EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000017828 (Gene tree)
Gene ID: 100926709
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type and G-patch domain containing
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 6726 bases
Position: chrGL834659.1:3016392-3023117
Accession: 100926709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000021024	G-patch	PF01585.23	4.7e-13	1	1
ENSSHAP00000021023	G-patch	PF01585.23	4.7e-13	1	1
ENSSHAP00000021025	G-patch	PF01585.23	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000021193	-	1545	-	ENSSHAP00000021023	515 (aa)	-	G3X018
ENSSHAT00000021195	-	1548	-	ENSSHAP00000021025	515 (aa)	XP_003757609	G3X020
ENSSHAT00000021194	-	1536	-	ENSSHAP00000021024	512 (aa)	-	G3X019

Gene Model

Click here to download ENSSHAG00000017828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000017828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000017828	-	100	66.475	ENSG00000197114	ZGPAT	100	66.667	Homo_sapiens
ENSSHAG00000017828	-	100	53.890	ENSAPOG00000001732	zgpat	100	53.321	Acanthochromis_polyacanthus
ENSSHAG00000017828	-	100	69.084	ENSAMEG00000001752	-	100	69.466	Ailuropoda_melanoleuca
ENSSHAG00000017828	-	100	52.126	ENSACIG00000015939	zgpat	100	52.495	Amphilophus_citrinellus
ENSSHAG00000017828	-	100	53.977	ENSAOCG00000014437	zgpat	100	53.788	Amphiprion_ocellaris
ENSSHAG00000017828	-	100	53.788	ENSAPEG00000006555	zgpat	100	53.598	Amphiprion_percula
ENSSHAG00000017828	-	100	51.743	ENSATEG00000003346	zgpat	100	50.829	Anabas_testudineus
ENSSHAG00000017828	-	100	68.620	ENSAPLG00000014707	-	100	68.431	Anas_platyrhynchos
ENSSHAG00000017828	-	92	65.984	ENSACAG00000012278	-	100	65.369	Anolis_carolinensis
ENSSHAG00000017828	-	100	68.340	ENSANAG00000035708	ZGPAT	100	68.401	Aotus_nancymaae
ENSSHAG00000017828	-	100	52.328	ENSACLG00000013778	zgpat	100	52.390	Astatotilapia_calliptera
ENSSHAG00000017828	-	100	51.985	ENSAMXG00000018583	zgpat	100	52.345	Astyanax_mexicanus
ENSSHAG00000017828	-	100	68.190	ENSBTAG00000007498	ZGPAT	100	68.441	Bos_taurus
ENSSHAG00000017828	-	100	66.667	ENSCJAG00000010398	ZGPAT	100	68.015	Callithrix_jacchus
ENSSHAG00000017828	-	99	65.209	ENSCAFG00000013056	ZGPAT	99	65.085	Canis_familiaris
ENSSHAG00000017828	-	100	65.341	ENSCAFG00020001956	-	100	65.152	Canis_lupus_dingo
ENSSHAG00000017828	-	100	68.321	ENSCHIG00000026209	-	100	68.321	Capra_hircus
ENSSHAG00000017828	-	97	65.945	ENSTSYG00000000795	ZGPAT	97	65.945	Carlito_syrichta
ENSSHAG00000017828	-	62	55.215	ENSCAPG00000009466	-	100	55.215	Cavia_aperea
ENSSHAG00000017828	-	100	64.972	ENSCPOG00000014427	ZGPAT	100	64.972	Cavia_porcellus
ENSSHAG00000017828	-	100	68.015	ENSCCAG00000035441	ZGPAT	100	68.979	Cebus_capucinus
ENSSHAG00000017828	-	100	66.603	ENSCATG00000034076	ZGPAT	100	66.476	Cercocebus_atys
ENSSHAG00000017828	-	100	66.794	ENSCLAG00000004087	ZGPAT	100	67.366	Chinchilla_lanigera
ENSSHAG00000017828	-	100	64.140	ENSCSAG00000016628	ZGPAT	100	64.220	Chlorocebus_sabaeus
ENSSHAG00000017828	-	65	57.746	ENSCHOG00000013646	-	84	58.451	Choloepus_hoffmanni
ENSSHAG00000017828	-	100	67.222	ENSCPBG00000014736	-	99	67.407	Chrysemys_picta_bellii
ENSSHAG00000017828	-	100	66.288	ENSCANG00000041082	ZGPAT	100	66.286	Colobus_angolensis_palliatus
ENSSHAG00000017828	-	100	65.517	ENSCGRG00001011442	Zgpat	100	64.528	Cricetulus_griseus_chok1gshd
ENSSHAG00000017828	-	100	58.238	ENSCGRG00000014321	Zgpat	100	57.358	Cricetulus_griseus_crigri
ENSSHAG00000017828	-	100	51.233	ENSCSEG00000002301	zgpat	100	50.469	Cynoglossus_semilaevis
ENSSHAG00000017828	-	100	50.455	ENSCVAG00000007255	zgpat	100	50.455	Cyprinodon_variegatus
ENSSHAG00000017828	-	100	52.672	ENSDARG00000027403	zgpat	100	53.053	Danio_rerio
ENSSHAG00000017828	-	100	66.793	ENSDNOG00000025874	-	100	66.983	Dasypus_novemcinctus
ENSSHAG00000017828	-	96	66.867	ENSDORG00000001360	Zgpat	100	66.333	Dipodomys_ordii
ENSSHAG00000017828	-	93	39.962	ENSEBUG00000009006	ZGPAT	99	39.962	Eptatretus_burgeri
ENSSHAG00000017828	-	100	60.911	ENSEASG00005023159	-	100	60.911	Equus_asinus_asinus
ENSSHAG00000017828	-	100	62.984	ENSECAG00000019674	-	100	62.791	Equus_caballus
ENSSHAG00000017828	-	100	52.974	ENSELUG00000003733	zgpat	100	52.974	Esox_lucius
ENSSHAG00000017828	-	100	67.495	ENSFCAG00000001173	-	100	68.199	Felis_catus
ENSSHAG00000017828	-	100	67.035	ENSFALG00000005924	-	100	67.587	Ficedula_albicollis
ENSSHAG00000017828	-	100	66.160	ENSFDAG00000002974	ZGPAT	100	66.540	Fukomys_damarensis
ENSSHAG00000017828	-	100	53.645	ENSFHEG00000009966	zgpat	100	53.271	Fundulus_heteroclitus
ENSSHAG00000017828	-	100	65.162	ENSGALG00000006092	-	100	67.706	Gallus_gallus
ENSSHAG00000017828	-	100	51.402	ENSGAFG00000020149	zgpat	100	51.119	Gambusia_affinis
ENSSHAG00000017828	-	100	51.859	ENSGACG00000004662	zgpat	100	50.554	Gasterosteus_aculeatus
ENSSHAG00000017828	-	100	66.605	ENSGAGG00000019510	-	99	66.914	Gopherus_agassizii
ENSSHAG00000017828	-	100	64.312	ENSGGOG00000004801	ZGPAT	100	64.498	Gorilla_gorilla
ENSSHAG00000017828	-	100	52.799	ENSHBUG00000010362	zgpat	100	52.834	Haplochromis_burtoni
ENSSHAG00000017828	-	100	63.401	ENSHGLG00000014870	ZGPAT	100	65.291	Heterocephalus_glaber_female
ENSSHAG00000017828	-	100	65.283	ENSHGLG00100003927	ZGPAT	100	67.241	Heterocephalus_glaber_male
ENSSHAG00000017828	-	100	50.471	ENSHCOG00000004674	zgpat	100	50.749	Hippocampus_comes
ENSSHAG00000017828	-	100	51.028	ENSIPUG00000012890	zgpat	100	51.873	Ictalurus_punctatus
ENSSHAG00000017828	-	95	63.895	ENSSTOG00000011986	ZGPAT	100	64.431	Ictidomys_tridecemlineatus
ENSSHAG00000017828	-	100	61.686	ENSJJAG00000008007	-	100	61.686	Jaculus_jaculus
ENSSHAG00000017828	-	100	66.539	ENSJJAG00000018714	-	100	66.539	Jaculus_jaculus
ENSSHAG00000017828	-	100	50.841	ENSKMAG00000006523	zgpat	100	51.009	Kryptolebias_marmoratus
ENSSHAG00000017828	-	100	52.622	ENSLBEG00000016259	zgpat	100	52.230	Labrus_bergylta
ENSSHAG00000017828	-	100	57.875	ENSLACG00000002661	zgpat	100	57.615	Latimeria_chalumnae
ENSSHAG00000017828	-	100	58.333	ENSLOCG00000001659	zgpat	100	58.523	Lepisosteus_oculatus
ENSSHAG00000017828	-	100	66.411	ENSMFAG00000001467	ZGPAT	100	66.476	Macaca_fascicularis
ENSSHAG00000017828	-	100	66.411	ENSMMUG00000000171	ZGPAT	100	66.476	Macaca_mulatta
ENSSHAG00000017828	-	100	66.027	ENSMNEG00000019568	ZGPAT	100	66.095	Macaca_nemestrina
ENSSHAG00000017828	-	100	66.219	ENSMLEG00000035416	ZGPAT	100	66.286	Mandrillus_leucophaeus
ENSSHAG00000017828	-	100	52.700	ENSMAMG00000008266	zgpat	100	52.690	Mastacembelus_armatus
ENSSHAG00000017828	-	100	52.462	ENSMZEG00005021620	zgpat	100	52.230	Maylandia_zebra
ENSSHAG00000017828	-	100	64.516	ENSMGAG00000006823	-	100	64.337	Meleagris_gallopavo
ENSSHAG00000017828	-	100	65.326	ENSMAUG00000017248	Zgpat	100	64.083	Mesocricetus_auratus
ENSSHAG00000017828	-	100	67.939	ENSMICG00000033269	ZGPAT	100	67.176	Microcebus_murinus
ENSSHAG00000017828	-	100	65.259	ENSMOCG00000001324	Zgpat	100	64.083	Microtus_ochrogaster
ENSSHAG00000017828	-	100	53.016	ENSMMOG00000014951	zgpat	100	53.565	Mola_mola
ENSSHAG00000017828	-	93	93.684	ENSMODG00000017016	-	88	93.684	Monodelphis_domestica
ENSSHAG00000017828	-	100	50.857	ENSMALG00000006584	zgpat	100	50.376	Monopterus_albus
ENSSHAG00000017828	-	100	65.530	MGP_CAROLIEiJ_G0024806	Zgpat	100	65.038	Mus_caroli
ENSSHAG00000017828	-	100	65.714	ENSMUSG00000027582	Zgpat	100	65.028	Mus_musculus
ENSSHAG00000017828	-	100	65.275	MGP_PahariEiJ_G0026254	Zgpat	100	64.839	Mus_pahari
ENSSHAG00000017828	-	100	65.966	MGP_SPRETEiJ_G0025732	Zgpat	100	65.028	Mus_spretus
ENSSHAG00000017828	-	100	65.018	ENSMLUG00000005264	-	100	65.018	Myotis_lucifugus
ENSSHAG00000017828	-	100	51.498	ENSNBRG00000021521	zgpat	100	51.852	Neolamprologus_brichardi
ENSSHAG00000017828	-	100	63.806	ENSNLEG00000010146	ZGPAT	100	64.618	Nomascus_leucogenys
ENSSHAG00000017828	-	87	82.511	ENSMEUG00000011946	-	100	82.511	Notamacropus_eugenii
ENSSHAG00000017828	-	62	63.526	ENSOPRG00000002115	-	100	63.526	Ochotona_princeps
ENSSHAG00000017828	-	100	67.113	ENSODEG00000006562	ZGPAT	100	67.113	Octodon_degus
ENSSHAG00000017828	-	100	53.346	ENSONIG00000009365	zgpat	100	52.920	Oreochromis_niloticus
ENSSHAG00000017828	-	100	75.379	ENSOANG00000004932	-	100	75.379	Ornithorhynchus_anatinus
ENSSHAG00000017828	-	63	62.974	ENSOCUG00000008687	-	100	63.372	Oryctolagus_cuniculus
ENSSHAG00000017828	-	100	54.080	ENSORLG00000000880	zgpat	100	53.977	Oryzias_latipes
ENSSHAG00000017828	-	100	54.476	ENSORLG00020004339	zgpat	100	54.476	Oryzias_latipes_hni
ENSSHAG00000017828	-	100	54.269	ENSORLG00015018532	zgpat	100	54.545	Oryzias_latipes_hsok
ENSSHAG00000017828	-	100	53.672	ENSOMEG00000014655	zgpat	100	53.558	Oryzias_melastigma
ENSSHAG00000017828	-	100	67.297	ENSOGAG00000034509	ZGPAT	100	67.297	Otolemur_garnettii
ENSSHAG00000017828	-	100	63.339	ENSOARG00000010128	ZGPAT	100	63.091	Ovis_aries
ENSSHAG00000017828	-	100	65.326	ENSPPAG00000027831	ZGPAT	100	64.751	Pan_paniscus
ENSSHAG00000017828	-	100	68.069	ENSPPRG00000024151	-	100	68.199	Panthera_pardus
ENSSHAG00000017828	-	100	68.069	ENSPTIG00000020325	-	100	68.199	Panthera_tigris_altaica
ENSSHAG00000017828	-	100	65.326	ENSPTRG00000013750	ZGPAT	100	64.751	Pan_troglodytes
ENSSHAG00000017828	-	100	64.126	ENSPANG00000005904	ZGPAT	100	64.391	Papio_anubis
ENSSHAG00000017828	-	100	53.297	ENSPKIG00000012056	zgpat	100	54.645	Paramormyrops_kingsleyae
ENSSHAG00000017828	-	100	67.407	ENSPSIG00000015801	-	100	67.593	Pelodiscus_sinensis
ENSSHAG00000017828	-	100	53.371	ENSPMGG00000014856	zgpat	100	53.558	Periophthalmus_magnuspinnatus
ENSSHAG00000017828	-	100	64.559	ENSPEMG00000015676	Zgpat	100	64.461	Peromyscus_maniculatus_bairdii
ENSSHAG00000017828	-	100	95.922	ENSPCIG00000017922	-	100	95.922	Phascolarctos_cinereus
ENSSHAG00000017828	-	100	51.873	ENSPFOG00000010326	zgpat	100	52.150	Poecilia_formosa
ENSSHAG00000017828	-	100	52.622	ENSPLAG00000002135	zgpat	100	52.150	Poecilia_latipinna
ENSSHAG00000017828	-	100	52.060	ENSPMEG00000019064	zgpat	100	52.416	Poecilia_mexicana
ENSSHAG00000017828	-	100	51.873	ENSPREG00000010919	zgpat	100	51.206	Poecilia_reticulata
ENSSHAG00000017828	-	100	65.840	ENSPPYG00000011246	ZGPAT	100	66.858	Pongo_abelii
ENSSHAG00000017828	-	69	61.708	ENSPCAG00000001883	-	98	61.708	Procavia_capensis
ENSSHAG00000017828	-	100	68.631	ENSPCOG00000012369	ZGPAT	100	68.371	Propithecus_coquereli
ENSSHAG00000017828	-	100	65.769	ENSPVAG00000013489	-	100	65.769	Pteropus_vampyrus
ENSSHAG00000017828	-	100	52.919	ENSPNYG00000013216	zgpat	100	53.184	Pundamilia_nyererei
ENSSHAG00000017828	-	100	51.336	ENSPNAG00000012769	zgpat	100	51.992	Pygocentrus_nattereri
ENSSHAG00000017828	-	100	64.176	ENSRNOG00000014235	Zgpat	100	64.394	Rattus_norvegicus
ENSSHAG00000017828	-	100	66.667	ENSRBIG00000034134	ZGPAT	100	66.730	Rhinopithecus_bieti
ENSSHAG00000017828	-	100	66.603	ENSRROG00000039084	ZGPAT	100	66.667	Rhinopithecus_roxellana
ENSSHAG00000017828	-	100	67.568	ENSSBOG00000028752	ZGPAT	100	67.568	Saimiri_boliviensis_boliviensis
ENSSHAG00000017828	-	100	54.128	ENSSFOG00015000739	zgpat	100	53.176	Scleropages_formosus
ENSSHAG00000017828	-	100	52.060	ENSSMAG00000006646	zgpat	100	51.498	Scophthalmus_maximus
ENSSHAG00000017828	-	100	50.919	ENSSDUG00000014684	zgpat	100	50.817	Seriola_dumerili
ENSSHAG00000017828	-	100	52.045	ENSSLDG00000019446	zgpat	100	52.045	Seriola_lalandi_dorsalis
ENSSHAG00000017828	-	100	66.062	ENSSPUG00000018516	-	100	68.440	Sphenodon_punctatus
ENSSHAG00000017828	-	100	53.875	ENSSPAG00000022473	zgpat	100	54.461	Stegastes_partitus
ENSSHAG00000017828	-	100	66.541	ENSSSCG00000036595	-	100	67.490	Sus_scrofa
ENSSHAG00000017828	-	100	69.754	ENSTGUG00000007115	-	100	69.565	Taeniopygia_guttata
ENSSHAG00000017828	-	100	52.468	ENSTRUG00000010488	zgpat	100	52.022	Takifugu_rubripes
ENSSHAG00000017828	-	100	50.462	ENSTNIG00000004165	zgpat	100	51.311	Tetraodon_nigroviridis
ENSSHAG00000017828	-	71	69.624	ENSTTRG00000012223	-	71	69.624	Tursiops_truncatus
ENSSHAG00000017828	-	100	69.157	ENSUAMG00000009298	-	100	69.540	Ursus_americanus
ENSSHAG00000017828	-	100	69.423	ENSUMAG00000022033	-	100	69.808	Ursus_maritimus
ENSSHAG00000017828	-	100	65.698	ENSVVUG00000015014	-	100	65.698	Vulpes_vulpes
ENSSHAG00000017828	-	100	52.434	ENSXMAG00000004759	zgpat	100	52.150	Xiphophorus_maculatus