EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000017576 (Gene tree)
Gene ID: 100915626
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 138859 bases
Position: chrGL864851.1:2818514-2957372
Accession: 100915626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000020724	RRM_1	PF00076.22	3.9e-39	1	3
ENSSHAP00000020724	RRM_1	PF00076.22	3.9e-39	2	3
ENSSHAP00000020724	RRM_1	PF00076.22	3.9e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000020890	RBM47-201	2235	-	ENSSHAP00000020724	590 (aa)	XP_003773344	G3WZ69

Gene Model

Click here to download ENSSHAG00000017576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000017576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000017576	RBM47	52	54.167	ENSSHAG00000015863	SYNCRIP	69	47.126
ENSSHAG00000017576	RBM47	73	58.000	ENSSHAG00000005096	A1CF	75	59.508
ENSSHAG00000017576	RBM47	51	74.333	ENSSHAG00000012596	RBM46	56	74.333
ENSSHAG00000017576	RBM47	52	55.769	ENSSHAG00000010091	HNRNPR	53	55.949

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000017576	RBM47	100	91.414	ENSG00000163694	RBM47	100	94.009	Homo_sapiens
ENSSHAG00000017576	RBM47	100	82.097	ENSAPOG00000011062	rbm47	100	82.097	Acanthochromis_polyacanthus
ENSSHAG00000017576	RBM47	100	90.604	ENSAMEG00000009672	RBM47	100	91.107	Ailuropoda_melanoleuca
ENSSHAG00000017576	RBM47	100	77.889	ENSACIG00000011531	rbm47	100	77.889	Amphilophus_citrinellus
ENSSHAG00000017576	RBM47	100	82.097	ENSAOCG00000022245	rbm47	100	82.097	Amphiprion_ocellaris
ENSSHAG00000017576	RBM47	100	82.097	ENSAPEG00000018304	rbm47	100	82.097	Amphiprion_percula
ENSSHAG00000017576	RBM47	100	78.325	ENSATEG00000018400	rbm47	100	77.176	Anabas_testudineus
ENSSHAG00000017576	RBM47	100	88.215	ENSAPLG00000013974	RBM47	100	88.533	Anas_platyrhynchos
ENSSHAG00000017576	RBM47	100	87.500	ENSACAG00000011833	RBM47	100	87.333	Anolis_carolinensis
ENSSHAG00000017576	RBM47	100	91.751	ENSANAG00000029440	RBM47	100	91.751	Aotus_nancymaae
ENSSHAG00000017576	RBM47	100	82.946	ENSACLG00000016902	rbm47	100	82.946	Astatotilapia_calliptera
ENSSHAG00000017576	RBM47	100	76.847	ENSAMXG00000021794	rbm47	100	76.645	Astyanax_mexicanus
ENSSHAG00000017576	RBM47	100	92.047	ENSBTAG00000002356	RBM47	100	92.893	Bos_taurus
ENSSHAG00000017576	RBM47	100	91.525	ENSCJAG00000019385	RBM47	100	92.533	Callithrix_jacchus
ENSSHAG00000017576	RBM47	96	91.213	ENSCAFG00000015898	RBM47	100	89.882	Canis_familiaris
ENSSHAG00000017576	RBM47	83	92.041	ENSCAFG00020010558	RBM47	94	89.655	Canis_lupus_dingo
ENSSHAG00000017576	RBM47	100	92.217	ENSCHIG00000026214	RBM47	100	93.063	Capra_hircus
ENSSHAG00000017576	RBM47	86	87.611	ENSTSYG00000033612	RBM47	93	87.611	Carlito_syrichta
ENSSHAG00000017576	RBM47	100	83.784	ENSCAPG00000008426	RBM47	100	85.135	Cavia_aperea
ENSSHAG00000017576	RBM47	100	90.203	ENSCPOG00000014100	RBM47	100	91.733	Cavia_porcellus
ENSSHAG00000017576	RBM47	100	91.864	ENSCCAG00000030129	-	100	93.067	Cebus_capucinus
ENSSHAG00000017576	RBM47	99	63.238	ENSCCAG00000024397	-	99	63.069	Cebus_capucinus
ENSSHAG00000017576	RBM47	100	91.864	ENSCATG00000042064	RBM47	100	93.067	Cercocebus_atys
ENSSHAG00000017576	RBM47	100	90.863	ENSCLAG00000001684	RBM47	100	91.733	Chinchilla_lanigera
ENSSHAG00000017576	RBM47	100	91.582	ENSCSAG00000017060	RBM47	100	91.919	Chlorocebus_sabaeus
ENSSHAG00000017576	RBM47	88	87.342	ENSCHOG00000011731	RBM47	88	87.342	Choloepus_hoffmanni
ENSSHAG00000017576	RBM47	100	92.965	ENSCPBG00000013831	RBM47	100	92.630	Chrysemys_picta_bellii
ENSSHAG00000017576	RBM47	100	92.203	ENSCANG00000019997	RBM47	100	93.067	Colobus_angolensis_palliatus
ENSSHAG00000017576	RBM47	100	62.748	ENSCGRG00001020102	-	100	68.074	Cricetulus_griseus_chok1gshd
ENSSHAG00000017576	RBM47	100	89.262	ENSCGRG00001000623	-	100	89.094	Cricetulus_griseus_chok1gshd
ENSSHAG00000017576	RBM47	100	88.423	ENSCGRG00000007762	-	100	89.873	Cricetulus_griseus_crigri
ENSSHAG00000017576	RBM47	100	62.417	ENSCGRG00000014760	-	100	86.508	Cricetulus_griseus_crigri
ENSSHAG00000017576	RBM47	100	75.879	ENSCSEG00000004545	rbm47	100	76.294	Cynoglossus_semilaevis
ENSSHAG00000017576	RBM47	96	86.441	ENSCVAG00000020144	rbm47	100	82.353	Cyprinodon_variegatus
ENSSHAG00000017576	RBM47	100	77.595	ENSDARG00000061985	rbm47	100	76.733	Danio_rerio
ENSSHAG00000017576	RBM47	100	90.863	ENSDNOG00000046854	RBM47	100	91.032	Dasypus_novemcinctus
ENSSHAG00000017576	RBM47	100	90.955	ENSDORG00000010144	Rbm47	100	91.122	Dipodomys_ordii
ENSSHAG00000017576	RBM47	100	90.436	ENSETEG00000009194	RBM47	100	90.604	Echinops_telfairi
ENSSHAG00000017576	RBM47	99	58.706	ENSEBUG00000011912	rbm47	91	61.818	Eptatretus_burgeri
ENSSHAG00000017576	RBM47	100	92.893	ENSEASG00005008443	RBM47	100	92.893	Equus_asinus_asinus
ENSSHAG00000017576	RBM47	100	92.893	ENSECAG00000004400	RBM47	100	92.893	Equus_caballus
ENSSHAG00000017576	RBM47	75	91.775	ENSEEUG00000001194	RBM47	75	91.775	Erinaceus_europaeus
ENSSHAG00000017576	RBM47	100	74.797	ENSELUG00000006148	rbm47	100	81.864	Esox_lucius
ENSSHAG00000017576	RBM47	100	92.203	ENSFCAG00000012399	RBM47	100	92.034	Felis_catus
ENSSHAG00000017576	RBM47	100	90.604	ENSFALG00000002861	RBM47	100	91.443	Ficedula_albicollis
ENSSHAG00000017576	RBM47	100	89.679	ENSFDAG00000016326	RBM47	100	89.171	Fukomys_damarensis
ENSSHAG00000017576	RBM47	100	77.983	ENSFHEG00000007938	rbm47	100	76.807	Fundulus_heteroclitus
ENSSHAG00000017576	RBM47	100	75.122	ENSGMOG00000014802	rbm47	100	75.285	Gadus_morhua
ENSSHAG00000017576	RBM47	64	92.573	ENSGALG00000014267	RBM47	99	93.899	Gallus_gallus
ENSSHAG00000017576	RBM47	64	84.267	ENSGAFG00000020571	rbm47	98	84.267	Gambusia_affinis
ENSSHAG00000017576	RBM47	100	74.020	ENSGACG00000016223	rbm47	100	80.102	Gasterosteus_aculeatus
ENSSHAG00000017576	RBM47	100	92.965	ENSGAGG00000020051	RBM47	100	92.630	Gopherus_agassizii
ENSSHAG00000017576	RBM47	100	91.864	ENSGGOG00000001367	RBM47	100	93.067	Gorilla_gorilla
ENSSHAG00000017576	RBM47	100	82.946	ENSHBUG00000003520	rbm47	100	82.946	Haplochromis_burtoni
ENSSHAG00000017576	RBM47	84	85.366	ENSHGLG00000016914	RBM47	100	90.506	Heterocephalus_glaber_female
ENSSHAG00000017576	RBM47	100	90.169	ENSHGLG00100014028	-	100	90.506	Heterocephalus_glaber_male
ENSSHAG00000017576	RBM47	100	81.356	ENSHGLG00100003071	-	100	81.186	Heterocephalus_glaber_male
ENSSHAG00000017576	RBM47	99	82.609	ENSHCOG00000002074	rbm47	99	82.609	Hippocampus_comes
ENSSHAG00000017576	RBM47	100	80.135	ENSIPUG00000004743	rbm47	100	79.966	Ictalurus_punctatus
ENSSHAG00000017576	RBM47	100	90.924	ENSSTOG00000004727	RBM47	100	90.924	Ictidomys_tridecemlineatus
ENSSHAG00000017576	RBM47	100	89.262	ENSJJAG00000013823	Rbm47	100	89.933	Jaculus_jaculus
ENSSHAG00000017576	RBM47	100	81.633	ENSKMAG00000000084	rbm47	100	81.888	Kryptolebias_marmoratus
ENSSHAG00000017576	RBM47	100	81.122	ENSLBEG00000008436	rbm47	100	81.122	Labrus_bergylta
ENSSHAG00000017576	RBM47	100	86.532	ENSLACG00000007196	RBM47	100	85.859	Latimeria_chalumnae
ENSSHAG00000017576	RBM47	100	85.017	ENSLOCG00000012966	rbm47	95	84.175	Lepisosteus_oculatus
ENSSHAG00000017576	RBM47	100	91.751	ENSLAFG00000011998	RBM47	100	91.246	Loxodonta_africana
ENSSHAG00000017576	RBM47	100	91.864	ENSMFAG00000037967	RBM47	100	93.067	Macaca_fascicularis
ENSSHAG00000017576	RBM47	100	91.582	ENSMMUG00000012036	RBM47	100	93.264	Macaca_mulatta
ENSSHAG00000017576	RBM47	100	92.203	ENSMNEG00000040774	RBM47	100	93.067	Macaca_nemestrina
ENSSHAG00000017576	RBM47	100	94.921	ENSMLEG00000041432	RBM47	100	94.921	Mandrillus_leucophaeus
ENSSHAG00000017576	RBM47	100	77.303	ENSMAMG00000019143	rbm47	100	80.147	Mastacembelus_armatus
ENSSHAG00000017576	RBM47	100	76.721	ENSMZEG00005023659	rbm47	100	76.557	Maylandia_zebra
ENSSHAG00000017576	RBM47	100	90.317	ENSMGAG00000012226	RBM47	100	90.651	Meleagris_gallopavo
ENSSHAG00000017576	RBM47	100	89.580	ENSMAUG00000006493	Rbm47	100	91.247	Mesocricetus_auratus
ENSSHAG00000017576	RBM47	100	86.102	ENSMICG00000026417	RBM47	100	87.162	Microcebus_murinus
ENSSHAG00000017576	RBM47	100	90.236	ENSMOCG00000021170	Rbm47	100	92.021	Microtus_ochrogaster
ENSSHAG00000017576	RBM47	100	77.833	ENSMMOG00000007260	rbm47	100	77.340	Mola_mola
ENSSHAG00000017576	RBM47	100	96.115	ENSMODG00000007003	RBM47	100	96.115	Monodelphis_domestica
ENSSHAG00000017576	RBM47	100	85.085	ENSMODG00000020561	-	100	85.254	Monodelphis_domestica
ENSSHAG00000017576	RBM47	53	84.810	ENSMODG00000015426	-	100	83.489	Monodelphis_domestica
ENSSHAG00000017576	RBM47	100	80.720	ENSMALG00000005167	rbm47	100	81.491	Monopterus_albus
ENSSHAG00000017576	RBM47	100	89.882	MGP_CAROLIEiJ_G0027258	Rbm47	100	90.691	Mus_caroli
ENSSHAG00000017576	RBM47	100	89.882	ENSMUSG00000070780	Rbm47	100	90.957	Mus_musculus
ENSSHAG00000017576	RBM47	100	89.882	MGP_PahariEiJ_G0017040	Rbm47	100	90.957	Mus_pahari
ENSSHAG00000017576	RBM47	100	89.848	MGP_SPRETEiJ_G0028253	Rbm47	100	90.186	Mus_spretus
ENSSHAG00000017576	RBM47	100	91.400	ENSMPUG00000006177	RBM47	94	91.737	Mustela_putorius_furo
ENSSHAG00000017576	RBM47	100	89.189	ENSMLUG00000000889	RBM47	100	90.203	Myotis_lucifugus
ENSSHAG00000017576	RBM47	100	89.580	ENSNGAG00000003325	Rbm47	100	90.084	Nannospalax_galili
ENSSHAG00000017576	RBM47	100	76.596	ENSNBRG00000015092	rbm47	100	76.596	Neolamprologus_brichardi
ENSSHAG00000017576	RBM47	100	91.525	ENSNLEG00000017151	RBM47	100	93.067	Nomascus_leucogenys
ENSSHAG00000017576	RBM47	73	92.075	ENSMEUG00000009516	-	100	92.075	Notamacropus_eugenii
ENSSHAG00000017576	RBM47	75	92.531	ENSOPRG00000016507	-	75	92.531	Ochotona_princeps
ENSSHAG00000017576	RBM47	100	91.032	ENSODEG00000004873	RBM47	100	91.371	Octodon_degus
ENSSHAG00000017576	RBM47	100	76.721	ENSONIG00000009061	rbm47	100	76.066	Oreochromis_niloticus
ENSSHAG00000017576	RBM47	100	88.610	ENSOANG00000008978	RBM47	100	89.615	Ornithorhynchus_anatinus
ENSSHAG00000017576	RBM47	100	92.047	ENSOCUG00000012034	RBM47	100	92.047	Oryctolagus_cuniculus
ENSSHAG00000017576	RBM47	100	82.821	ENSORLG00000005847	rbm47	100	82.821	Oryzias_latipes
ENSSHAG00000017576	RBM47	100	82.821	ENSORLG00020005154	rbm47	100	82.821	Oryzias_latipes_hni
ENSSHAG00000017576	RBM47	100	83.077	ENSORLG00015000066	rbm47	100	83.077	Oryzias_latipes_hsok
ENSSHAG00000017576	RBM47	100	79.832	ENSOMEG00000010730	rbm47	100	78.992	Oryzias_melastigma
ENSSHAG00000017576	RBM47	100	84.746	ENSOGAG00000025193	-	100	85.085	Otolemur_garnettii
ENSSHAG00000017576	RBM47	100	91.568	ENSOGAG00000029367	-	100	91.906	Otolemur_garnettii
ENSSHAG00000017576	RBM47	100	84.095	ENSOARG00000012711	RBM47	100	84.264	Ovis_aries
ENSSHAG00000017576	RBM47	100	91.695	ENSPPAG00000029763	RBM47	100	91.864	Pan_paniscus
ENSSHAG00000017576	RBM47	100	90.000	ENSPPRG00000012873	RBM47	100	92.533	Panthera_pardus
ENSSHAG00000017576	RBM47	85	89.421	ENSPTIG00000017046	RBM47	100	89.222	Panthera_tigris_altaica
ENSSHAG00000017576	RBM47	100	91.864	ENSPTRG00000016006	RBM47	100	93.067	Pan_troglodytes
ENSSHAG00000017576	RBM47	100	91.864	ENSPANG00000005980	RBM47	100	93.067	Papio_anubis
ENSSHAG00000017576	RBM47	96	76.215	ENSPKIG00000013431	RBM47	98	83.161	Paramormyrops_kingsleyae
ENSSHAG00000017576	RBM47	96	77.972	ENSPKIG00000005037	rbm47	100	75.914	Paramormyrops_kingsleyae
ENSSHAG00000017576	RBM47	89	93.195	ENSPSIG00000017516	RBM47	97	93.195	Pelodiscus_sinensis
ENSSHAG00000017576	RBM47	100	75.966	ENSPMGG00000018540	rbm47	100	76.717	Periophthalmus_magnuspinnatus
ENSSHAG00000017576	RBM47	100	89.748	ENSPEMG00000011088	Rbm47	100	91.223	Peromyscus_maniculatus_bairdii
ENSSHAG00000017576	RBM47	96	79.723	ENSPFOG00000007997	rbm47	100	75.896	Poecilia_formosa
ENSSHAG00000017576	RBM47	100	84.000	ENSPLAG00000002072	rbm47	100	84.000	Poecilia_latipinna
ENSSHAG00000017576	RBM47	96	87.006	ENSPMEG00000017492	rbm47	100	81.841	Poecilia_mexicana
ENSSHAG00000017576	RBM47	100	84.267	ENSPREG00000008456	rbm47	100	84.267	Poecilia_reticulata
ENSSHAG00000017576	RBM47	98	79.258	ENSPPYG00000014688	RBM47	100	78.547	Pongo_abelii
ENSSHAG00000017576	RBM47	81	93.000	ENSPCAG00000011879	RBM47	81	93.000	Procavia_capensis
ENSSHAG00000017576	RBM47	100	87.627	ENSPCOG00000023451	RBM47	100	88.136	Propithecus_coquereli
ENSSHAG00000017576	RBM47	100	90.067	ENSPVAG00000003812	RBM47	100	90.909	Pteropus_vampyrus
ENSSHAG00000017576	RBM47	100	76.183	ENSPNYG00000022868	rbm47	100	76.183	Pundamilia_nyererei
ENSSHAG00000017576	RBM47	100	77.011	ENSPNAG00000007940	rbm47	100	77.340	Pygocentrus_nattereri
ENSSHAG00000017576	RBM47	100	90.388	ENSRNOG00000002408	Rbm47	100	90.556	Rattus_norvegicus
ENSSHAG00000017576	RBM47	100	92.203	ENSRBIG00000039601	RBM47	100	93.067	Rhinopithecus_bieti
ENSSHAG00000017576	RBM47	100	92.203	ENSRROG00000044696	RBM47	100	93.067	Rhinopithecus_roxellana
ENSSHAG00000017576	RBM47	100	88.814	ENSSBOG00000028475	RBM47	100	92.769	Saimiri_boliviensis_boliviensis
ENSSHAG00000017576	RBM47	100	74.338	ENSSFOG00015012445	rbm47	100	74.627	Scleropages_formosus
ENSSHAG00000017576	RBM47	100	75.503	ENSSFOG00015024101	RBM47	100	75.336	Scleropages_formosus
ENSSHAG00000017576	RBM47	100	81.234	ENSSMAG00000009744	rbm47	100	81.234	Scophthalmus_maximus
ENSSHAG00000017576	RBM47	100	78.655	ENSSDUG00000022684	rbm47	100	77.815	Seriola_dumerili
ENSSHAG00000017576	RBM47	100	79.328	ENSSLDG00000003109	rbm47	100	81.266	Seriola_lalandi_dorsalis
ENSSHAG00000017576	RBM47	85	92.188	ENSSARG00000001735	RBM47	75	92.188	Sorex_araneus
ENSSHAG00000017576	RBM47	100	93.369	ENSSPUG00000007515	RBM47	100	93.867	Sphenodon_punctatus
ENSSHAG00000017576	RBM47	100	83.120	ENSSPAG00000001257	rbm47	100	83.120	Stegastes_partitus
ENSSHAG00000017576	RBM47	100	91.709	ENSSSCG00000008796	RBM47	100	92.555	Sus_scrofa
ENSSHAG00000017576	RBM47	100	90.420	ENSTGUG00000008705	RBM47	100	91.261	Taeniopygia_guttata
ENSSHAG00000017576	RBM47	100	77.387	ENSTRUG00000014050	rbm47	100	76.846	Takifugu_rubripes
ENSSHAG00000017576	RBM47	100	76.519	ENSTNIG00000006127	rbm47	100	75.987	Tetraodon_nigroviridis
ENSSHAG00000017576	RBM47	77	86.133	ENSTBEG00000001607	RBM47	76	86.400	Tupaia_belangeri
ENSSHAG00000017576	RBM47	100	91.032	ENSTTRG00000002839	RBM47	100	91.709	Tursiops_truncatus
ENSSHAG00000017576	RBM47	100	91.906	ENSUAMG00000021346	RBM47	100	91.737	Ursus_americanus
ENSSHAG00000017576	RBM47	57	92.021	ENSVPAG00000000641	-	57	91.096	Vicugna_pacos
ENSSHAG00000017576	RBM47	96	91.373	ENSVVUG00000014774	RBM47	100	90.034	Vulpes_vulpes
ENSSHAG00000017576	RBM47	100	86.678	ENSXETG00000012802	rbm47	100	86.678	Xenopus_tropicalis
ENSSHAG00000017576	RBM47	100	84.000	ENSXCOG00000000780	rbm47	100	84.000	Xiphophorus_couchianus
ENSSHAG00000017576	RBM47	96	86.723	ENSXMAG00000009874	rbm47	100	81.586	Xiphophorus_maculatus