EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000017436 (Gene tree)
Gene ID: 100917730
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 21709 bases
Position: chrGL834624.1:2719141-2740849
Accession: 100917730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000020561	Exo_endo_phos	PF03372.23	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000020725	CNOT6-201	1745	-	ENSSHAP00000020561	557 (aa)	XP_023362525	G3WYQ6

Gene Model

Click here to download ENSSHAG00000017436's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000017436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000017436	CNOT6	100	78.815	ENSSHAG00000006072	CNOT6L	99	78.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000017436	CNOT6	100	95.691	ENSG00000113300	CNOT6	100	97.368	Homo_sapiens
ENSSHAG00000017436	CNOT6	100	87.299	ENSAPOG00000009994	cnot6b	100	86.941	Acanthochromis_polyacanthus
ENSSHAG00000017436	CNOT6	100	96.243	ENSAMEG00000000949	CNOT6	99	96.243	Ailuropoda_melanoleuca
ENSSHAG00000017436	CNOT6	100	86.583	ENSACIG00000016566	cnot6b	100	86.225	Amphilophus_citrinellus
ENSSHAG00000017436	CNOT6	100	87.299	ENSAOCG00000006893	cnot6b	100	86.941	Amphiprion_ocellaris
ENSSHAG00000017436	CNOT6	100	87.299	ENSAPEG00000016949	cnot6b	100	86.941	Amphiprion_percula
ENSSHAG00000017436	CNOT6	100	85.510	ENSATEG00000007862	cnot6b	100	85.152	Anabas_testudineus
ENSSHAG00000017436	CNOT6	100	97.127	ENSAPLG00000012715	CNOT6	99	97.127	Anas_platyrhynchos
ENSSHAG00000017436	CNOT6	100	94.434	ENSACAG00000016548	CNOT6	100	94.434	Anolis_carolinensis
ENSSHAG00000017436	CNOT6	100	95.871	ENSANAG00000030436	CNOT6	96	95.871	Aotus_nancymaae
ENSSHAG00000017436	CNOT6	100	85.510	ENSACLG00000008279	cnot6b	100	86.047	Astatotilapia_calliptera
ENSSHAG00000017436	CNOT6	100	85.663	ENSAMXG00000034694	cnot6b	100	85.663	Astyanax_mexicanus
ENSSHAG00000017436	CNOT6	100	87.276	ENSAMXG00000019140	cnot6a	100	87.276	Astyanax_mexicanus
ENSSHAG00000017436	CNOT6	100	96.409	ENSBTAG00000017362	CNOT6	100	96.409	Bos_taurus
ENSSHAG00000017436	CNOT6	100	95.691	ENSCJAG00000009795	CNOT6	100	95.691	Callithrix_jacchus
ENSSHAG00000017436	CNOT6	100	96.409	ENSCAFG00000000464	CNOT6	100	96.409	Canis_familiaris
ENSSHAG00000017436	CNOT6	100	96.409	ENSCAFG00020002441	CNOT6	100	96.409	Canis_lupus_dingo
ENSSHAG00000017436	CNOT6	100	96.050	ENSCHIG00000019100	CNOT6	100	96.050	Capra_hircus
ENSSHAG00000017436	CNOT6	100	94.255	ENSTSYG00000003982	CNOT6	100	94.255	Carlito_syrichta
ENSSHAG00000017436	CNOT6	100	90.664	ENSCPOG00000035657	CNOT6	100	90.664	Cavia_porcellus
ENSSHAG00000017436	CNOT6	100	91.203	ENSCCAG00000033670	CNOT6	100	91.203	Cebus_capucinus
ENSSHAG00000017436	CNOT6	100	95.691	ENSCATG00000042014	CNOT6	100	95.691	Cercocebus_atys
ENSSHAG00000017436	CNOT6	100	94.075	ENSCLAG00000010489	CNOT6	100	94.075	Chinchilla_lanigera
ENSSHAG00000017436	CNOT6	100	95.691	ENSCSAG00000008165	CNOT6	100	95.691	Chlorocebus_sabaeus
ENSSHAG00000017436	CNOT6	100	95.512	ENSCHOG00000009680	CNOT6	100	95.512	Choloepus_hoffmanni
ENSSHAG00000017436	CNOT6	100	96.589	ENSCPBG00000008908	CNOT6	100	96.589	Chrysemys_picta_bellii
ENSSHAG00000017436	CNOT6	100	95.871	ENSCANG00000026756	CNOT6	100	95.871	Colobus_angolensis_palliatus
ENSSHAG00000017436	CNOT6	100	94.614	ENSCGRG00001011452	Cnot6	100	94.614	Cricetulus_griseus_chok1gshd
ENSSHAG00000017436	CNOT6	100	92.460	ENSCGRG00000010407	Cnot6	100	92.460	Cricetulus_griseus_crigri
ENSSHAG00000017436	CNOT6	100	86.762	ENSCSEG00000010939	cnot6b	100	86.404	Cynoglossus_semilaevis
ENSSHAG00000017436	CNOT6	100	85.842	ENSCVAG00000010538	cnot6b	100	85.484	Cyprinodon_variegatus
ENSSHAG00000017436	CNOT6	100	87.097	ENSDARG00000008255	cnot6a	100	87.097	Danio_rerio
ENSSHAG00000017436	CNOT6	100	84.409	ENSDARG00000101072	cnot6b	100	84.409	Danio_rerio
ENSSHAG00000017436	CNOT6	100	96.589	ENSDNOG00000041644	CNOT6	100	96.589	Dasypus_novemcinctus
ENSSHAG00000017436	CNOT6	100	84.919	ENSDORG00000001708	Cnot6	100	84.919	Dipodomys_ordii
ENSSHAG00000017436	CNOT6	100	76.744	ENSETEG00000006975	CNOT6	100	76.744	Echinops_telfairi
ENSSHAG00000017436	CNOT6	100	95.512	ENSEASG00005012794	-	100	95.512	Equus_asinus_asinus
ENSSHAG00000017436	CNOT6	90	90.400	ENSEASG00005012957	-	99	90.400	Equus_asinus_asinus
ENSSHAG00000017436	CNOT6	100	96.230	ENSECAG00000019325	CNOT6	100	96.230	Equus_caballus
ENSSHAG00000017436	CNOT6	100	90.126	ENSECAG00000012704	-	99	90.126	Equus_caballus
ENSSHAG00000017436	CNOT6	100	94.973	ENSEEUG00000015382	CNOT6	100	94.973	Erinaceus_europaeus
ENSSHAG00000017436	CNOT6	100	83.774	ENSELUG00000015981	cnot6b	99	83.069	Esox_lucius
ENSSHAG00000017436	CNOT6	100	83.333	ENSELUG00000024580	cnot6a	100	83.333	Esox_lucius
ENSSHAG00000017436	CNOT6	100	96.409	ENSFCAG00000001881	CNOT6	100	96.409	Felis_catus
ENSSHAG00000017436	CNOT6	100	97.487	ENSFALG00000007699	CNOT6	100	97.487	Ficedula_albicollis
ENSSHAG00000017436	CNOT6	100	94.075	ENSFDAG00000001999	CNOT6	100	94.075	Fukomys_damarensis
ENSSHAG00000017436	CNOT6	65	90.476	ENSFHEG00000013756	cnot6b	94	94.872	Fundulus_heteroclitus
ENSSHAG00000017436	CNOT6	95	85.633	ENSGMOG00000009767	cnot6b	99	85.633	Gadus_morhua
ENSSHAG00000017436	CNOT6	100	97.487	ENSGALG00000034316	CNOT6	100	97.487	Gallus_gallus
ENSSHAG00000017436	CNOT6	100	85.663	ENSGAFG00000008525	cnot6b	100	85.305	Gambusia_affinis
ENSSHAG00000017436	CNOT6	95	83.932	ENSGACG00000018046	cnot6b	99	83.932	Gasterosteus_aculeatus
ENSSHAG00000017436	CNOT6	100	80.251	ENSGAGG00000012176	CNOT6	100	80.251	Gopherus_agassizii
ENSSHAG00000017436	CNOT6	100	95.691	ENSGGOG00000003675	CNOT6	100	95.691	Gorilla_gorilla
ENSSHAG00000017436	CNOT6	100	85.689	ENSHBUG00000002819	cnot6b	100	86.225	Haplochromis_burtoni
ENSSHAG00000017436	CNOT6	100	94.255	ENSHGLG00000017756	CNOT6	100	94.255	Heterocephalus_glaber_female
ENSSHAG00000017436	CNOT6	100	94.255	ENSHGLG00100005747	CNOT6	100	94.255	Heterocephalus_glaber_male
ENSSHAG00000017436	CNOT6	100	84.258	ENSHCOG00000016176	cnot6b	100	84.794	Hippocampus_comes
ENSSHAG00000017436	CNOT6	100	86.201	ENSIPUG00000019831	cnot6a	100	86.201	Ictalurus_punctatus
ENSSHAG00000017436	CNOT6	100	84.946	ENSIPUG00000017482	cnot6b	100	84.946	Ictalurus_punctatus
ENSSHAG00000017436	CNOT6	100	96.589	ENSSTOG00000002803	CNOT6	100	96.589	Ictidomys_tridecemlineatus
ENSSHAG00000017436	CNOT6	100	94.434	ENSJJAG00000012296	Cnot6	100	94.434	Jaculus_jaculus
ENSSHAG00000017436	CNOT6	100	86.559	ENSKMAG00000004640	cnot6b	100	86.201	Kryptolebias_marmoratus
ENSSHAG00000017436	CNOT6	100	84.258	ENSLBEG00000027917	cnot6b	100	84.794	Labrus_bergylta
ENSSHAG00000017436	CNOT6	100	90.860	ENSLOCG00000010102	cnot6b	99	90.860	Lepisosteus_oculatus
ENSSHAG00000017436	CNOT6	100	96.768	ENSLAFG00000016742	CNOT6	100	96.768	Loxodonta_africana
ENSSHAG00000017436	CNOT6	100	95.691	ENSMFAG00000030867	CNOT6	100	95.691	Macaca_fascicularis
ENSSHAG00000017436	CNOT6	100	95.691	ENSMMUG00000018690	CNOT6	100	95.691	Macaca_mulatta
ENSSHAG00000017436	CNOT6	100	95.691	ENSMNEG00000038565	CNOT6	100	95.691	Macaca_nemestrina
ENSSHAG00000017436	CNOT6	100	95.691	ENSMLEG00000010555	CNOT6	100	95.691	Mandrillus_leucophaeus
ENSSHAG00000017436	CNOT6	100	87.478	ENSMAMG00000007515	cnot6b	100	87.120	Mastacembelus_armatus
ENSSHAG00000017436	CNOT6	100	85.510	ENSMZEG00005012899	cnot6b	100	86.047	Maylandia_zebra
ENSSHAG00000017436	CNOT6	100	95.153	ENSMAUG00000019798	Cnot6	100	95.153	Mesocricetus_auratus
ENSSHAG00000017436	CNOT6	100	94.075	ENSMICG00000013018	-	100	94.075	Microcebus_murinus
ENSSHAG00000017436	CNOT6	98	85.478	ENSMICG00000028378	-	99	85.478	Microcebus_murinus
ENSSHAG00000017436	CNOT6	100	94.973	ENSMOCG00000021662	Cnot6	100	94.973	Microtus_ochrogaster
ENSSHAG00000017436	CNOT6	100	84.588	ENSMMOG00000003227	cnot6b	100	84.588	Mola_mola
ENSSHAG00000017436	CNOT6	100	99.820	ENSMODG00000003979	CNOT6	100	99.820	Monodelphis_domestica
ENSSHAG00000017436	CNOT6	100	87.478	ENSMALG00000014251	cnot6b	100	87.120	Monopterus_albus
ENSSHAG00000017436	CNOT6	100	95.153	MGP_CAROLIEiJ_G0016277	Cnot6	100	95.153	Mus_caroli
ENSSHAG00000017436	CNOT6	100	95.153	ENSMUSG00000020362	Cnot6	100	95.153	Mus_musculus
ENSSHAG00000017436	CNOT6	100	95.153	MGP_PahariEiJ_G0017413	Cnot6	100	95.153	Mus_pahari
ENSSHAG00000017436	CNOT6	100	94.973	MGP_SPRETEiJ_G0017122	Cnot6	100	94.973	Mus_spretus
ENSSHAG00000017436	CNOT6	100	96.230	ENSMPUG00000000587	CNOT6	96	96.230	Mustela_putorius_furo
ENSSHAG00000017436	CNOT6	100	94.306	ENSMLUG00000010257	CNOT6	100	94.306	Myotis_lucifugus
ENSSHAG00000017436	CNOT6	100	93.896	ENSNGAG00000008269	Cnot6	100	93.896	Nannospalax_galili
ENSSHAG00000017436	CNOT6	100	85.689	ENSNBRG00000010798	cnot6b	100	86.225	Neolamprologus_brichardi
ENSSHAG00000017436	CNOT6	100	95.332	ENSNLEG00000002322	CNOT6	100	95.332	Nomascus_leucogenys
ENSSHAG00000017436	CNOT6	81	99.533	ENSMEUG00000000025	CNOT6	81	99.533	Notamacropus_eugenii
ENSSHAG00000017436	CNOT6	88	94.511	ENSOPRG00000008244	-	88	94.511	Ochotona_princeps
ENSSHAG00000017436	CNOT6	100	93.178	ENSODEG00000007041	CNOT6	100	93.178	Octodon_degus
ENSSHAG00000017436	CNOT6	75	85.816	ENSONIG00000013027	cnot6b	99	85.816	Oreochromis_niloticus
ENSSHAG00000017436	CNOT6	100	95.332	ENSOANG00000010226	CNOT6	100	95.332	Ornithorhynchus_anatinus
ENSSHAG00000017436	CNOT6	100	95.170	ENSOCUG00000011083	CNOT6	100	95.170	Oryctolagus_cuniculus
ENSSHAG00000017436	CNOT6	100	85.331	ENSORLG00000005059	cnot6b	100	84.973	Oryzias_latipes
ENSSHAG00000017436	CNOT6	100	85.331	ENSORLG00020012784	cnot6b	100	84.973	Oryzias_latipes_hni
ENSSHAG00000017436	CNOT6	94	84.321	ENSORLG00015022658	cnot6b	98	83.939	Oryzias_latipes_hsok
ENSSHAG00000017436	CNOT6	100	85.868	ENSOMEG00000005295	cnot6b	100	85.510	Oryzias_melastigma
ENSSHAG00000017436	CNOT6	94	95.420	ENSOGAG00000032470	CNOT6	100	95.420	Otolemur_garnettii
ENSSHAG00000017436	CNOT6	97	95.941	ENSOARG00000001003	CNOT6	100	95.941	Ovis_aries
ENSSHAG00000017436	CNOT6	100	95.691	ENSPPAG00000032253	CNOT6	100	95.691	Pan_paniscus
ENSSHAG00000017436	CNOT6	100	96.230	ENSPPRG00000011912	CNOT6	100	96.230	Panthera_pardus
ENSSHAG00000017436	CNOT6	100	96.230	ENSPTIG00000016794	CNOT6	100	96.230	Panthera_tigris_altaica
ENSSHAG00000017436	CNOT6	100	95.691	ENSPTRG00000017636	CNOT6	100	95.691	Pan_troglodytes
ENSSHAG00000017436	CNOT6	100	95.691	ENSPANG00000016191	CNOT6	100	95.691	Papio_anubis
ENSSHAG00000017436	CNOT6	100	87.814	ENSPKIG00000021368	cnot6b	100	87.814	Paramormyrops_kingsleyae
ENSSHAG00000017436	CNOT6	98	96.875	ENSPSIG00000017307	CNOT6	100	96.875	Pelodiscus_sinensis
ENSSHAG00000017436	CNOT6	100	86.404	ENSPMGG00000011238	cnot6b	100	86.047	Periophthalmus_magnuspinnatus
ENSSHAG00000017436	CNOT6	100	93.896	ENSPEMG00000000627	Cnot6	100	93.896	Peromyscus_maniculatus_bairdii
ENSSHAG00000017436	CNOT6	100	99.641	ENSPCIG00000020319	CNOT6	99	99.641	Phascolarctos_cinereus
ENSSHAG00000017436	CNOT6	100	85.842	ENSPFOG00000006291	cnot6b	100	85.484	Poecilia_formosa
ENSSHAG00000017436	CNOT6	100	82.796	ENSPLAG00000008266	cnot6b	100	82.437	Poecilia_latipinna
ENSSHAG00000017436	CNOT6	100	86.022	ENSPMEG00000009091	cnot6b	100	85.663	Poecilia_mexicana
ENSSHAG00000017436	CNOT6	100	85.305	ENSPREG00000003713	cnot6b	100	84.946	Poecilia_reticulata
ENSSHAG00000017436	CNOT6	100	95.691	ENSPPYG00000016137	CNOT6	100	95.691	Pongo_abelii
ENSSHAG00000017436	CNOT6	71	96.617	ENSPCAG00000005599	-	71	96.617	Procavia_capensis
ENSSHAG00000017436	CNOT6	100	90.305	ENSPCOG00000017359	CNOT6	100	91.023	Propithecus_coquereli
ENSSHAG00000017436	CNOT6	100	91.203	ENSPVAG00000003069	CNOT6	100	91.203	Pteropus_vampyrus
ENSSHAG00000017436	CNOT6	100	85.331	ENSPNYG00000000321	cnot6b	100	85.868	Pundamilia_nyererei
ENSSHAG00000017436	CNOT6	100	87.097	ENSPNAG00000029586	cnot6a	100	87.097	Pygocentrus_nattereri
ENSSHAG00000017436	CNOT6	100	86.022	ENSPNAG00000028816	cnot6b	100	86.022	Pygocentrus_nattereri
ENSSHAG00000017436	CNOT6	100	94.255	ENSRNOG00000054891	Cnot6	100	94.255	Rattus_norvegicus
ENSSHAG00000017436	CNOT6	100	95.512	ENSRBIG00000004309	CNOT6	100	95.512	Rhinopithecus_bieti
ENSSHAG00000017436	CNOT6	100	95.512	ENSRROG00000035378	CNOT6	100	95.671	Rhinopithecus_roxellana
ENSSHAG00000017436	CNOT6	100	95.691	ENSSBOG00000030494	CNOT6	100	95.691	Saimiri_boliviensis_boliviensis
ENSSHAG00000017436	CNOT6	100	86.738	ENSSFOG00015022383	cnot6a	96	86.738	Scleropages_formosus
ENSSHAG00000017436	CNOT6	100	88.889	ENSSFOG00015015133	CNOT6	100	88.889	Scleropages_formosus
ENSSHAG00000017436	CNOT6	100	85.331	ENSSMAG00000003084	cnot6b	100	84.973	Scophthalmus_maximus
ENSSHAG00000017436	CNOT6	100	86.941	ENSSDUG00000004151	cnot6b	100	86.583	Seriola_dumerili
ENSSHAG00000017436	CNOT6	100	86.047	ENSSLDG00000004448	cnot6b	100	86.583	Seriola_lalandi_dorsalis
ENSSHAG00000017436	CNOT6	64	76.257	ENSSARG00000012650	-	100	76.257	Sorex_araneus
ENSSHAG00000017436	CNOT6	100	96.230	ENSSPUG00000007893	CNOT6	100	96.230	Sphenodon_punctatus
ENSSHAG00000017436	CNOT6	100	87.120	ENSSPAG00000000149	cnot6b	100	86.762	Stegastes_partitus
ENSSHAG00000017436	CNOT6	100	95.871	ENSSSCG00000014009	CNOT6	100	96.104	Sus_scrofa
ENSSHAG00000017436	CNOT6	100	97.127	ENSTGUG00000001119	CNOT6	100	97.127	Taeniopygia_guttata
ENSSHAG00000017436	CNOT6	100	84.201	ENSTRUG00000002818	cnot6b	100	84.201	Takifugu_rubripes
ENSSHAG00000017436	CNOT6	100	84.560	ENSTNIG00000004443	cnot6b	99	84.560	Tetraodon_nigroviridis
ENSSHAG00000017436	CNOT6	87	66.735	ENSTBEG00000017094	-	100	66.735	Tupaia_belangeri
ENSSHAG00000017436	CNOT6	100	96.050	ENSTTRG00000009363	CNOT6	100	96.050	Tursiops_truncatus
ENSSHAG00000017436	CNOT6	77	96.270	ENSUAMG00000004579	CNOT6	88	96.270	Ursus_americanus
ENSSHAG00000017436	CNOT6	100	92.123	ENSUMAG00000024577	CNOT6	100	92.123	Ursus_maritimus
ENSSHAG00000017436	CNOT6	83	94.626	ENSVPAG00000003593	CNOT6	83	94.626	Vicugna_pacos
ENSSHAG00000017436	CNOT6	100	96.409	ENSVVUG00000026940	CNOT6	100	96.409	Vulpes_vulpes
ENSSHAG00000017436	CNOT6	100	83.154	ENSXCOG00000003360	cnot6b	100	82.796	Xiphophorus_couchianus
ENSSHAG00000017436	CNOT6	100	86.022	ENSXMAG00000008730	cnot6b	100	85.663	Xiphophorus_maculatus