus_chok1gshd
ENSSHAG00000017038	-	99	69.923	ENSCGRG00000016752	Rad54b	99	69.923	Cricetulus_griseus_crigri
ENSSHAG00000017038	-	87	59.301	ENSCSEG00000001601	rad54b	94	59.301	Cynoglossus_semilaevis
ENSSHAG00000017038	-	99	56.169	ENSCVAG00000009200	rad54b	99	56.169	Cyprinodon_variegatus
ENSSHAG00000017038	-	99	54.313	ENSDARG00000092134	rad54b	99	62.791	Danio_rerio
ENSSHAG00000017038	-	99	72.319	ENSDNOG00000015535	-	99	72.319	Dasypus_novemcinctus
ENSSHAG00000017038	-	99	73.407	ENSDORG00000002492	Rad54b	99	73.407	Dipodomys_ordii
ENSSHAG00000017038	-	87	72.061	ENSETEG00000010605	-	100	72.061	Echinops_telfairi
ENSSHAG00000017038	-	99	46.055	ENSEBUG00000009104	rad54b	99	45.949	Eptatretus_burgeri
ENSSHAG00000017038	-	96	72.820	ENSEASG00005004021	-	99	72.820	Equus_asinus_asinus
ENSSHAG00000017038	-	99	72.837	ENSECAG00000021949	-	99	72.837	Equus_caballus
ENSSHAG00000017038	-	78	79.114	ENSEEUG00000008056	-	79	79.114	Erinaceus_europaeus
ENSSHAG00000017038	-	99	54.097	ENSELUG00000009287	rad54b	99	54.307	Esox_lucius
ENSSHAG00000017038	-	99	73.275	ENSFCAG00000015513	-	99	80.083	Felis_catus
ENSSHAG00000017038	-	99	68.039	ENSFALG00000005467	-	99	68.039	Ficedula_albicollis
ENSSHAG00000017038	-	99	73.436	ENSFDAG00000020541	-	99	73.436	Fukomys_damarensis
ENSSHAG00000017038	-	86	59.449	ENSFHEG00000014382	rad54b	87	59.449	Fundulus_heteroclitus
ENSSHAG00000017038	-	86	58.396	ENSGMOG00000014774	rad54b	98	58.396	Gadus_morhua
ENSSHAG00000017038	-	99	68.147	ENSGALG00000043597	RAD54B	99	68.147	Gallus_gallus
ENSSHAG00000017038	-	99	54.584	ENSGAFG00000007901	rad54b	99	54.689	Gambusia_affinis
ENSSHAG00000017038	-	99	54.623	ENSGACG00000009128	rad54b	100	54.623	Gasterosteus_aculeatus
ENSSHAG00000017038	-	99	71.010	ENSGAGG00000018747	-	99	71.010	Gopherus_agassizii
ENSSHAG00000017038	-	99	75.192	ENSGGOG00000023516	-	99	75.192	Gorilla_gorilla
ENSSHAG00000017038	-	99	54.352	ENSHBUG00000016017	rad54b	99	54.352	Haplochromis_burtoni
ENSSHAG00000017038	-	99	71.756	ENSHGLG00000008263	RAD54B	99	71.756	Heterocephalus_glaber_female
ENSSHAG00000017038	-	99	70.964	ENSHGLG00100008108	-	99	70.964	Heterocephalus_glaber_male
ENSSHAG00000017038	-	99	54.270	ENSHCOG00000004764	rad54b	98	56.388	Hippocampus_comes
ENSSHAG00000017038	-	99	53.542	ENSIPUG00000018531	rad54b	99	53.542	Ictalurus_punctatus
ENSSHAG00000017038	-	99	71.965	ENSSTOG00000010791	-	99	71.965	Ictidomys_tridecemlineatus
ENSSHAG00000017038	-	99	72.448	ENSJJAG00000010314	Rad54b	99	72.448	Jaculus_jaculus
ENSSHAG00000017038	-	87	59.000	ENSKMAG00000004744	rad54b	93	59.000	Kryptolebias_marmoratus
ENSSHAG00000017038	-	81	70.375	ENSLACG00000000859	-	100	70.375	Latimeria_chalumnae
ENSSHAG00000017038	-	100	58.431	ENSLOCG00000010100	rad54b	99	58.431	Lepisosteus_oculatus
ENSSHAG00000017038	-	88	75.780	ENSLAFG00000015315	-	99	75.780	Loxodonta_africana
ENSSHAG00000017038	-	99	74.753	ENSMFAG00000031629	-	99	80.498	Macaca_fascicularis
ENSSHAG00000017038	-	99	74.753	ENSMMUG00000005659	-	99	74.753	Macaca_mulatta
ENSSHAG00000017038	-	99	74.753	ENSMNEG00000016408	-	99	74.753	Macaca_nemestrina
ENSSHAG00000017038	-	99	74.753	ENSMLEG00000006946	-	99	74.753	Mandrillus_leucophaeus
ENSSHAG00000017038	-	99	54.545	ENSMAMG00000012269	rad54b	99	54.545	Mastacembelus_armatus
ENSSHAG00000017038	-	99	54.352	ENSMZEG00005005281	rad54b	95	59.647	Maylandia_zebra
ENSSHAG00000017038	-	99	68.472	ENSMGAG00000012024	-	99	68.472	Meleagris_gallopavo
ENSSHAG00000017038	-	99	70.911	ENSMAUG00000013586	Rad54b	99	70.911	Mesocricetus_auratus
ENSSHAG00000017038	-	93	75.323	ENSMICG00000000754	-	98	75.323	Microcebus_murinus
ENSSHAG00000017038	-	99	69.408	ENSMOCG00000020035	Rad54b	99	69.408	Microtus_ochrogaster
ENSSHAG00000017038	-	99	54.615	ENSMMOG00000003394	rad54b	99	54.615	Mola_mola
ENSSHAG00000017038	-	88	89.441	ENSMODG00000007343	-	99	89.441	Monodelphis_domestica
ENSSHAG00000017038	-	71	60.714	ENSMALG00000001520	rad54b	99	60.714	Monopterus_albus
ENSSHAG00000017038	-	99	70.472	MGP_CAROLIEiJ_G0025810	Rad54b	99	70.472	Mus_caroli
ENSSHAG00000017038	-	99	70.285	ENSMUSG00000078773	Rad54b	99	70.285	Mus_musculus
ENSSHAG00000017038	-	99	70.033	MGP_PahariEiJ_G0023933	Rad54b	99	70.033	Mus_pahari
ENSSHAG00000017038	-	99	70.801	MGP_SPRETEiJ_G0026758	Rad54b	99	70.801	Mus_spretus
ENSSHAG00000017038	-	88	77.778	ENSMPUG00000008878	-	99	77.778	Mustela_putorius_furo
ENSSHAG00000017038	-	99	72.997	ENSMLUG00000008953	-	99	73.165	Myotis_lucifugus
ENSSHAG00000017038	-	99	72.926	ENSNGAG00000017537	Rad54b	99	72.926	Nannospalax_galili
ENSSHAG00000017038	-	99	54.674	ENSNBRG00000013394	rad54b	99	54.674	Neolamprologus_brichardi
ENSSHAG00000017038	-	99	75.412	ENSNLEG00000003062	-	99	81.189	Nomascus_leucogenys
ENSSHAG00000017038	-	83	83.468	ENSMEUG00000012426	-	83	83.468	Notamacropus_eugenii
ENSSHAG00000017038	-	87	73.300	ENSODEG00000002650	-	94	79.199	Octodon_degus
ENSSHAG00000017038	-	99	72.167	ENSODEG00000019564	-	99	72.167	Octodon_degus
ENSSHAG00000017038	-	99	55.266	ENSONIG00000006067	rad54b	99	55.266	Oreochromis_niloticus
ENSSHAG00000017038	-	82	78.000	ENSOANG00000011348	-	99	78.000	Ornithorhynchus_anatinus
ENSSHAG00000017038	-	99	72.777	ENSOCUG00000016478	-	99	72.777	Oryctolagus_cuniculus
ENSSHAG00000017038	-	99	55.449	ENSORLG00000008918	rad54b	99	63.651	Oryzias_latipes
ENSSHAG00000017038	-	70	63.651	ENSORLG00020012171	rad54b	99	63.651	Oryzias_latipes_hni
ENSSHAG00000017038	-	99	55.757	ENSORLG00015018536	rad54b	99	55.757	Oryzias_latipes_hsok
ENSSHAG00000017038	-	83	61.240	ENSOMEG00000004345	rad54b	99	61.240	Oryzias_melastigma
ENSSHAG00000017038	-	99	73.655	ENSOGAG00000007854	-	99	73.655	Otolemur_garnettii
ENSSHAG00000017038	-	88	77.335	ENSOARG00000007691	-	99	77.335	Ovis_aries
ENSSHAG00000017038	-	99	73.765	ENSPPAG00000029572	-	99	73.765	Pan_paniscus
ENSSHAG00000017038	-	99	73.275	ENSPPRG00000007571	-	99	80.221	Panthera_pardus
ENSSHAG00000017038	-	79	80.498	ENSPTIG00000012670	-	99	80.498	Panthera_tigris_altaica
ENSSHAG00000017038	-	99	75.192	ENSPTRG00000020427	-	99	81.051	Pan_troglodytes
ENSSHAG00000017038	-	99	74.753	ENSPANG00000019566	-	99	74.753	Papio_anubis
ENSSHAG00000017038	-	99	58.215	ENSPKIG00000014974	rad54b	99	58.215	Paramormyrops_kingsleyae
ENSSHAG00000017038	-	100	70.076	ENSPSIG00000002383	-	98	75.155	Pelodiscus_sinensis
ENSSHAG00000017038	-	99	70.350	ENSPEMG00000012133	Rad54b	99	70.350	Peromyscus_maniculatus_bairdii
ENSSHAG00000017038	-	86	59.245	ENSPMAG00000002916	rad54b	98	59.548	Petromyzon_marinus
ENSSHAG00000017038	-	88	91.915	ENSPCIG00000020151	-	93	91.915	Phascolarctos_cinereus
ENSSHAG00000017038	-	99	54.995	ENSPFOG00000023411	rad54b	99	54.995	Poecilia_formosa
ENSSHAG00000017038	-	99	55.031	ENSPLAG00000010430	rad54b	99	55.031	Poecilia_latipinna
ENSSHAG00000017038	-	99	55.111	ENSPMEG00000016873	rad54b	97	58.688	Poecilia_mexicana
ENSSHAG00000017038	-	99	55.016	ENSPREG00000018443	rad54b	99	54.958	Poecilia_reticulata
ENSSHAG00000017038	-	99	75.192	ENSPPYG00000018750	-	99	75.192	Pongo_abelii
ENSSHAG00000017038	-	99	74.643	ENSPCOG00000026845	-	99	80.636	Propithecus_coquereli
ENSSHAG00000017038	-	81	78.108	ENSPVAG00000000261	-	86	78.108	Pteropus_vampyrus
ENSSHAG00000017038	-	85	60.178	ENSPNYG00000018303	rad54b	95	60.178	Pundamilia_nyererei
ENSSHAG00000017038	-	99	55.209	ENSPNAG00000000295	rad54b	99	55.209	Pygocentrus_nattereri
ENSSHAG00000017038	-	99	68.750	ENSRNOG00000039949	Rad54b	99	68.750	Rattus_norvegicus
ENSSHAG00000017038	-	99	74.424	ENSRBIG00000020419	-	99	74.424	Rhinopithecus_bieti
ENSSHAG00000017038	-	99	74.424	ENSRROG00000039897	-	99	74.424	Rhinopithecus_roxellana
ENSSHAG00000017038	-	61	41.941	YBR073W	RDH54	79	37.786	Saccharomyces_cerevisiae
ENSSHAG00000017038	-	100	73.632	ENSSBOG00000028501	-	100	73.632	Saimiri_boliviensis_boliviensis
ENSSHAG00000017038	-	66	64.452	ENSSFOG00015008483	rad54b	93	64.452	Scleropages_formosus
ENSSHAG00000017038	-	99	54.705	ENSSMAG00000018659	rad54b	99	54.705	Scophthalmus_maximus
ENSSHAG00000017038	-	99	54.207	ENSSDUG00000001122	rad54b	98	54.526	Seriola_dumerili
ENSSHAG00000017038	-	99	54.189	ENSSLDG00000013787	rad54b	99	54.449	Seriola_lalandi_dorsalis
ENSSHAG00000017038	-	100	69.071	ENSSPUG00000016497	-	99	69.071	Sphenodon_punctatus
ENSSHAG00000017038	-	99	55.761	ENSSPAG00000012800	rad54b	99	55.761	Stegastes_partitus
ENSSHAG00000017038	-	100	73.165	ENSSSCG00000006101	-	99	77.987	Sus_scrofa
ENSSHAG00000017038	-	99	67.791	ENSTGUG00000011880	-	99	67.791	Taeniopygia_guttata
ENSSHAG00000017038	-	86	59.900	ENSTRUG00000010015	rad54b	99	53.943	Takifugu_rubripes
ENSSHAG00000017038	-	99	69.923	ENSTTRG00000006312	-	99	69.923	Tursiops_truncatus
ENSSHAG00000017038	-	99	73.165	ENSUMAG00000016401	-	99	73.165	Ursus_maritimus
ENSSHAG00000017038	-	99	72.289	ENSVPAG00000003157	-	99	72.289	Vicugna_pacos
ENSSHAG00000017038	-	99	55.203	ENSXETG00000025924	rad54b	99	60.125	Xenopus_tropicalis
ENSSHAG00000017038	-	87	58.701	ENSXMAG00000013141	rad54b	93	58.701	Xiphophorus_maculatus