EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000017789 (Gene tree)
Gene ID: 100934855
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 64315 bases
Position: chrGL849534.1:2982763-3047077
Accession: 100934855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000020979	Nop52	PF05997.12	2.9e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000021149	RRP1B-201	5634	XM_003763388	ENSSHAP00000020979	762 (aa)	XP_003763436	G3WZX4

Gene Model

Click here to download ENSSHAG00000017789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000017789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000017789	RRP1B	100	66.013	ENSG00000160208	RRP1B	100	66.013	Homo_sapiens
ENSSHAG00000017789	RRP1B	77	70.258	ENSAMEG00000011401	RRP1B	99	57.474	Ailuropoda_melanoleuca
ENSSHAG00000017789	RRP1B	59	50.000	ENSAOCG00000017894	-	94	52.113	Amphiprion_ocellaris
ENSSHAG00000017789	RRP1B	65	49.062	ENSAPEG00000024150	-	50	49.575	Amphiprion_percula
ENSSHAG00000017789	RRP1B	94	52.925	ENSAPLG00000004310	RRP1B	100	52.789	Anas_platyrhynchos
ENSSHAG00000017789	RRP1B	99	48.508	ENSACAG00000017851	RRP1B	95	48.254	Anolis_carolinensis
ENSSHAG00000017789	RRP1B	100	64.668	ENSANAG00000034889	RRP1B	100	64.668	Aotus_nancymaae
ENSSHAG00000017789	RRP1B	100	58.954	ENSBTAG00000017418	RRP1B	100	59.869	Bos_taurus
ENSSHAG00000017789	RRP1B	50	50.656	ENSBTAG00000003981	RRP1	77	53.890	Bos_taurus
ENSSHAG00000017789	RRP1B	50	52.368	ENSCJAG00000043205	RRP1	70	55.294	Callithrix_jacchus
ENSSHAG00000017789	RRP1B	100	62.924	ENSCJAG00000017077	RRP1B	100	62.924	Callithrix_jacchus
ENSSHAG00000017789	RRP1B	94	61.389	ENSCAFG00000010621	RRP1B	99	61.859	Canis_familiaris
ENSSHAG00000017789	RRP1B	100	62.092	ENSCAFG00020018901	RRP1B	100	62.533	Canis_lupus_dingo
ENSSHAG00000017789	RRP1B	100	60.784	ENSCHIG00000021519	RRP1B	100	61.961	Capra_hircus
ENSSHAG00000017789	RRP1B	100	55.294	ENSCPOG00000002396	RRP1B	100	54.581	Cavia_porcellus
ENSSHAG00000017789	RRP1B	100	63.885	ENSCCAG00000029384	RRP1B	100	63.625	Cebus_capucinus
ENSSHAG00000017789	RRP1B	56	47.973	ENSCCAG00000029828	RRP1	74	55.102	Cebus_capucinus
ENSSHAG00000017789	RRP1B	100	65.535	ENSCATG00000017423	RRP1B	100	65.535	Cercocebus_atys
ENSSHAG00000017789	RRP1B	55	45.902	ENSCLAG00000011639	RRP1	76	50.852	Chinchilla_lanigera
ENSSHAG00000017789	RRP1B	100	57.625	ENSCLAG00000005622	RRP1B	100	56.506	Chinchilla_lanigera
ENSSHAG00000017789	RRP1B	100	65.183	ENSCSAG00000007961	RRP1B	100	65.183	Chlorocebus_sabaeus
ENSSHAG00000017789	RRP1B	50	61.979	ENSCHOG00000002426	-	55	66.071	Choloepus_hoffmanni
ENSSHAG00000017789	RRP1B	99	58.483	ENSCPBG00000010310	RRP1B	99	57.259	Chrysemys_picta_bellii
ENSSHAG00000017789	RRP1B	100	65.621	ENSCANG00000040952	RRP1B	100	65.621	Colobus_angolensis_palliatus
ENSSHAG00000017789	RRP1B	100	58.191	ENSCGRG00001010889	-	100	58.191	Cricetulus_griseus_chok1gshd
ENSSHAG00000017789	RRP1B	100	57.929	ENSCGRG00001023882	-	100	57.743	Cricetulus_griseus_chok1gshd
ENSSHAG00000017789	RRP1B	53	48.201	ENSCGRG00001011920	Rrp1	79	50.847	Cricetulus_griseus_chok1gshd
ENSSHAG00000017789	RRP1B	94	57.361	ENSCGRG00000001553	Rrp1b	97	57.282	Cricetulus_griseus_crigri
ENSSHAG00000017789	RRP1B	53	48.201	ENSCGRG00000008915	Rrp1	79	50.847	Cricetulus_griseus_crigri
ENSSHAG00000017789	RRP1B	59	53.763	ENSCSEG00000020711	-	77	53.763	Cynoglossus_semilaevis
ENSSHAG00000017789	RRP1B	60	46.532	ENSDARG00000103337	rrp1	61	45.429	Danio_rerio
ENSSHAG00000017789	RRP1B	100	61.299	ENSDNOG00000032774	RRP1B	100	60.938	Dasypus_novemcinctus
ENSSHAG00000017789	RRP1B	58	47.872	ENSDNOG00000019880	RRP1	75	55.942	Dasypus_novemcinctus
ENSSHAG00000017789	RRP1B	93	55.355	ENSDORG00000005496	Rrp1b	100	54.798	Dipodomys_ordii
ENSSHAG00000017789	RRP1B	100	55.294	ENSETEG00000019489	RRP1B	100	54.902	Echinops_telfairi
ENSSHAG00000017789	RRP1B	100	64.583	ENSEASG00005001687	RRP1B	100	64.583	Equus_asinus_asinus
ENSSHAG00000017789	RRP1B	100	64.752	ENSECAG00000018018	RRP1B	100	64.974	Equus_caballus
ENSSHAG00000017789	RRP1B	64	52.344	ENSELUG00000015885	-	89	48.640	Esox_lucius
ENSSHAG00000017789	RRP1B	100	61.961	ENSFCAG00000010272	RRP1B	100	61.558	Felis_catus
ENSSHAG00000017789	RRP1B	54	49.024	ENSFCAG00000008434	RRP1	74	54.572	Felis_catus
ENSSHAG00000017789	RRP1B	92	50.833	ENSFALG00000002024	RRP1B	100	50.488	Ficedula_albicollis
ENSSHAG00000017789	RRP1B	96	55.722	ENSFDAG00000010899	RRP1B	96	54.980	Fukomys_damarensis
ENSSHAG00000017789	RRP1B	55	46.778	ENSFDAG00000013728	RRP1	76	53.179	Fukomys_damarensis
ENSSHAG00000017789	RRP1B	55	51.961	ENSFHEG00000016314	-	50	52.941	Fundulus_heteroclitus
ENSSHAG00000017789	RRP1B	62	45.706	ENSGMOG00000001953	-	66	46.429	Gadus_morhua
ENSSHAG00000017789	RRP1B	100	52.760	ENSGALG00000035696	RRP1B	100	53.342	Gallus_gallus
ENSSHAG00000017789	RRP1B	65	51.163	ENSGACG00000001438	rrp1	73	47.552	Gasterosteus_aculeatus
ENSSHAG00000017789	RRP1B	100	58.184	ENSGAGG00000000375	RRP1B	100	57.455	Gopherus_agassizii
ENSSHAG00000017789	RRP1B	100	65.882	ENSGGOG00000012069	RRP1B	100	65.882	Gorilla_gorilla
ENSSHAG00000017789	RRP1B	99	57.422	ENSHGLG00000004968	RRP1B	100	57.405	Heterocephalus_glaber_female
ENSSHAG00000017789	RRP1B	75	66.364	ENSHGLG00100002232	RRP1B	97	52.115	Heterocephalus_glaber_male
ENSSHAG00000017789	RRP1B	65	44.961	ENSHCOG00000018388	-	62	44.961	Hippocampus_comes
ENSSHAG00000017789	RRP1B	63	47.425	ENSIPUG00000000673	-	71	46.883	Ictalurus_punctatus
ENSSHAG00000017789	RRP1B	51	51.538	ENSSTOG00000011116	RRP1	76	55.294	Ictidomys_tridecemlineatus
ENSSHAG00000017789	RRP1B	99	60.795	ENSSTOG00000011790	RRP1B	96	60.995	Ictidomys_tridecemlineatus
ENSSHAG00000017789	RRP1B	100	53.677	ENSJJAG00000021279	Rrp1b	100	53.925	Jaculus_jaculus
ENSSHAG00000017789	RRP1B	60	49.600	ENSKMAG00000005539	rrp1	71	49.600	Kryptolebias_marmoratus
ENSSHAG00000017789	RRP1B	89	61.550	ENSLAFG00000000766	RRP1B	100	61.167	Loxodonta_africana
ENSSHAG00000017789	RRP1B	100	65.535	ENSMFAG00000039152	RRP1B	100	65.535	Macaca_fascicularis
ENSSHAG00000017789	RRP1B	100	63.577	ENSMMUG00000000104	RRP1B	100	63.577	Macaca_mulatta
ENSSHAG00000017789	RRP1B	100	65.666	ENSMNEG00000034269	RRP1B	100	65.666	Macaca_nemestrina
ENSSHAG00000017789	RRP1B	94	64.454	ENSMLEG00000040044	RRP1B	99	64.454	Mandrillus_leucophaeus
ENSSHAG00000017789	RRP1B	57	60.277	ENSMGAG00000014591	RRP1B	100	52.046	Meleagris_gallopavo
ENSSHAG00000017789	RRP1B	100	55.352	ENSMAUG00000021508	Rrp1b	100	55.294	Mesocricetus_auratus
ENSSHAG00000017789	RRP1B	100	64.921	ENSMICG00000004686	RRP1B	100	65.052	Microcebus_murinus
ENSSHAG00000017789	RRP1B	100	53.655	ENSMOCG00000001117	Rrp1b	100	53.655	Microtus_ochrogaster
ENSSHAG00000017789	RRP1B	100	88.583	ENSMODG00000021033	RRP1B	100	88.583	Monodelphis_domestica
ENSSHAG00000017789	RRP1B	64	48.065	ENSMODG00000021036	-	52	58.857	Monodelphis_domestica
ENSSHAG00000017789	RRP1B	100	54.128	MGP_CAROLIEiJ_G0021376	Rrp1b	100	53.806	Mus_caroli
ENSSHAG00000017789	RRP1B	100	53.010	ENSMUSG00000058392	Rrp1b	100	52.880	Mus_musculus
ENSSHAG00000017789	RRP1B	100	54.199	MGP_PahariEiJ_G0023695	Rrp1b	100	54.068	Mus_pahari
ENSSHAG00000017789	RRP1B	100	54.450	MGP_SPRETEiJ_G0022290	Rrp1b	100	54.188	Mus_spretus
ENSSHAG00000017789	RRP1B	84	56.143	ENSMPUG00000009810	RRP1B	99	56.610	Mustela_putorius_furo
ENSSHAG00000017789	RRP1B	99	63.885	ENSMLUG00000007738	RRP1B	99	64.062	Myotis_lucifugus
ENSSHAG00000017789	RRP1B	100	55.685	ENSNGAG00000021073	Rrp1b	100	56.005	Nannospalax_galili
ENSSHAG00000017789	RRP1B	100	63.922	ENSNLEG00000001490	RRP1B	100	63.613	Nomascus_leucogenys
ENSSHAG00000017789	RRP1B	77	99.160	ENSMEUG00000003226	-	89	99.160	Notamacropus_eugenii
ENSSHAG00000017789	RRP1B	100	52.140	ENSODEG00000013177	RRP1B	100	51.429	Octodon_degus
ENSSHAG00000017789	RRP1B	99	56.974	ENSOANG00000006470	RRP1B	99	57.349	Ornithorhynchus_anatinus
ENSSHAG00000017789	RRP1B	94	50.833	ENSOCUG00000025931	RRP1B	100	50.139	Oryctolagus_cuniculus
ENSSHAG00000017789	RRP1B	93	48.919	ENSORLG00020007199	-	81	50.141	Oryzias_latipes_hni
ENSSHAG00000017789	RRP1B	67	48.794	ENSORLG00015004425	-	62	50.276	Oryzias_latipes_hsok
ENSSHAG00000017789	RRP1B	71	47.028	ENSOMEG00000016910	-	56	49.008	Oryzias_melastigma
ENSSHAG00000017789	RRP1B	98	55.570	ENSOGAG00000009872	RRP1B	93	73.554	Otolemur_garnettii
ENSSHAG00000017789	RRP1B	94	57.815	ENSOARG00000011314	RRP1B	100	59.059	Ovis_aries
ENSSHAG00000017789	RRP1B	94	64.681	ENSPPAG00000035319	RRP1B	99	64.592	Pan_paniscus
ENSSHAG00000017789	RRP1B	100	61.307	ENSPPRG00000010356	RRP1B	100	61.438	Panthera_pardus
ENSSHAG00000017789	RRP1B	54	48.537	ENSPPRG00000010656	RRP1	75	53.529	Panthera_pardus
ENSSHAG00000017789	RRP1B	75	67.532	ENSPTIG00000016894	RRP1B	88	68.707	Panthera_tigris_altaica
ENSSHAG00000017789	RRP1B	100	66.144	ENSPTRG00000013958	RRP1B	100	66.144	Pan_troglodytes
ENSSHAG00000017789	RRP1B	52	49.635	ENSPANG00000015097	RRP1	73	54.839	Papio_anubis
ENSSHAG00000017789	RRP1B	100	65.927	ENSPANG00000011090	RRP1B	100	65.927	Papio_anubis
ENSSHAG00000017789	RRP1B	99	58.831	ENSPSIG00000008152	RRP1B	96	57.712	Pelodiscus_sinensis
ENSSHAG00000017789	RRP1B	100	55.570	ENSPEMG00000022490	Rrp1b	100	55.512	Peromyscus_maniculatus_bairdii
ENSSHAG00000017789	RRP1B	100	92.913	ENSPCIG00000015513	RRP1B	100	92.913	Phascolarctos_cinereus
ENSSHAG00000017789	RRP1B	79	45.101	ENSPCIG00000015523	-	82	56.883	Phascolarctos_cinereus
ENSSHAG00000017789	RRP1B	59	41.394	ENSPLAG00000016684	-	51	47.887	Poecilia_latipinna
ENSSHAG00000017789	RRP1B	83	46.757	ENSPMEG00000007042	-	76	47.887	Poecilia_mexicana
ENSSHAG00000017789	RRP1B	91	45.478	ENSPREG00000015673	-	58	47.486	Poecilia_reticulata
ENSSHAG00000017789	RRP1B	53	50.121	ENSPPYG00000011474	RRP1	74	55.263	Pongo_abelii
ENSSHAG00000017789	RRP1B	100	66.144	ENSPPYG00000011470	RRP1B	100	66.144	Pongo_abelii
ENSSHAG00000017789	RRP1B	85	80.000	ENSPCAG00000013723	RRP1B	91	80.000	Procavia_capensis
ENSSHAG00000017789	RRP1B	100	65.183	ENSPCOG00000017927	RRP1B	100	65.183	Propithecus_coquereli
ENSSHAG00000017789	RRP1B	99	57.908	ENSPVAG00000001436	RRP1B	99	58.954	Pteropus_vampyrus
ENSSHAG00000017789	RRP1B	100	55.381	ENSRNOG00000001194	Rrp1b	100	55.222	Rattus_norvegicus
ENSSHAG00000017789	RRP1B	100	61.830	ENSRBIG00000041689	RRP1B	100	61.830	Rhinopithecus_bieti
ENSSHAG00000017789	RRP1B	100	65.752	ENSRROG00000031499	RRP1B	100	65.752	Rhinopithecus_roxellana
ENSSHAG00000017789	RRP1B	94	60.614	ENSSBOG00000034727	RRP1B	99	60.614	Saimiri_boliviensis_boliviensis
ENSSHAG00000017789	RRP1B	67	47.861	ENSSMAG00000016847	-	86	46.240	Scophthalmus_maximus
ENSSHAG00000017789	RRP1B	64	48.396	ENSSDUG00000000551	-	53	48.509	Seriola_dumerili
ENSSHAG00000017789	RRP1B	64	48.663	ENSSLDG00000002538	-	53	49.587	Seriola_lalandi_dorsalis
ENSSHAG00000017789	RRP1B	69	60.702	ENSSARG00000003108	-	75	60.279	Sorex_araneus
ENSSHAG00000017789	RRP1B	100	51.496	ENSSPUG00000002834	RRP1B	100	50.873	Sphenodon_punctatus
ENSSHAG00000017789	RRP1B	64	48.031	ENSSPAG00000005370	-	51	48.438	Stegastes_partitus
ENSSHAG00000017789	RRP1B	100	56.881	ENSSSCG00000021698	RRP1B	100	57.012	Sus_scrofa
ENSSHAG00000017789	RRP1B	70	47.191	ENSTNIG00000005053	rrp1	69	47.592	Tetraodon_nigroviridis
ENSSHAG00000017789	RRP1B	94	59.252	ENSTBEG00000000422	RRP1B	99	73.214	Tupaia_belangeri
ENSSHAG00000017789	RRP1B	100	59.608	ENSTTRG00000000723	RRP1B	100	60.000	Tursiops_truncatus
ENSSHAG00000017789	RRP1B	100	60.550	ENSUAMG00000026765	RRP1B	100	60.208	Ursus_americanus
ENSSHAG00000017789	RRP1B	62	75.940	ENSUMAG00000025510	RRP1B	90	74.556	Ursus_maritimus
ENSSHAG00000017789	RRP1B	94	62.050	ENSVVUG00000024509	RRP1B	99	61.773	Vulpes_vulpes
ENSSHAG00000017789	RRP1B	62	47.801	ENSXETG00000013683	rrp1b	69	47.214	Xenopus_tropicalis
ENSSHAG00000017789	RRP1B	100	36.408	ENSXMAG00000023123	-	100	35.971	Xiphophorus_maculatus