EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000017395 (Gene tree)
Gene ID: 100920999
Gene Symbol: CHD1L
Alias: ALC1
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 54419 bases
Position: chrGL856995.1:2691081-2745499
Accession: 1916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000020516	ResIII	PF04851.15	3.2e-11	1	1
ENSSHAP00000020516	DEAD	PF00270.29	9.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000020679	CHD1L-201	2685	-	ENSSHAP00000020516	894 (aa)	-	G3WYL1

Gene Model

Click here to download ENSSHAG00000017395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000017395's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000017395	CHD1L	50	30.785	ENSSHAG00000000110	RAD54L	67	30.785
ENSSHAG00000017395	CHD1L	50	32.943	ENSSHAG00000017038	-	55	32.943
ENSSHAG00000017395	CHD1L	62	42.683	ENSSHAG00000008464	SMARCA5	57	42.683
ENSSHAG00000017395	CHD1L	51	51.942	ENSSHAG00000014358	HELLS	64	46.875
ENSSHAG00000017395	CHD1L	61	42.907	ENSSHAG00000013518	SMARCA1	58	43.082

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000017395	CHD1L	97	77.778	ENSG00000131778	CHD1L	100	77.508	Homo_sapiens
ENSSHAG00000017395	CHD1L	94	64.252	ENSAPOG00000001539	chd1l	96	63.991	Acanthochromis_polyacanthus
ENSSHAG00000017395	CHD1L	100	76.254	ENSAMEG00000017063	CHD1L	98	77.045	Ailuropoda_melanoleuca
ENSSHAG00000017395	CHD1L	94	63.732	ENSACIG00000001164	chd1l	97	63.700	Amphilophus_citrinellus
ENSSHAG00000017395	CHD1L	95	63.850	ENSAOCG00000014510	chd1l	84	63.850	Amphiprion_ocellaris
ENSSHAG00000017395	CHD1L	94	62.264	ENSAPEG00000017573	chd1l	93	62.382	Amphiprion_percula
ENSSHAG00000017395	CHD1L	94	61.702	ENSAPEG00000017450	chd1l	93	62.057	Amphiprion_percula
ENSSHAG00000017395	CHD1L	99	62.613	ENSATEG00000013058	chd1l	93	63.164	Anabas_testudineus
ENSSHAG00000017395	CHD1L	98	71.202	ENSAPLG00000009976	CHD1L	98	71.429	Anas_platyrhynchos
ENSSHAG00000017395	CHD1L	97	66.293	ENSACAG00000017686	CHD1L	98	66.293	Anolis_carolinensis
ENSSHAG00000017395	CHD1L	97	77.880	ENSANAG00000024347	CHD1L	99	76.940	Aotus_nancymaae
ENSSHAG00000017395	CHD1L	99	62.247	ENSACLG00000019304	chd1l	97	62.159	Astatotilapia_calliptera
ENSSHAG00000017395	CHD1L	99	58.446	ENSAMXG00000012367	chd1l	86	59.447	Astyanax_mexicanus
ENSSHAG00000017395	CHD1L	99	77.018	ENSBTAG00000020831	CHD1L	99	76.596	Bos_taurus
ENSSHAG00000017395	CHD1L	99	77.001	ENSCJAG00000002406	CHD1L	97	77.803	Callithrix_jacchus
ENSSHAG00000017395	CHD1L	99	74.016	ENSCAFG00000010944	CHD1L	97	74.856	Canis_familiaris
ENSSHAG00000017395	CHD1L	99	75.670	ENSCAFG00020020121	CHD1L	97	76.337	Canis_lupus_dingo
ENSSHAG00000017395	CHD1L	99	76.742	ENSCHIG00000013871	CHD1L	98	77.055	Capra_hircus
ENSSHAG00000017395	CHD1L	95	77.960	ENSTSYG00000003005	CHD1L	100	77.608	Carlito_syrichta
ENSSHAG00000017395	CHD1L	97	74.630	ENSCPOG00000009000	CHD1L	98	74.403	Cavia_porcellus
ENSSHAG00000017395	CHD1L	99	73.483	ENSCCAG00000036079	CHD1L	99	73.401	Cebus_capucinus
ENSSHAG00000017395	CHD1L	97	78.032	ENSCATG00000031044	CHD1L	97	78.032	Cercocebus_atys
ENSSHAG00000017395	CHD1L	98	76.337	ENSCLAG00000000880	CHD1L	99	75.446	Chinchilla_lanigera
ENSSHAG00000017395	CHD1L	97	78.032	ENSCSAG00000018386	CHD1L	97	78.032	Chlorocebus_sabaeus
ENSSHAG00000017395	CHD1L	97	73.968	ENSCPBG00000002600	CHD1L	98	73.853	Chrysemys_picta_bellii
ENSSHAG00000017395	CHD1L	99	76.014	ENSCANG00000020239	CHD1L	98	76.014	Colobus_angolensis_palliatus
ENSSHAG00000017395	CHD1L	96	74.971	ENSCGRG00001021624	Chd1l	97	74.856	Cricetulus_griseus_chok1gshd
ENSSHAG00000017395	CHD1L	92	75.812	ENSCGRG00000007554	Chd1l	98	75.692	Cricetulus_griseus_crigri
ENSSHAG00000017395	CHD1L	99	61.204	ENSCVAG00000002595	chd1l	91	60.850	Cyprinodon_variegatus
ENSSHAG00000017395	CHD1L	97	64.834	ENSDARG00000015471	chd1l	86	63.708	Danio_rerio
ENSSHAG00000017395	CHD1L	99	77.095	ENSDNOG00000019504	CHD1L	98	77.588	Dasypus_novemcinctus
ENSSHAG00000017395	CHD1L	99	71.126	ENSDORG00000013555	Chd1l	97	71.932	Dipodomys_ordii
ENSSHAG00000017395	CHD1L	89	71.530	ENSETEG00000008445	CHD1L	87	72.313	Echinops_telfairi
ENSSHAG00000017395	CHD1L	68	55.405	ENSEBUG00000005791	chd1l	76	70.213	Eptatretus_burgeri
ENSSHAG00000017395	CHD1L	99	77.001	ENSEASG00005007364	CHD1L	99	78.889	Equus_asinus_asinus
ENSSHAG00000017395	CHD1L	99	77.237	ENSECAG00000008915	CHD1L	99	78.889	Equus_caballus
ENSSHAG00000017395	CHD1L	97	52.721	ENSELUG00000016844	chd1l	84	52.268	Esox_lucius
ENSSHAG00000017395	CHD1L	99	75.697	ENSFCAG00000007777	CHD1L	97	77.002	Felis_catus
ENSSHAG00000017395	CHD1L	99	69.697	ENSFALG00000006087	CHD1L	97	70.595	Ficedula_albicollis
ENSSHAG00000017395	CHD1L	94	76.841	ENSFDAG00000012431	CHD1L	98	76.960	Fukomys_damarensis
ENSSHAG00000017395	CHD1L	99	61.392	ENSFHEG00000012420	chd1l	86	62.572	Fundulus_heteroclitus
ENSSHAG00000017395	CHD1L	97	72.139	ENSGALG00000015038	CHD1L	97	71.904	Gallus_gallus
ENSSHAG00000017395	CHD1L	99	60.981	ENSGAFG00000018198	chd1l	99	59.054	Gambusia_affinis
ENSSHAG00000017395	CHD1L	57	65.354	ENSGACG00000014042	chd1l	97	65.354	Gasterosteus_aculeatus
ENSSHAG00000017395	CHD1L	97	73.295	ENSGAGG00000014432	CHD1L	99	73.179	Gopherus_agassizii
ENSSHAG00000017395	CHD1L	97	77.549	ENSGGOG00000001067	CHD1L	97	77.574	Gorilla_gorilla
ENSSHAG00000017395	CHD1L	99	62.247	ENSHBUG00000007464	chd1l	98	62.144	Haplochromis_burtoni
ENSSHAG00000017395	CHD1L	99	73.772	ENSHGLG00000008933	CHD1L	99	73.884	Heterocephalus_glaber_female
ENSSHAG00000017395	CHD1L	95	73.372	ENSHGLG00100007155	CHD1L	100	73.372	Heterocephalus_glaber_male
ENSSHAG00000017395	CHD1L	93	62.201	ENSHCOG00000012787	chd1l	92	61.842	Hippocampus_comes
ENSSHAG00000017395	CHD1L	99	59.502	ENSIPUG00000022617	chd1l	86	59.521	Ictalurus_punctatus
ENSSHAG00000017395	CHD1L	99	69.154	ENSSTOG00000007032	CHD1L	99	68.820	Ictidomys_tridecemlineatus
ENSSHAG00000017395	CHD1L	99	61.633	ENSKMAG00000014358	chd1l	86	62.471	Kryptolebias_marmoratus
ENSSHAG00000017395	CHD1L	97	61.998	ENSLBEG00000023845	chd1l	96	62.015	Labrus_bergylta
ENSSHAG00000017395	CHD1L	97	62.670	ENSLACG00000006262	CHD1L	87	62.429	Latimeria_chalumnae
ENSSHAG00000017395	CHD1L	97	67.738	ENSLOCG00000010574	chd1l	89	66.741	Lepisosteus_oculatus
ENSSHAG00000017395	CHD1L	95	76.135	ENSLAFG00000018136	CHD1L	99	76.533	Loxodonta_africana
ENSSHAG00000017395	CHD1L	96	76.566	ENSMFAG00000043562	CHD1L	100	77.872	Macaca_fascicularis
ENSSHAG00000017395	CHD1L	97	77.689	ENSMMUG00000009024	CHD1L	97	77.689	Macaca_mulatta
ENSSHAG00000017395	CHD1L	97	77.689	ENSMNEG00000039905	CHD1L	97	77.689	Macaca_nemestrina
ENSSHAG00000017395	CHD1L	97	77.918	ENSMLEG00000030900	CHD1L	97	77.918	Mandrillus_leucophaeus
ENSSHAG00000017395	CHD1L	98	61.582	ENSMAMG00000012822	chd1l	99	60.183	Mastacembelus_armatus
ENSSHAG00000017395	CHD1L	99	62.247	ENSMZEG00005020830	chd1l	88	62.557	Maylandia_zebra
ENSSHAG00000017395	CHD1L	95	71.963	ENSMGAG00000014304	CHD1L	98	72.803	Meleagris_gallopavo
ENSSHAG00000017395	CHD1L	97	77.867	ENSMICG00000002497	CHD1L	99	76.966	Microcebus_murinus
ENSSHAG00000017395	CHD1L	99	74.413	ENSMOCG00000006305	Chd1l	99	74.219	Microtus_ochrogaster
ENSSHAG00000017395	CHD1L	97	59.841	ENSMMOG00000005964	chd1l	91	59.386	Mola_mola
ENSSHAG00000017395	CHD1L	99	85.235	ENSMODG00000018717	CHD1L	100	85.235	Monodelphis_domestica
ENSSHAG00000017395	CHD1L	96	63.510	ENSMALG00000014675	chd1l	84	63.892	Monopterus_albus
ENSSHAG00000017395	CHD1L	99	75.140	MGP_CAROLIEiJ_G0025401	Chd1l	98	75.913	Mus_caroli
ENSSHAG00000017395	CHD1L	97	75.991	ENSMUSG00000028089	Chd1l	98	75.425	Mus_musculus
ENSSHAG00000017395	CHD1L	99	75.309	MGP_PahariEiJ_G0026845	Chd1l	99	75.084	Mus_pahari
ENSSHAG00000017395	CHD1L	97	76.000	MGP_SPRETEiJ_G0026347	Chd1l	98	76.000	Mus_spretus
ENSSHAG00000017395	CHD1L	99	76.517	ENSMPUG00000000615	CHD1L	97	77.320	Mustela_putorius_furo
ENSSHAG00000017395	CHD1L	99	75.503	ENSMLUG00000007573	CHD1L	98	75.307	Myotis_lucifugus
ENSSHAG00000017395	CHD1L	96	72.032	ENSNGAG00000000908	Chd1l	99	71.689	Nannospalax_galili
ENSSHAG00000017395	CHD1L	97	60.731	ENSNBRG00000006021	chd1l	95	60.502	Neolamprologus_brichardi
ENSSHAG00000017395	CHD1L	97	77.460	ENSNLEG00000000179	CHD1L	97	77.460	Nomascus_leucogenys
ENSSHAG00000017395	CHD1L	95	66.627	ENSOPRG00000006973	CHD1L	99	65.694	Ochotona_princeps
ENSSHAG00000017395	CHD1L	99	72.506	ENSODEG00000002494	CHD1L	99	72.506	Octodon_degus
ENSSHAG00000017395	CHD1L	99	62.235	ENSONIG00000003183	chd1l	89	62.785	Oreochromis_niloticus
ENSSHAG00000017395	CHD1L	86	72.114	ENSOANG00000003068	CHD1L	93	71.855	Ornithorhynchus_anatinus
ENSSHAG00000017395	CHD1L	99	71.160	ENSOCUG00000009336	CHD1L	99	70.829	Oryctolagus_cuniculus
ENSSHAG00000017395	CHD1L	97	61.009	ENSORLG00000003673	chd1l	95	61.494	Oryzias_latipes
ENSSHAG00000017395	CHD1L	97	61.530	ENSORLG00020005123	chd1l	94	63.314	Oryzias_latipes_hni
ENSSHAG00000017395	CHD1L	99	61.055	ENSORLG00015001680	chd1l	98	61.883	Oryzias_latipes_hsok
ENSSHAG00000017395	CHD1L	77	58.442	ENSOMEG00000006109	chd1l	80	60.985	Oryzias_melastigma
ENSSHAG00000017395	CHD1L	99	74.888	ENSOGAG00000008775	CHD1L	99	74.805	Otolemur_garnettii
ENSSHAG00000017395	CHD1L	99	76.802	ENSOARG00000020547	CHD1L	98	78.427	Ovis_aries
ENSSHAG00000017395	CHD1L	95	77.712	ENSPPAG00000039193	CHD1L	98	78.889	Pan_paniscus
ENSSHAG00000017395	CHD1L	99	76.143	ENSPPRG00000010258	CHD1L	97	77.090	Panthera_pardus
ENSSHAG00000017395	CHD1L	96	78.388	ENSPTRG00000001220	CHD1L	95	78.413	Pan_troglodytes
ENSSHAG00000017395	CHD1L	97	77.791	ENSPANG00000009170	CHD1L	98	77.027	Papio_anubis
ENSSHAG00000017395	CHD1L	98	62.950	ENSPKIG00000022166	chd1l	98	60.752	Paramormyrops_kingsleyae
ENSSHAG00000017395	CHD1L	99	72.799	ENSPSIG00000012595	CHD1L	97	73.280	Pelodiscus_sinensis
ENSSHAG00000017395	CHD1L	98	73.055	ENSPEMG00000013528	Chd1l	99	72.303	Peromyscus_maniculatus_bairdii
ENSSHAG00000017395	CHD1L	92	86.788	ENSPCIG00000030409	CHD1L	100	86.788	Phascolarctos_cinereus
ENSSHAG00000017395	CHD1L	99	60.992	ENSPFOG00000015948	chd1l	86	61.264	Poecilia_formosa
ENSSHAG00000017395	CHD1L	99	60.962	ENSPLAG00000015145	chd1l	98	60.341	Poecilia_latipinna
ENSSHAG00000017395	CHD1L	99	60.718	ENSPMEG00000008720	chd1l	91	60.984	Poecilia_mexicana
ENSSHAG00000017395	CHD1L	97	59.977	ENSPREG00000017885	chd1l	98	59.407	Poecilia_reticulata
ENSSHAG00000017395	CHD1L	98	77.397	ENSPPYG00000000946	CHD1L	97	77.309	Pongo_abelii
ENSSHAG00000017395	CHD1L	97	68.542	ENSPCAG00000005959	CHD1L	95	68.970	Procavia_capensis
ENSSHAG00000017395	CHD1L	94	70.720	ENSPVAG00000006084	CHD1L	99	70.918	Pteropus_vampyrus
ENSSHAG00000017395	CHD1L	97	62.486	ENSPNYG00000013001	chd1l	97	62.258	Pundamilia_nyererei
ENSSHAG00000017395	CHD1L	98	63.128	ENSPNAG00000011881	chd1l	86	63.360	Pygocentrus_nattereri
ENSSHAG00000017395	CHD1L	99	74.889	ENSRNOG00000017669	Chd1l	99	74.778	Rattus_norvegicus
ENSSHAG00000017395	CHD1L	97	76.773	ENSRBIG00000041272	CHD1L	97	76.773	Rhinopithecus_bieti
ENSSHAG00000017395	CHD1L	95	77.294	ENSRROG00000041354	CHD1L	96	77.230	Rhinopithecus_roxellana
ENSSHAG00000017395	CHD1L	97	64.686	ENSSFOG00015003649	chd1l	98	62.903	Scleropages_formosus
ENSSHAG00000017395	CHD1L	99	59.337	ENSSMAG00000019377	chd1l	96	60.069	Scophthalmus_maximus
ENSSHAG00000017395	CHD1L	94	62.441	ENSSDUG00000019831	chd1l	94	62.813	Seriola_dumerili
ENSSHAG00000017395	CHD1L	94	62.353	ENSSLDG00000012714	chd1l	94	62.692	Seriola_lalandi_dorsalis
ENSSHAG00000017395	CHD1L	99	71.685	ENSSPUG00000016865	CHD1L	98	72.592	Sphenodon_punctatus
ENSSHAG00000017395	CHD1L	95	63.775	ENSSPAG00000017653	chd1l	90	64.009	Stegastes_partitus
ENSSHAG00000017395	CHD1L	98	73.918	ENSSSCG00000006701	CHD1L	97	76.184	Sus_scrofa
ENSSHAG00000017395	CHD1L	95	72.098	ENSTGUG00000013392	-	98	72.333	Taeniopygia_guttata
ENSSHAG00000017395	CHD1L	94	57.579	ENSTNIG00000004902	chd1l	99	57.462	Tetraodon_nigroviridis
ENSSHAG00000017395	CHD1L	95	74.035	ENSTTRG00000011711	CHD1L	100	73.715	Tursiops_truncatus
ENSSHAG00000017395	CHD1L	100	75.808	ENSUAMG00000021991	CHD1L	98	76.477	Ursus_americanus
ENSSHAG00000017395	CHD1L	100	75.585	ENSUMAG00000009733	CHD1L	98	76.217	Ursus_maritimus
ENSSHAG00000017395	CHD1L	100	75.893	ENSVVUG00000007316	CHD1L	93	76.765	Vulpes_vulpes
ENSSHAG00000017395	CHD1L	97	60.345	ENSXCOG00000008336	chd1l	84	60.400	Xiphophorus_couchianus
ENSSHAG00000017395	CHD1L	99	61.461	ENSXMAG00000015898	chd1l	96	57.888	Xiphophorus_maculatus