EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000017772 (Gene tree)
Gene ID: 100915680
Gene Symbol: GFM1
Alias: EFGM|EGF1|GFM|mtEF-G1
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 36997 bases
Position: chrGL849915.1:2968218-3005214
Accession: 13780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000020955	GTP_EFTU	PF00009.27	3.9e-62	1	1
ENSSHAP00000020956	GTP_EFTU	PF00009.27	4e-62	1	1
ENSSHAP00000020955	GTP_EFTU_D2	PF03144.25	3.6e-17	1	1
ENSSHAP00000020956	GTP_EFTU_D2	PF03144.25	3.6e-17	1	1
ENSSHAP00000020955	EFG_IV	PF03764.18	6.8e-35	1	1
ENSSHAP00000020956	EFG_IV	PF03764.18	6.9e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000021126	GFM1-202	2253	-	ENSSHAP00000020956	750 (aa)	-	G3WZV1
ENSSHAT00000021125	GFM1-201	2244	-	ENSSHAP00000020955	747 (aa)	-	G3WZV0

Gene Model

Click here to download ENSSHAG00000017772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000017772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000017772	GFM1	92	33.650	ENSSHAG00000017593	GFM2	91	33.786
ENSSHAG00000017772	GFM1	73	38.926	ENSSHAG00000007539	EEF2	71	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000017772	GFM1	98	86.957	ENSG00000168827	GFM1	100	100.000	Homo_sapiens
ENSSHAG00000017772	GFM1	90	79.464	ENSAPOG00000016489	gfm1	96	79.730	Acanthochromis_polyacanthus
ENSSHAG00000017772	GFM1	98	86.468	ENSAMEG00000013542	GFM1	98	86.253	Ailuropoda_melanoleuca
ENSSHAG00000017772	GFM1	97	76.828	ENSACIG00000014465	gfm1	94	76.828	Amphilophus_citrinellus
ENSSHAG00000017772	GFM1	96	80.641	ENSAOCG00000006023	gfm1	96	80.641	Amphiprion_ocellaris
ENSSHAG00000017772	GFM1	96	80.726	ENSAPEG00000024499	gfm1	99	80.726	Amphiprion_percula
ENSSHAG00000017772	GFM1	99	79.463	ENSATEG00000013789	gfm1	99	79.463	Anabas_testudineus
ENSSHAG00000017772	GFM1	97	83.310	ENSAPLG00000005022	GFM1	100	83.310	Anas_platyrhynchos
ENSSHAG00000017772	GFM1	97	83.448	ENSACAG00000006829	GFM1	100	82.138	Anolis_carolinensis
ENSSHAG00000017772	GFM1	97	88.356	ENSANAG00000035983	GFM1	98	87.722	Aotus_nancymaae
ENSSHAG00000017772	GFM1	98	81.769	ENSACLG00000016586	gfm1	99	81.129	Astatotilapia_calliptera
ENSSHAG00000017772	GFM1	98	79.539	ENSAMXG00000013435	gfm1	98	79.539	Astyanax_mexicanus
ENSSHAG00000017772	GFM1	99	87.449	ENSBTAG00000027795	GFM1	98	87.755	Bos_taurus
ENSSHAG00000017772	GFM1	94	56.205	WBGene00009246	gfm-1	95	56.039	Caenorhabditis_elegans
ENSSHAG00000017772	GFM1	99	87.032	ENSCJAG00000000363	GFM1	99	87.032	Callithrix_jacchus
ENSSHAG00000017772	GFM1	97	88.552	ENSCAFG00000009006	GFM1	100	88.757	Canis_familiaris
ENSSHAG00000017772	GFM1	97	88.658	ENSCAFG00020005878	GFM1	99	88.658	Canis_lupus_dingo
ENSSHAG00000017772	GFM1	99	87.584	ENSCHIG00000015220	GFM1	98	87.584	Capra_hircus
ENSSHAG00000017772	GFM1	99	86.253	ENSTSYG00000002013	GFM1	99	86.253	Carlito_syrichta
ENSSHAG00000017772	GFM1	97	76.374	ENSCAPG00000005699	GFM1	98	76.341	Cavia_aperea
ENSSHAG00000017772	GFM1	99	86.388	ENSCPOG00000001194	GFM1	98	87.092	Cavia_porcellus
ENSSHAG00000017772	GFM1	99	86.497	ENSCCAG00000025561	GFM1	99	86.497	Cebus_capucinus
ENSSHAG00000017772	GFM1	99	85.695	ENSCATG00000037622	GFM1	99	85.695	Cercocebus_atys
ENSSHAG00000017772	GFM1	98	86.160	ENSCLAG00000002503	GFM1	98	86.160	Chinchilla_lanigera
ENSSHAG00000017772	GFM1	99	86.096	ENSCSAG00000012162	GFM1	99	86.096	Chlorocebus_sabaeus
ENSSHAG00000017772	GFM1	100	77.437	ENSCHOG00000004867	GFM1	99	77.437	Choloepus_hoffmanni
ENSSHAG00000017772	GFM1	99	83.175	ENSCPBG00000018367	GFM1	99	83.175	Chrysemys_picta_bellii
ENSSHAG00000017772	GFM1	97	59.375	ENSCING00000011960	-	95	59.375	Ciona_intestinalis
ENSSHAG00000017772	GFM1	94	61.222	ENSCSAVG00000008514	-	100	58.856	Ciona_savignyi
ENSSHAG00000017772	GFM1	98	86.957	ENSCANG00000031714	GFM1	99	86.096	Colobus_angolensis_palliatus
ENSSHAG00000017772	GFM1	99	86.461	ENSCGRG00001022095	GFM1	99	86.461	Cricetulus_griseus_chok1gshd
ENSSHAG00000017772	GFM1	99	86.461	ENSCGRG00000012043	GFM1	99	86.461	Cricetulus_griseus_crigri
ENSSHAG00000017772	GFM1	97	75.380	ENSCSEG00000017088	gfm1	99	75.380	Cynoglossus_semilaevis
ENSSHAG00000017772	GFM1	96	82.173	ENSCVAG00000004126	gfm1	99	81.215	Cyprinodon_variegatus
ENSSHAG00000017772	GFM1	96	79.526	ENSDARG00000063624	gfm1	96	79.526	Danio_rerio
ENSSHAG00000017772	GFM1	55	85.330	ENSDNOG00000016385	-	100	85.330	Dasypus_novemcinctus
ENSSHAG00000017772	GFM1	99	85.580	ENSDORG00000014165	Gfm1	99	85.580	Dipodomys_ordii
ENSSHAG00000017772	GFM1	95	66.996	FBgn0263133	mEFG1	95	66.996	Drosophila_melanogaster
ENSSHAG00000017772	GFM1	98	78.947	ENSETEG00000019197	GFM1	98	78.763	Echinops_telfairi
ENSSHAG00000017772	GFM1	90	65.185	ENSEBUG00000012794	gfm1	100	65.185	Eptatretus_burgeri
ENSSHAG00000017772	GFM1	96	65.746	ENSEEUG00000000429	GFM1	99	65.746	Erinaceus_europaeus
ENSSHAG00000017772	GFM1	97	79.172	ENSELUG00000014728	gfm1	97	79.391	Esox_lucius
ENSSHAG00000017772	GFM1	98	87.908	ENSFCAG00000013291	GFM1	99	87.015	Felis_catus
ENSSHAG00000017772	GFM1	90	82.815	ENSFALG00000007619	GFM1	100	82.815	Ficedula_albicollis
ENSSHAG00000017772	GFM1	99	85.984	ENSFDAG00000016559	GFM1	98	86.821	Fukomys_damarensis
ENSSHAG00000017772	GFM1	97	81.103	ENSFHEG00000006091	gfm1	97	81.328	Fundulus_heteroclitus
ENSSHAG00000017772	GFM1	97	78.955	ENSGMOG00000010161	gfm1	100	78.955	Gadus_morhua
ENSSHAG00000017772	GFM1	97	82.645	ENSGALG00000009634	GFM1	98	82.645	Gallus_gallus
ENSSHAG00000017772	GFM1	97	81.103	ENSGAFG00000012527	gfm1	97	81.328	Gambusia_affinis
ENSSHAG00000017772	GFM1	98	79.484	ENSGACG00000009864	gfm1	98	79.484	Gasterosteus_aculeatus
ENSSHAG00000017772	GFM1	98	87.228	ENSGGOG00000003085	GFM1	99	86.364	Gorilla_gorilla
ENSSHAG00000017772	GFM1	98	81.905	ENSHBUG00000002120	gfm1	98	81.905	Haplochromis_burtoni
ENSSHAG00000017772	GFM1	98	86.549	ENSHGLG00000016855	GFM1	98	86.549	Heterocephalus_glaber_female
ENSSHAG00000017772	GFM1	98	86.549	ENSHGLG00100013049	GFM1	98	86.549	Heterocephalus_glaber_male
ENSSHAG00000017772	GFM1	99	79.622	ENSHCOG00000007638	gfm1	98	80.755	Hippocampus_comes
ENSSHAG00000017772	GFM1	97	79.862	ENSIPUG00000005873	gfm1	97	79.862	Ictalurus_punctatus
ENSSHAG00000017772	GFM1	97	87.603	ENSSTOG00000010150	GFM1	98	87.603	Ictidomys_tridecemlineatus
ENSSHAG00000017772	GFM1	99	84.718	ENSJJAG00000016447	Gfm1	99	84.718	Jaculus_jaculus
ENSSHAG00000017772	GFM1	98	78.125	ENSKMAG00000020768	gfm1	97	79.115	Kryptolebias_marmoratus
ENSSHAG00000017772	GFM1	94	81.312	ENSLBEG00000021315	gfm1	100	81.312	Labrus_bergylta
ENSSHAG00000017772	GFM1	97	80.498	ENSLACG00000012295	GFM1	98	80.498	Latimeria_chalumnae
ENSSHAG00000017772	GFM1	97	76.236	ENSLOCG00000003778	gfm1	99	76.236	Lepisosteus_oculatus
ENSSHAG00000017772	GFM1	97	87.448	ENSLAFG00000010945	GFM1	100	86.069	Loxodonta_africana
ENSSHAG00000017772	GFM1	100	85.867	ENSMFAG00000035731	GFM1	99	85.867	Macaca_fascicularis
ENSSHAG00000017772	GFM1	100	86.000	ENSMMUG00000004961	GFM1	99	86.000	Macaca_mulatta
ENSSHAG00000017772	GFM1	99	85.963	ENSMNEG00000033245	GFM1	99	85.963	Macaca_nemestrina
ENSSHAG00000017772	GFM1	97	85.517	ENSMLEG00000030908	GFM1	100	85.330	Mandrillus_leucophaeus
ENSSHAG00000017772	GFM1	97	82.207	ENSMAMG00000011760	gfm1	97	82.434	Mastacembelus_armatus
ENSSHAG00000017772	GFM1	98	81.905	ENSMZEG00005016639	gfm1	98	81.905	Maylandia_zebra
ENSSHAG00000017772	GFM1	97	82.280	ENSMGAG00000010641	GFM1	98	82.280	Meleagris_gallopavo
ENSSHAG00000017772	GFM1	99	87.131	ENSMAUG00000000611	Gfm1	99	87.131	Mesocricetus_auratus
ENSSHAG00000017772	GFM1	97	87.808	ENSMICG00000049086	GFM1	98	87.009	Microcebus_murinus
ENSSHAG00000017772	GFM1	99	86.997	ENSMOCG00000000465	Gfm1	99	86.997	Microtus_ochrogaster
ENSSHAG00000017772	GFM1	97	80.663	ENSMMOG00000012538	gfm1	98	80.775	Mola_mola
ENSSHAG00000017772	GFM1	99	91.375	ENSMODG00000015673	GFM1	100	91.375	Monodelphis_domestica
ENSSHAG00000017772	GFM1	95	81.882	ENSMALG00000012508	gfm1	95	81.882	Monopterus_albus
ENSSHAG00000017772	GFM1	99	86.595	MGP_CAROLIEiJ_G0025052	Gfm1	99	87.146	Mus_caroli
ENSSHAG00000017772	GFM1	99	86.461	ENSMUSG00000027774	Gfm1	99	86.461	Mus_musculus
ENSSHAG00000017772	GFM1	99	86.729	MGP_PahariEiJ_G0026495	Gfm1	99	86.957	Mus_pahari
ENSSHAG00000017772	GFM1	99	86.461	MGP_SPRETEiJ_G0025994	Gfm1	99	86.957	Mus_spretus
ENSSHAG00000017772	GFM1	99	86.059	ENSMPUG00000002859	GFM1	99	86.059	Mustela_putorius_furo
ENSSHAG00000017772	GFM1	99	88.140	ENSMLUG00000000452	GFM1	98	88.451	Myotis_lucifugus
ENSSHAG00000017772	GFM1	99	85.965	ENSNGAG00000012375	Gfm1	99	85.965	Nannospalax_galili
ENSSHAG00000017772	GFM1	97	82.735	ENSNBRG00000004631	gfm1	99	82.735	Neolamprologus_brichardi
ENSSHAG00000017772	GFM1	98	86.957	ENSNLEG00000004176	GFM1	99	86.096	Nomascus_leucogenys
ENSSHAG00000017772	GFM1	91	84.627	ENSMEUG00000007784	GFM1	100	84.627	Notamacropus_eugenii
ENSSHAG00000017772	GFM1	97	86.226	ENSOPRG00000009860	GFM1	99	85.890	Ochotona_princeps
ENSSHAG00000017772	GFM1	98	87.228	ENSODEG00000004316	GFM1	98	87.228	Octodon_degus
ENSSHAG00000017772	GFM1	98	81.905	ENSONIG00000003772	gfm1	98	81.905	Oreochromis_niloticus
ENSSHAG00000017772	GFM1	98	87.145	ENSOCUG00000013561	GFM1	97	88.082	Oryctolagus_cuniculus
ENSSHAG00000017772	GFM1	95	82.486	ENSORLG00000006487	gfm1	100	82.486	Oryzias_latipes
ENSSHAG00000017772	GFM1	98	80.654	ENSORLG00020003362	gfm1	99	80.189	Oryzias_latipes_hni
ENSSHAG00000017772	GFM1	98	80.790	ENSORLG00015005829	gfm1	99	80.323	Oryzias_latipes_hsok
ENSSHAG00000017772	GFM1	98	81.471	ENSOMEG00000012894	gfm1	98	81.471	Oryzias_melastigma
ENSSHAG00000017772	GFM1	100	85.619	ENSOGAG00000008298	GFM1	99	85.619	Otolemur_garnettii
ENSSHAG00000017772	GFM1	97	88.308	ENSOARG00000002409	GFM1	100	88.308	Ovis_aries
ENSSHAG00000017772	GFM1	98	87.228	ENSPPAG00000033881	GFM1	99	86.364	Pan_paniscus
ENSSHAG00000017772	GFM1	98	87.908	ENSPPRG00000009281	GFM1	99	87.015	Panthera_pardus
ENSSHAG00000017772	GFM1	98	87.772	ENSPTIG00000012416	GFM1	99	86.881	Panthera_tigris_altaica
ENSSHAG00000017772	GFM1	98	87.228	ENSPTRG00000015570	GFM1	99	86.364	Pan_troglodytes
ENSSHAG00000017772	GFM1	99	85.963	ENSPANG00000016512	GFM1	99	85.963	Papio_anubis
ENSSHAG00000017772	GFM1	97	80.276	ENSPKIG00000004876	gfm1	97	80.276	Paramormyrops_kingsleyae
ENSSHAG00000017772	GFM1	99	82.568	ENSPSIG00000012567	GFM1	99	82.568	Pelodiscus_sinensis
ENSSHAG00000017772	GFM1	96	79.583	ENSPMGG00000014068	gfm1	99	79.583	Periophthalmus_magnuspinnatus
ENSSHAG00000017772	GFM1	99	86.059	ENSPEMG00000008942	Gfm1	99	86.059	Peromyscus_maniculatus_bairdii
ENSSHAG00000017772	GFM1	86	90.796	ENSPCIG00000020195	GFM1	96	93.964	Phascolarctos_cinereus
ENSSHAG00000017772	GFM1	97	81.517	ENSPFOG00000011022	gfm1	97	81.743	Poecilia_formosa
ENSSHAG00000017772	GFM1	98	80.654	ENSPLAG00000019585	gfm1	97	80.697	Poecilia_latipinna
ENSSHAG00000017772	GFM1	97	81.379	ENSPMEG00000012376	gfm1	97	81.604	Poecilia_mexicana
ENSSHAG00000017772	GFM1	97	80.690	ENSPREG00000001332	gfm1	92	80.913	Poecilia_reticulata
ENSSHAG00000017772	GFM1	98	86.957	ENSPPYG00000014244	GFM1	99	86.096	Pongo_abelii
ENSSHAG00000017772	GFM1	94	86.202	ENSPCAG00000008934	GFM1	100	86.202	Procavia_capensis
ENSSHAG00000017772	GFM1	97	88.340	ENSPCOG00000022259	GFM1	97	88.340	Propithecus_coquereli
ENSSHAG00000017772	GFM1	99	86.792	ENSPVAG00000013605	GFM1	98	87.092	Pteropus_vampyrus
ENSSHAG00000017772	GFM1	99	81.411	ENSPNYG00000006037	gfm1	98	82.434	Pundamilia_nyererei
ENSSHAG00000017772	GFM1	97	80.249	ENSPNAG00000001237	gfm1	97	80.360	Pygocentrus_nattereri
ENSSHAG00000017772	GFM1	99	86.775	ENSRNOG00000012873	Gfm1	99	86.775	Rattus_norvegicus
ENSSHAG00000017772	GFM1	98	86.549	ENSRBIG00000031363	GFM1	99	85.695	Rhinopithecus_bieti
ENSSHAG00000017772	GFM1	98	86.685	ENSRROG00000031081	GFM1	99	85.829	Rhinopithecus_roxellana
ENSSHAG00000017772	GFM1	97	54.878	YLR069C	-	96	54.878	Saccharomyces_cerevisiae
ENSSHAG00000017772	GFM1	99	86.898	ENSSBOG00000023252	GFM1	99	86.898	Saimiri_boliviensis_boliviensis
ENSSHAG00000017772	GFM1	97	81.018	ENSSFOG00015003117	gfm1	99	81.018	Scleropages_formosus
ENSSHAG00000017772	GFM1	97	80.000	ENSSMAG00000013221	gfm1	97	80.221	Scophthalmus_maximus
ENSSHAG00000017772	GFM1	99	79.139	ENSSDUG00000018665	gfm1	97	80.775	Seriola_dumerili
ENSSHAG00000017772	GFM1	99	78.898	ENSSLDG00000020606	gfm1	97	80.636	Seriola_lalandi_dorsalis
ENSSHAG00000017772	GFM1	97	82.345	ENSSPUG00000018686	GFM1	98	82.345	Sphenodon_punctatus
ENSSHAG00000017772	GFM1	97	81.103	ENSSPAG00000008800	gfm1	97	81.328	Stegastes_partitus
ENSSHAG00000017772	GFM1	99	87.045	ENSSSCG00000025651	GFM1	98	87.045	Sus_scrofa
ENSSHAG00000017772	GFM1	98	80.191	ENSTRUG00000009244	gfm1	98	80.191	Takifugu_rubripes
ENSSHAG00000017772	GFM1	97	81.655	ENSTNIG00000007729	gfm1	97	81.881	Tetraodon_nigroviridis
ENSSHAG00000017772	GFM1	90	78.667	ENSTBEG00000017404	GFM1	89	78.667	Tupaia_belangeri
ENSSHAG00000017772	GFM1	98	87.619	ENSTTRG00000001735	GFM1	97	87.619	Tursiops_truncatus
ENSSHAG00000017772	GFM1	98	87.009	ENSUAMG00000026381	GFM1	98	86.957	Ursus_americanus
ENSSHAG00000017772	GFM1	98	87.009	ENSUMAG00000011268	GFM1	98	86.957	Ursus_maritimus
ENSSHAG00000017772	GFM1	99	83.671	ENSVPAG00000009444	GFM1	98	84.082	Vicugna_pacos
ENSSHAG00000017772	GFM1	99	86.290	ENSVVUG00000020091	GFM1	100	88.314	Vulpes_vulpes
ENSSHAG00000017772	GFM1	99	82.487	ENSXETG00000032551	GFM1	99	82.487	Xenopus_tropicalis
ENSSHAG00000017772	GFM1	53	79.798	ENSXCOG00000012590	gfm1	90	79.397	Xiphophorus_couchianus
ENSSHAG00000017772	GFM1	97	81.103	ENSXMAG00000000261	gfm1	97	81.328	Xiphophorus_maculatus