EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000017267 (Gene tree)
Gene ID: 100930099
Gene Symbol: CWC25
Alias: CCDC49|FLJ20291
Full Name: CWC25 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 49913 bases
Position: chrGL856827.1:2600464-2650376
Accession: 100918640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000020355	CWC25	PF12542.8	1.2e-19	1	1
ENSSHAP00000020356	CWC25	PF12542.8	1.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000020516	CWC25-201	1179	-	ENSSHAP00000020355	392 (aa)	-	G3WY50
ENSSHAT00000020517	CWC25-202	1254	-	ENSSHAP00000020356	417 (aa)	XP_003768325	G3WY51
ENSSHAT00000020518	CWC25-203	1092	-	ENSSHAP00000020357	363 (aa)	-	G3WY52

Gene Model

Click here to download ENSSHAG00000017267's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr00562	Inositol phosphate metabolism	KEGG
shr01100	Metabolic pathways	KEGG
shr04070	Phosphatidylinositol signaling system	KEGG
shr04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000017267's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000017267	CWC25	100	83.294	ENSG00000273559	CWC25	94	100.000	Homo_sapiens
ENSSHAG00000017267	CWC25	100	83.765	ENSAMEG00000004292	CWC25	100	84.000	Ailuropoda_melanoleuca
ENSSHAG00000017267	CWC25	99	51.478	ENSAPEG00000013237	cwc25	100	52.414	Amphiprion_percula
ENSSHAG00000017267	CWC25	100	51.236	ENSATEG00000000799	cwc25	100	53.118	Anabas_testudineus
ENSSHAG00000017267	CWC25	99	68.160	ENSAPLG00000003710	CWC25	99	68.941	Anas_platyrhynchos
ENSSHAG00000017267	CWC25	100	69.596	ENSACAG00000013140	CWC25	100	67.143	Anolis_carolinensis
ENSSHAG00000017267	CWC25	100	68.825	ENSANAG00000033550	CWC25	89	84.536	Aotus_nancymaae
ENSSHAG00000017267	CWC25	99	48.931	ENSAMXG00000035125	cwc25	99	49.409	Astyanax_mexicanus
ENSSHAG00000017267	CWC25	100	85.176	ENSBTAG00000030591	CWC25	100	85.412	Bos_taurus
ENSSHAG00000017267	CWC25	100	81.882	ENSCJAG00000008289	CWC25	100	82.118	Callithrix_jacchus
ENSSHAG00000017267	CWC25	100	84.286	ENSCAFG00000016561	CWC25	100	84.286	Canis_familiaris
ENSSHAG00000017267	CWC25	100	84.048	ENSCAFG00020023017	CWC25	100	84.048	Canis_lupus_dingo
ENSSHAG00000017267	CWC25	100	84.235	ENSCHIG00000015063	CWC25	100	84.471	Capra_hircus
ENSSHAG00000017267	CWC25	100	75.352	ENSTSYG00000011332	CWC25	100	72.770	Carlito_syrichta
ENSSHAG00000017267	CWC25	99	75.297	ENSCAPG00000014542	CWC25	99	76.960	Cavia_aperea
ENSSHAG00000017267	CWC25	100	74.940	ENSCPOG00000015127	CWC25	100	76.190	Cavia_porcellus
ENSSHAG00000017267	CWC25	100	82.118	ENSCCAG00000028719	CWC25	100	82.353	Cebus_capucinus
ENSSHAG00000017267	CWC25	100	77.986	ENSCATG00000040771	CWC25	100	78.588	Cercocebus_atys
ENSSHAG00000017267	CWC25	100	77.069	ENSCLAG00000017102	CWC25	87	98.601	Chinchilla_lanigera
ENSSHAG00000017267	CWC25	100	83.688	ENSCSAG00000002654	CWC25	100	83.688	Chlorocebus_sabaeus
ENSSHAG00000017267	CWC25	99	75.663	ENSCPBG00000027490	CWC25	88	75.663	Chrysemys_picta_bellii
ENSSHAG00000017267	CWC25	100	77.752	ENSCANG00000037099	CWC25	100	78.353	Colobus_angolensis_palliatus
ENSSHAG00000017267	CWC25	100	84.000	ENSCGRG00001020785	Cwc25	100	84.235	Cricetulus_griseus_chok1gshd
ENSSHAG00000017267	CWC25	100	84.000	ENSCGRG00000005085	Cwc25	100	84.235	Cricetulus_griseus_crigri
ENSSHAG00000017267	CWC25	100	51.030	ENSCSEG00000016305	cwc25	100	50.115	Cynoglossus_semilaevis
ENSSHAG00000017267	CWC25	100	48.874	ENSCVAG00000007828	cwc25	100	52.326	Cyprinodon_variegatus
ENSSHAG00000017267	CWC25	100	52.326	ENSDARG00000003382	cwc25	100	52.235	Danio_rerio
ENSSHAG00000017267	CWC25	100	83.803	ENSDNOG00000042410	CWC25	100	84.038	Dasypus_novemcinctus
ENSSHAG00000017267	CWC25	100	83.529	ENSDORG00000003061	Cwc25	100	83.765	Dipodomys_ordii
ENSSHAG00000017267	CWC25	64	41.969	FBgn0031452	Cwc25	63	42.021	Drosophila_melanogaster
ENSSHAG00000017267	CWC25	100	50.360	ENSEBUG00000002947	cwc25	82	61.972	Eptatretus_burgeri
ENSSHAG00000017267	CWC25	100	84.941	ENSEASG00005001871	CWC25	100	85.176	Equus_asinus_asinus
ENSSHAG00000017267	CWC25	100	85.176	ENSECAG00000019122	CWC25	100	85.412	Equus_caballus
ENSSHAG00000017267	CWC25	80	70.279	ENSEEUG00000000018	CWC25	100	70.279	Erinaceus_europaeus
ENSSHAG00000017267	CWC25	100	84.706	ENSFCAG00000028119	CWC25	100	84.941	Felis_catus
ENSSHAG00000017267	CWC25	99	60.731	ENSFALG00000013293	CWC25	99	61.358	Ficedula_albicollis
ENSSHAG00000017267	CWC25	100	72.662	ENSFDAG00000007745	CWC25	100	71.703	Fukomys_damarensis
ENSSHAG00000017267	CWC25	100	52.582	ENSFHEG00000004754	cwc25	100	54.060	Fundulus_heteroclitus
ENSSHAG00000017267	CWC25	64	72.152	ENSGMOG00000013001	cwc25	72	72.289	Gadus_morhua
ENSSHAG00000017267	CWC25	100	73.634	ENSGALG00000001624	CWC25	100	73.634	Gallus_gallus
ENSSHAG00000017267	CWC25	100	75.238	ENSGAGG00000022972	CWC25	100	76.429	Gopherus_agassizii
ENSSHAG00000017267	CWC25	100	82.824	ENSGGOG00000007083	CWC25	100	84.000	Gorilla_gorilla
ENSSHAG00000017267	CWC25	100	77.327	ENSHGLG00000014785	CWC25	100	77.327	Heterocephalus_glaber_female
ENSSHAG00000017267	CWC25	100	74.359	ENSHGLG00100017354	CWC25	100	70.629	Heterocephalus_glaber_male
ENSSHAG00000017267	CWC25	100	51.869	ENSIPUG00000012581	CWC25	100	49.884	Ictalurus_punctatus
ENSSHAG00000017267	CWC25	100	81.647	ENSSTOG00000014268	CWC25	100	83.059	Ictidomys_tridecemlineatus
ENSSHAG00000017267	CWC25	100	49.887	ENSKMAG00000015418	cwc25	99	53.009	Kryptolebias_marmoratus
ENSSHAG00000017267	CWC25	85	54.062	ENSLACG00000001743	CWC25	100	52.101	Latimeria_chalumnae
ENSSHAG00000017267	CWC25	100	56.308	ENSLOCG00000013707	cwc25	100	56.047	Lepisosteus_oculatus
ENSSHAG00000017267	CWC25	100	83.529	ENSLAFG00000002238	CWC25	100	83.765	Loxodonta_africana
ENSSHAG00000017267	CWC25	85	80.609	ENSMFAG00000002357	CWC25	100	80.886	Macaca_fascicularis
ENSSHAG00000017267	CWC25	85	80.609	ENSMMUG00000002944	CWC25	90	80.886	Macaca_mulatta
ENSSHAG00000017267	CWC25	100	83.529	ENSMNEG00000033729	CWC25	100	83.765	Macaca_nemestrina
ENSSHAG00000017267	CWC25	97	82.732	ENSMLEG00000033355	CWC25	100	82.990	Mandrillus_leucophaeus
ENSSHAG00000017267	CWC25	100	50.235	ENSMAMG00000005194	cwc25	100	52.681	Mastacembelus_armatus
ENSSHAG00000017267	CWC25	99	70.784	ENSMGAG00000005158	CWC25	99	72.986	Meleagris_gallopavo
ENSSHAG00000017267	CWC25	100	83.765	ENSMICG00000003004	CWC25	100	84.000	Microcebus_murinus
ENSSHAG00000017267	CWC25	100	81.882	ENSMOCG00000000224	Cwc25	100	83.059	Microtus_ochrogaster
ENSSHAG00000017267	CWC25	100	91.627	ENSMODG00000012627	CWC25	100	92.584	Monodelphis_domestica
ENSSHAG00000017267	CWC25	100	80.576	MGP_CAROLIEiJ_G0017064	Cwc25	100	82.536	Mus_caroli
ENSSHAG00000017267	CWC25	100	80.941	ENSMUSG00000018541	Cwc25	100	81.412	Mus_musculus
ENSSHAG00000017267	CWC25	100	80.282	MGP_PahariEiJ_G0018193	Cwc25	100	79.343	Mus_pahari
ENSSHAG00000017267	CWC25	100	81.176	MGP_SPRETEiJ_G0017910	Cwc25	100	81.647	Mus_spretus
ENSSHAG00000017267	CWC25	100	85.238	ENSMPUG00000015077	CWC25	100	85.476	Mustela_putorius_furo
ENSSHAG00000017267	CWC25	100	84.471	ENSMLUG00000029653	CWC25	100	84.706	Myotis_lucifugus
ENSSHAG00000017267	CWC25	100	81.925	ENSNGAG00000007394	Cwc25	100	81.925	Nannospalax_galili
ENSSHAG00000017267	CWC25	100	82.824	ENSNLEG00000000617	CWC25	100	84.000	Nomascus_leucogenys
ENSSHAG00000017267	CWC25	99	93.447	ENSMEUG00000004156	CWC25	100	93.447	Notamacropus_eugenii
ENSSHAG00000017267	CWC25	85	66.482	ENSOPRG00000001941	CWC25	100	66.482	Ochotona_princeps
ENSSHAG00000017267	CWC25	100	74.762	ENSODEG00000017487	CWC25	100	77.990	Octodon_degus
ENSSHAG00000017267	CWC25	97	70.466	ENSOANG00000001231	-	100	70.466	Ornithorhynchus_anatinus
ENSSHAG00000017267	CWC25	100	82.588	ENSOCUG00000013906	CWC25	100	82.824	Oryctolagus_cuniculus
ENSSHAG00000017267	CWC25	60	60.996	ENSORLG00000018569	cwc25	100	51.651	Oryzias_latipes
ENSSHAG00000017267	CWC25	60	60.833	ENSORLG00020012087	cwc25	100	51.773	Oryzias_latipes_hni
ENSSHAG00000017267	CWC25	60	60.581	ENSORLG00015011062	cwc25	100	51.765	Oryzias_latipes_hsok
ENSSHAG00000017267	CWC25	100	49.289	ENSOMEG00000019365	cwc25	100	51.064	Oryzias_melastigma
ENSSHAG00000017267	CWC25	100	78.333	ENSOGAG00000008785	CWC25	100	78.333	Otolemur_garnettii
ENSSHAG00000017267	CWC25	100	84.000	ENSOARG00000009937	CWC25	100	84.235	Ovis_aries
ENSSHAG00000017267	CWC25	100	83.294	ENSPPAG00000023487	CWC25	100	84.471	Pan_paniscus
ENSSHAG00000017267	CWC25	100	84.706	ENSPPRG00000005029	CWC25	100	84.941	Panthera_pardus
ENSSHAG00000017267	CWC25	100	84.706	ENSPTIG00000020264	CWC25	100	84.941	Panthera_tigris_altaica
ENSSHAG00000017267	CWC25	100	83.294	ENSPTRG00000009077	CWC25	100	84.471	Pan_troglodytes
ENSSHAG00000017267	CWC25	100	83.294	ENSPANG00000022017	CWC25	100	83.529	Papio_anubis
ENSSHAG00000017267	CWC25	100	49.645	ENSPKIG00000007116	cwc25	100	46.462	Paramormyrops_kingsleyae
ENSSHAG00000017267	CWC25	88	72.900	ENSPSIG00000011817	CWC25	99	70.219	Pelodiscus_sinensis
ENSSHAG00000017267	CWC25	100	82.118	ENSPEMG00000000026	Cwc25	100	82.353	Peromyscus_maniculatus_bairdii
ENSSHAG00000017267	CWC25	100	94.019	ENSPCIG00000002943	CWC25	100	94.019	Phascolarctos_cinereus
ENSSHAG00000017267	CWC25	100	51.016	ENSPFOG00000017152	cwc25	100	51.389	Poecilia_formosa
ENSSHAG00000017267	CWC25	96	49.180	ENSPLAG00000004535	cwc25	100	49.519	Poecilia_latipinna
ENSSHAG00000017267	CWC25	100	51.016	ENSPMEG00000023752	cwc25	100	51.389	Poecilia_mexicana
ENSSHAG00000017267	CWC25	100	82.118	ENSPPYG00000008503	CWC25	100	83.294	Pongo_abelii
ENSSHAG00000017267	CWC25	95	80.628	ENSPCAG00000000433	CWC25	100	80.628	Procavia_capensis
ENSSHAG00000017267	CWC25	100	82.824	ENSPCOG00000023678	CWC25	100	83.059	Propithecus_coquereli
ENSSHAG00000017267	CWC25	99	84.726	ENSPVAG00000002273	CWC25	100	84.964	Pteropus_vampyrus
ENSSHAG00000017267	CWC25	100	50.577	ENSPNAG00000028668	cwc25	100	50.231	Pygocentrus_nattereri
ENSSHAG00000017267	CWC25	100	81.412	ENSRNOG00000004091	Cwc25	100	81.176	Rattus_norvegicus
ENSSHAG00000017267	CWC25	100	83.294	ENSRBIG00000033457	CWC25	100	83.529	Rhinopithecus_bieti
ENSSHAG00000017267	CWC25	100	83.529	ENSRROG00000039968	CWC25	100	83.765	Rhinopithecus_roxellana
ENSSHAG00000017267	CWC25	100	52.844	ENSSFOG00015003449	cwc25	100	52.632	Scleropages_formosus
ENSSHAG00000017267	CWC25	100	49.885	ENSSMAG00000010953	cwc25	100	50.233	Scophthalmus_maximus
ENSSHAG00000017267	CWC25	100	49.666	ENSSDUG00000004302	cwc25	100	52.064	Seriola_dumerili
ENSSHAG00000017267	CWC25	100	49.443	ENSSLDG00000005761	cwc25	100	51.835	Seriola_lalandi_dorsalis
ENSSHAG00000017267	CWC25	85	73.950	ENSSARG00000006871	CWC25	100	75.350	Sorex_araneus
ENSSHAG00000017267	CWC25	100	75.355	ENSSPUG00000018024	CWC25	100	75.355	Sphenodon_punctatus
ENSSHAG00000017267	CWC25	100	82.588	ENSSSCG00000021478	CWC25	100	82.824	Sus_scrofa
ENSSHAG00000017267	CWC25	99	64.828	ENSTGUG00000003011	CWC25	100	64.218	Taeniopygia_guttata
ENSSHAG00000017267	CWC25	100	50.577	ENSTRUG00000004650	cwc25	100	52.570	Takifugu_rubripes
ENSSHAG00000017267	CWC25	100	50.701	ENSTNIG00000014143	cwc25	100	50.708	Tetraodon_nigroviridis
ENSSHAG00000017267	CWC25	99	70.883	ENSTBEG00000013187	CWC25	100	70.883	Tupaia_belangeri
ENSSHAG00000017267	CWC25	99	82.816	ENSTTRG00000006662	CWC25	100	83.055	Tursiops_truncatus
ENSSHAG00000017267	CWC25	100	83.765	ENSUAMG00000005592	CWC25	100	84.000	Ursus_americanus
ENSSHAG00000017267	CWC25	100	83.529	ENSUMAG00000017097	CWC25	100	83.765	Ursus_maritimus
ENSSHAG00000017267	CWC25	99	74.940	ENSVPAG00000005680	CWC25	100	74.940	Vicugna_pacos
ENSSHAG00000017267	CWC25	100	84.286	ENSVVUG00000002182	CWC25	100	84.286	Vulpes_vulpes
ENSSHAG00000017267	CWC25	99	58.072	ENSXETG00000023722	cwc25	100	58.670	Xenopus_tropicalis