EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000017642 (Gene tree)
Gene ID: 100929668
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 45991 bases
Position: chrGL856887.1:2871118-2917108
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000020802	Myb_Cef	PF11831.8	1.3e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000020969	-	2418	-	ENSSHAP00000020802	805 (aa)	-	G3WZE7

Gene Model

Click here to download ENSSHAG00000017642's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000017642's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000017642	-	100	95.155	ENSG00000096401	CDC5L	100	95.155	Homo_sapiens
ENSSHAG00000017642	-	99	78.298	ENSAPOG00000009828	cdc5l	99	78.298	Acanthochromis_polyacanthus
ENSSHAG00000017642	-	100	95.037	ENSAMEG00000011685	CDC5L	100	95.037	Ailuropoda_melanoleuca
ENSSHAG00000017642	-	99	78.175	ENSAOCG00000000762	cdc5l	99	78.175	Amphiprion_ocellaris
ENSSHAG00000017642	-	99	78.052	ENSAPEG00000014728	cdc5l	99	78.052	Amphiprion_percula
ENSSHAG00000017642	-	99	78.422	ENSATEG00000016760	cdc5l	99	78.422	Anabas_testudineus
ENSSHAG00000017642	-	99	91.056	ENSAPLG00000015586	CDC5L	100	91.056	Anas_platyrhynchos
ENSSHAG00000017642	-	100	92.050	ENSACAG00000012874	CDC5L	100	92.050	Anolis_carolinensis
ENSSHAG00000017642	-	100	94.907	ENSANAG00000028499	CDC5L	100	94.907	Aotus_nancymaae
ENSSHAG00000017642	-	99	75.369	ENSACLG00000027113	cdc5l	99	75.369	Astatotilapia_calliptera
ENSSHAG00000017642	-	97	83.077	ENSAMXG00000000894	cdc5l	99	82.821	Astyanax_mexicanus
ENSSHAG00000017642	-	100	94.907	ENSBTAG00000020012	CDC5L	100	94.907	Bos_taurus
ENSSHAG00000017642	-	99	47.109	WBGene00008386	cdc-5L	97	47.109	Caenorhabditis_elegans
ENSSHAG00000017642	-	100	94.907	ENSCJAG00000012210	CDC5L	100	94.907	Callithrix_jacchus
ENSSHAG00000017642	-	100	95.155	ENSCAFG00000001996	CDC5L	100	95.155	Canis_familiaris
ENSSHAG00000017642	-	100	95.155	ENSCAFG00020012353	CDC5L	100	95.155	Canis_lupus_dingo
ENSSHAG00000017642	-	100	94.907	ENSCHIG00000022031	CDC5L	100	94.907	Capra_hircus
ENSSHAG00000017642	-	100	94.907	ENSTSYG00000013155	CDC5L	100	94.907	Carlito_syrichta
ENSSHAG00000017642	-	98	80.380	ENSCAPG00000016503	CDC5L	100	80.633	Cavia_aperea
ENSSHAG00000017642	-	100	95.031	ENSCPOG00000000961	CDC5L	100	95.031	Cavia_porcellus
ENSSHAG00000017642	-	100	95.031	ENSCCAG00000032324	CDC5L	100	95.031	Cebus_capucinus
ENSSHAG00000017642	-	100	95.031	ENSCATG00000038925	CDC5L	100	95.031	Cercocebus_atys
ENSSHAG00000017642	-	100	95.155	ENSCLAG00000014884	CDC5L	100	95.155	Chinchilla_lanigera
ENSSHAG00000017642	-	100	95.155	ENSCSAG00000012464	CDC5L	100	95.155	Chlorocebus_sabaeus
ENSSHAG00000017642	-	100	75.776	ENSCHOG00000001728	CDC5L	100	75.776	Choloepus_hoffmanni
ENSSHAG00000017642	-	100	94.037	ENSCPBG00000016346	CDC5L	100	94.037	Chrysemys_picta_bellii
ENSSHAG00000017642	-	99	61.471	ENSCING00000007995	-	99	61.596	Ciona_intestinalis
ENSSHAG00000017642	-	99	61.548	ENSCSAVG00000010518	-	100	60.625	Ciona_savignyi
ENSSHAG00000017642	-	100	95.155	ENSCANG00000032340	CDC5L	100	95.155	Colobus_angolensis_palliatus
ENSSHAG00000017642	-	93	93.583	ENSCGRG00001019419	-	100	93.583	Cricetulus_griseus_chok1gshd
ENSSHAG00000017642	-	100	73.043	ENSCGRG00001007741	-	100	73.043	Cricetulus_griseus_chok1gshd
ENSSHAG00000017642	-	100	66.005	ENSCGRG00001021667	-	100	66.005	Cricetulus_griseus_chok1gshd
ENSSHAG00000017642	-	98	93.038	ENSCGRG00000006762	-	100	93.038	Cricetulus_griseus_crigri
ENSSHAG00000017642	-	99	75.092	ENSCSEG00000017309	cdc5l	99	75.092	Cynoglossus_semilaevis
ENSSHAG00000017642	-	82	96.575	ENSCVAG00000014810	cdc5l	93	96.575	Cyprinodon_variegatus
ENSSHAG00000017642	-	99	84.826	ENSDARG00000043797	cdc5l	99	84.826	Danio_rerio
ENSSHAG00000017642	-	99	89.233	ENSDNOG00000044224	CDC5L	98	89.356	Dasypus_novemcinctus
ENSSHAG00000017642	-	100	94.783	ENSDORG00000009131	-	100	94.783	Dipodomys_ordii
ENSSHAG00000017642	-	99	63.892	FBgn0265574	Cdc5	98	63.892	Drosophila_melanogaster
ENSSHAG00000017642	-	86	94.837	ENSETEG00000013241	CDC5L	87	94.837	Echinops_telfairi
ENSSHAG00000017642	-	81	68.445	ENSEBUG00000016336	cdc5l	99	68.445	Eptatretus_burgeri
ENSSHAG00000017642	-	100	95.155	ENSEASG00005003742	CDC5L	100	95.155	Equus_asinus_asinus
ENSSHAG00000017642	-	100	95.155	ENSECAG00000010081	CDC5L	100	95.155	Equus_caballus
ENSSHAG00000017642	-	91	80.000	ENSEEUG00000007288	CDC5L	91	80.000	Erinaceus_europaeus
ENSSHAG00000017642	-	100	78.695	ENSELUG00000013492	cdc5l	100	78.695	Esox_lucius
ENSSHAG00000017642	-	100	95.155	ENSFCAG00000009570	CDC5L	100	95.155	Felis_catus
ENSSHAG00000017642	-	100	92.174	ENSFALG00000012688	CDC5L	100	92.174	Ficedula_albicollis
ENSSHAG00000017642	-	100	94.534	ENSFDAG00000018610	CDC5L	100	94.534	Fukomys_damarensis
ENSSHAG00000017642	-	99	77.228	ENSFHEG00000013091	cdc5l	99	77.228	Fundulus_heteroclitus
ENSSHAG00000017642	-	99	75.799	ENSGMOG00000000407	cdc5l	99	75.799	Gadus_morhua
ENSSHAG00000017642	-	100	92.174	ENSGALG00000016704	CDC5L	90	92.174	Gallus_gallus
ENSSHAG00000017642	-	65	83.365	ENSGAFG00000003610	cdc5l	94	83.365	Gambusia_affinis
ENSSHAG00000017642	-	99	75.956	ENSGACG00000011733	cdc5l	99	75.956	Gasterosteus_aculeatus
ENSSHAG00000017642	-	100	93.913	ENSGAGG00000005724	CDC5L	100	93.913	Gopherus_agassizii
ENSSHAG00000017642	-	100	95.155	ENSGGOG00000006784	CDC5L	100	95.155	Gorilla_gorilla
ENSSHAG00000017642	-	80	99.107	ENSHBUG00000017304	cdc5l	99	95.902	Haplochromis_burtoni
ENSSHAG00000017642	-	100	94.658	ENSHGLG00000011993	CDC5L	100	94.658	Heterocephalus_glaber_female
ENSSHAG00000017642	-	100	94.658	ENSHGLG00100005766	CDC5L	100	94.658	Heterocephalus_glaber_male
ENSSHAG00000017642	-	99	73.795	ENSHCOG00000020596	cdc5l	99	73.918	Hippocampus_comes
ENSSHAG00000017642	-	99	85.181	ENSIPUG00000004377	cdc5l	99	85.181	Ictalurus_punctatus
ENSSHAG00000017642	-	100	94.534	ENSSTOG00000016173	CDC5L	100	94.534	Ictidomys_tridecemlineatus
ENSSHAG00000017642	-	100	94.410	ENSJJAG00000012361	-	100	94.410	Jaculus_jaculus
ENSSHAG00000017642	-	99	78.245	ENSKMAG00000007868	cdc5l	99	78.245	Kryptolebias_marmoratus
ENSSHAG00000017642	-	99	75.832	ENSLBEG00000019437	cdc5l	99	75.832	Labrus_bergylta
ENSSHAG00000017642	-	100	86.832	ENSLACG00000008060	CDC5L	100	86.832	Latimeria_chalumnae
ENSSHAG00000017642	-	99	86.924	ENSLOCG00000015811	cdc5l	99	86.924	Lepisosteus_oculatus
ENSSHAG00000017642	-	100	94.658	ENSLAFG00000012689	CDC5L	100	94.658	Loxodonta_africana
ENSSHAG00000017642	-	100	95.155	ENSMFAG00000000812	CDC5L	100	95.155	Macaca_fascicularis
ENSSHAG00000017642	-	100	95.155	ENSMMUG00000014389	CDC5L	100	95.155	Macaca_mulatta
ENSSHAG00000017642	-	100	95.031	ENSMNEG00000036577	CDC5L	100	95.031	Macaca_nemestrina
ENSSHAG00000017642	-	100	95.155	ENSMLEG00000030582	CDC5L	100	95.155	Mandrillus_leucophaeus
ENSSHAG00000017642	-	99	78.325	ENSMAMG00000022399	cdc5l	99	78.325	Mastacembelus_armatus
ENSSHAG00000017642	-	99	77.709	ENSMZEG00005027301	cdc5l	99	77.709	Maylandia_zebra
ENSSHAG00000017642	-	100	91.832	ENSMGAG00000014263	CDC5L	100	91.832	Meleagris_gallopavo
ENSSHAG00000017642	-	100	94.037	ENSMAUG00000013120	-	100	94.037	Mesocricetus_auratus
ENSSHAG00000017642	-	100	94.410	ENSMICG00000006933	CDC5L	100	94.410	Microcebus_murinus
ENSSHAG00000017642	-	100	94.161	ENSMOCG00000022910	-	100	94.161	Microtus_ochrogaster
ENSSHAG00000017642	-	92	67.371	ENSMMOG00000006817	cdc5l	99	64.005	Mola_mola
ENSSHAG00000017642	-	99	84.731	ENSMODG00000003716	-	99	84.731	Monodelphis_domestica
ENSSHAG00000017642	-	100	99.379	ENSMODG00000018923	-	100	99.379	Monodelphis_domestica
ENSSHAG00000017642	-	99	84.355	ENSMODG00000003702	-	99	84.355	Monodelphis_domestica
ENSSHAG00000017642	-	99	76.819	ENSMALG00000021999	cdc5l	99	76.819	Monopterus_albus
ENSSHAG00000017642	-	100	93.913	MGP_CAROLIEiJ_G0021641	-	100	93.913	Mus_caroli
ENSSHAG00000017642	-	100	92.422	ENSMUSG00000112495	Gm9048	100	92.422	Mus_musculus
ENSSHAG00000017642	-	100	92.422	ENSMUSG00000112216	Gm32717	100	92.422	Mus_musculus
ENSSHAG00000017642	-	100	92.671	ENSMUSG00000112919	Gm9049	100	92.671	Mus_musculus
ENSSHAG00000017642	-	100	92.547	ENSMUSG00000112419	Gm9044	100	92.547	Mus_musculus
ENSSHAG00000017642	-	100	92.422	ENSMUSG00000112252	Gm32802	100	92.422	Mus_musculus
ENSSHAG00000017642	-	100	92.298	ENSMUSG00000112781	Gm9046	100	92.298	Mus_musculus
ENSSHAG00000017642	-	100	94.286	ENSMUSG00000023932	Cdc5l	100	94.286	Mus_musculus
ENSSHAG00000017642	-	100	92.671	ENSMUSG00000112027	Gm9045	100	92.671	Mus_musculus
ENSSHAG00000017642	-	100	92.547	ENSMUSG00000112814	Gm9040	100	92.547	Mus_musculus
ENSSHAG00000017642	-	100	94.037	MGP_PahariEiJ_G0020633	-	100	94.037	Mus_pahari
ENSSHAG00000017642	-	100	94.286	MGP_SPRETEiJ_G0022553	-	100	94.286	Mus_spretus
ENSSHAG00000017642	-	100	95.031	ENSMPUG00000012546	CDC5L	100	95.031	Mustela_putorius_furo
ENSSHAG00000017642	-	99	95.031	ENSMLUG00000012803	CDC5L	99	95.031	Myotis_lucifugus
ENSSHAG00000017642	-	100	94.286	ENSNGAG00000015764	-	100	94.286	Nannospalax_galili
ENSSHAG00000017642	-	87	92.357	ENSNBRG00000009082	cdc5l	95	92.357	Neolamprologus_brichardi
ENSSHAG00000017642	-	96	92.127	ENSNLEG00000003627	CDC5L	100	92.127	Nomascus_leucogenys
ENSSHAG00000017642	-	71	100.000	ENSMEUG00000012298	-	71	100.000	Notamacropus_eugenii
ENSSHAG00000017642	-	87	79.571	ENSMEUG00000015564	-	100	79.571	Notamacropus_eugenii
ENSSHAG00000017642	-	91	94.118	ENSOPRG00000007745	CDC5L	91	94.118	Ochotona_princeps
ENSSHAG00000017642	-	100	95.280	ENSODEG00000017235	CDC5L	100	95.280	Octodon_degus
ENSSHAG00000017642	-	99	77.463	ENSONIG00000001420	cdc5l	99	77.463	Oreochromis_niloticus
ENSSHAG00000017642	-	100	95.901	ENSOANG00000008262	CDC5L	100	95.901	Ornithorhynchus_anatinus
ENSSHAG00000017642	-	100	95.280	ENSOCUG00000017240	CDC5L	100	95.280	Oryctolagus_cuniculus
ENSSHAG00000017642	-	99	76.847	ENSORLG00000018576	cdc5l	99	76.847	Oryzias_latipes
ENSSHAG00000017642	-	99	77.463	ENSOMEG00000015638	cdc5l	99	77.463	Oryzias_melastigma
ENSSHAG00000017642	-	99	94.286	ENSOGAG00000008211	CDC5L	99	94.286	Otolemur_garnettii
ENSSHAG00000017642	-	100	94.907	ENSOARG00000010205	CDC5L	100	94.907	Ovis_aries
ENSSHAG00000017642	-	100	95.031	ENSPPAG00000031456	CDC5L	100	95.031	Pan_paniscus
ENSSHAG00000017642	-	100	95.155	ENSPPRG00000014475	CDC5L	100	95.155	Panthera_pardus
ENSSHAG00000017642	-	100	95.031	ENSPTIG00000006547	CDC5L	100	95.031	Panthera_tigris_altaica
ENSSHAG00000017642	-	100	95.031	ENSPTRG00000018224	CDC5L	100	95.031	Pan_troglodytes
ENSSHAG00000017642	-	100	95.155	ENSPANG00000018654	CDC5L	100	95.155	Papio_anubis
ENSSHAG00000017642	-	99	83.437	ENSPKIG00000015398	cdc5l	99	83.437	Paramormyrops_kingsleyae
ENSSHAG00000017642	-	100	93.043	ENSPSIG00000013123	CDC5L	100	93.043	Pelodiscus_sinensis
ENSSHAG00000017642	-	100	78.536	ENSPEMG00000007860	-	100	78.536	Peromyscus_maniculatus_bairdii
ENSSHAG00000017642	-	99	77.045	ENSPMAG00000005250	cdc5l	99	77.045	Petromyzon_marinus
ENSSHAG00000017642	-	100	99.503	ENSPCIG00000024040	-	100	99.503	Phascolarctos_cinereus
ENSSHAG00000017642	-	99	77.531	ENSPFOG00000013630	cdc5l	99	77.531	Poecilia_formosa
ENSSHAG00000017642	-	99	77.654	ENSPLAG00000001970	cdc5l	99	77.654	Poecilia_latipinna
ENSSHAG00000017642	-	99	77.901	ENSPMEG00000001452	cdc5l	99	77.901	Poecilia_mexicana
ENSSHAG00000017642	-	99	78.325	ENSPREG00000004453	cdc5l	99	78.325	Poecilia_reticulata
ENSSHAG00000017642	-	100	95.031	ENSPPYG00000016661	CDC5L	100	95.031	Pongo_abelii
ENSSHAG00000017642	-	87	84.571	ENSPCAG00000011444	CDC5L	100	84.571	Procavia_capensis
ENSSHAG00000017642	-	69	76.854	ENSPCOG00000024619	CDC5L	71	76.854	Propithecus_coquereli
ENSSHAG00000017642	-	100	95.155	ENSPVAG00000004579	CDC5L	100	95.155	Pteropus_vampyrus
ENSSHAG00000017642	-	99	84.807	ENSPNAG00000006467	cdc5l	99	84.807	Pygocentrus_nattereri
ENSSHAG00000017642	-	100	94.037	ENSRNOG00000019975	Cdc5l	100	94.037	Rattus_norvegicus
ENSSHAG00000017642	-	100	88.586	ENSRBIG00000037455	CDC5L	100	88.586	Rhinopithecus_bieti
ENSSHAG00000017642	-	100	95.155	ENSRROG00000029176	CDC5L	100	95.155	Rhinopithecus_roxellana
ENSSHAG00000017642	-	100	95.031	ENSSBOG00000031265	CDC5L	100	95.031	Saimiri_boliviensis_boliviensis
ENSSHAG00000017642	-	99	84.184	ENSSFOG00015015844	cdc5l	99	84.184	Scleropages_formosus
ENSSHAG00000017642	-	99	76.695	ENSSMAG00000001917	cdc5l	99	76.695	Scophthalmus_maximus
ENSSHAG00000017642	-	99	78.052	ENSSDUG00000014563	cdc5l	99	78.052	Seriola_dumerili
ENSSHAG00000017642	-	99	78.052	ENSSLDG00000017777	cdc5l	99	78.052	Seriola_lalandi_dorsalis
ENSSHAG00000017642	-	89	94.599	ENSSARG00000012371	CDC5L	91	94.599	Sorex_araneus
ENSSHAG00000017642	-	100	92.795	ENSSPUG00000006685	CDC5L	100	92.795	Sphenodon_punctatus
ENSSHAG00000017642	-	99	77.928	ENSSPAG00000023162	cdc5l	99	77.928	Stegastes_partitus
ENSSHAG00000017642	-	100	94.783	ENSSSCG00000001708	CDC5L	100	94.783	Sus_scrofa
ENSSHAG00000017642	-	100	91.224	ENSTGUG00000013251	CDC5L	100	91.224	Taeniopygia_guttata
ENSSHAG00000017642	-	99	75.553	ENSTRUG00000006648	cdc5l	99	75.553	Takifugu_rubripes
ENSSHAG00000017642	-	99	75.246	ENSTNIG00000009853	cdc5l	99	75.246	Tetraodon_nigroviridis
ENSSHAG00000017642	-	73	95.940	ENSTBEG00000017422	CDC5L	73	95.940	Tupaia_belangeri
ENSSHAG00000017642	-	100	94.658	ENSTTRG00000006940	CDC5L	100	94.658	Tursiops_truncatus
ENSSHAG00000017642	-	68	92.687	ENSUAMG00000028303	CDC5L	100	92.687	Ursus_americanus
ENSSHAG00000017642	-	100	95.155	ENSUMAG00000005223	CDC5L	100	95.155	Ursus_maritimus
ENSSHAG00000017642	-	98	94.937	ENSVPAG00000008981	CDC5L	100	94.937	Vicugna_pacos
ENSSHAG00000017642	-	100	95.155	ENSVVUG00000029242	CDC5L	100	95.155	Vulpes_vulpes
ENSSHAG00000017642	-	99	76.744	ENSXETG00000007885	cdc5l	99	76.744	Xenopus_tropicalis
ENSSHAG00000017642	-	99	77.778	ENSXCOG00000014117	cdc5l	99	77.778	Xiphophorus_couchianus
ENSSHAG00000017642	-	99	77.778	ENSXMAG00000006816	cdc5l	99	77.778	Xiphophorus_maculatus