EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000018013 (Gene tree)
Gene ID: 100916599
Gene Symbol: SALL4
Alias: ZNF797|dJ1112F19.1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 16192 bases
Position: chrGL834668.1:3178532-3194723
Accession: 100916599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000021252	zf-C2H2	PF00096.26	9.7e-25	1	6
ENSSHAP00000021252	zf-C2H2	PF00096.26	9.7e-25	2	6
ENSSHAP00000021252	zf-C2H2	PF00096.26	9.7e-25	3	6
ENSSHAP00000021252	zf-C2H2	PF00096.26	9.7e-25	4	6
ENSSHAP00000021252	zf-C2H2	PF00096.26	9.7e-25	5	6
ENSSHAP00000021252	zf-C2H2	PF00096.26	9.7e-25	6	6
ENSSHAP00000021253	zf-C2H2	PF00096.26	5e-17	1	4
ENSSHAP00000021253	zf-C2H2	PF00096.26	5e-17	2	4
ENSSHAP00000021253	zf-C2H2	PF00096.26	5e-17	3	4
ENSSHAP00000021253	zf-C2H2	PF00096.26	5e-17	4	4
ENSSHAP00000021252	zf-met	PF12874.7	6.6e-12	1	1
ENSSHAP00000021253	zf-met	PF12874.7	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000021425	SALL4-202	5212	-	ENSSHAP00000021253	1153 (aa)	-	G3X0P8
ENSSHAT00000021424	SALL4-201	6143	-	ENSSHAP00000021252	1151 (aa)	XP_023350285	G3X0P7

Gene Model

Click here to download ENSSHAG00000018013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000018013	SALL4	96	63.462	ENSSHAG00000009477	SALL1	92	63.462
ENSSHAG00000018013	SALL4	55	44.444	ENSSHAG00000003090	-	79	51.020
ENSSHAG00000018013	SALL4	96	63.462	ENSSHAG00000015872	SALL3	96	63.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018013	SALL4	90	72.512	ENSG00000101115	SALL4	99	72.512	Homo_sapiens
ENSSHAG00000018013	SALL4	92	65.385	ENSAPOG00000002465	sall4	99	65.385	Acanthochromis_polyacanthus
ENSSHAG00000018013	SALL4	95	71.564	ENSAMEG00000013250	-	100	71.564	Ailuropoda_melanoleuca
ENSSHAG00000018013	SALL4	90	65.385	ENSACIG00000017298	sall4	99	65.385	Amphilophus_citrinellus
ENSSHAG00000018013	SALL4	92	65.385	ENSAOCG00000023678	sall4	99	65.385	Amphiprion_ocellaris
ENSSHAG00000018013	SALL4	92	65.385	ENSAPEG00000000751	sall4	99	65.385	Amphiprion_percula
ENSSHAG00000018013	SALL4	92	65.385	ENSATEG00000024480	sall4	99	65.385	Anabas_testudineus
ENSSHAG00000018013	SALL4	89	80.841	ENSAPLG00000006498	SALL4	96	80.841	Anas_platyrhynchos
ENSSHAG00000018013	SALL4	90	74.888	ENSACAG00000012748	SALL4	97	74.888	Anolis_carolinensis
ENSSHAG00000018013	SALL4	90	73.460	ENSANAG00000023352	SALL4	99	73.460	Aotus_nancymaae
ENSSHAG00000018013	SALL4	91	65.385	ENSACLG00000017851	sall4	96	65.385	Astatotilapia_calliptera
ENSSHAG00000018013	SALL4	88	65.385	ENSAMXG00000001254	sall4	95	65.385	Astyanax_mexicanus
ENSSHAG00000018013	SALL4	95	70.142	ENSBTAG00000003101	SALL4	100	70.142	Bos_taurus
ENSSHAG00000018013	SALL4	71	73.460	ENSCJAG00000000591	SALL4	97	73.460	Callithrix_jacchus
ENSSHAG00000018013	SALL4	95	71.564	ENSCAFG00000011738	-	100	71.564	Canis_familiaris
ENSSHAG00000018013	SALL4	95	71.564	ENSCAFG00020021870	SALL4	100	71.564	Canis_lupus_dingo
ENSSHAG00000018013	SALL4	95	71.090	ENSCHIG00000026270	SALL4	100	71.090	Capra_hircus
ENSSHAG00000018013	SALL4	89	72.986	ENSTSYG00000007359	SALL4	99	72.986	Carlito_syrichta
ENSSHAG00000018013	SALL4	86	67.773	ENSCAPG00000012135	SALL4	95	67.773	Cavia_aperea
ENSSHAG00000018013	SALL4	97	55.242	ENSCCAG00000029512	-	100	65.445	Cebus_capucinus
ENSSHAG00000018013	SALL4	90	72.038	ENSCATG00000030757	SALL4	99	72.038	Cercocebus_atys
ENSSHAG00000018013	SALL4	95	67.773	ENSCLAG00000010479	SALL4	100	67.773	Chinchilla_lanigera
ENSSHAG00000018013	SALL4	90	72.038	ENSCSAG00000015269	SALL4	99	72.038	Chlorocebus_sabaeus
ENSSHAG00000018013	SALL4	89	82.710	ENSCPBG00000014995	SALL4	97	82.407	Chrysemys_picta_bellii
ENSSHAG00000018013	SALL4	90	72.038	ENSCANG00000036463	SALL4	99	72.038	Colobus_angolensis_palliatus
ENSSHAG00000018013	SALL4	89	63.507	ENSCGRG00001019569	Sall4	100	63.507	Cricetulus_griseus_chok1gshd
ENSSHAG00000018013	SALL4	89	63.507	ENSCGRG00000000462	Sall4	100	76.543	Cricetulus_griseus_crigri
ENSSHAG00000018013	SALL4	92	59.615	ENSCSEG00000014604	sall4	99	59.615	Cynoglossus_semilaevis
ENSSHAG00000018013	SALL4	90	62.121	ENSCVAG00000010815	sall4	95	62.437	Cyprinodon_variegatus
ENSSHAG00000018013	SALL4	90	61.000	ENSDARG00000044485	sall4	98	61.000	Danio_rerio
ENSSHAG00000018013	SALL4	97	59.111	ENSDNOG00000040633	SALL4	100	62.891	Dasypus_novemcinctus
ENSSHAG00000018013	SALL4	88	63.033	ENSDORG00000012841	Sall4	100	88.158	Dipodomys_ordii
ENSSHAG00000018013	SALL4	65	68.000	ENSETEG00000012475	-	64	68.000	Echinops_telfairi
ENSSHAG00000018013	SALL4	95	70.142	ENSECAG00000018533	SALL4	100	70.142	Equus_caballus
ENSSHAG00000018013	SALL4	88	68.075	ENSEEUG00000003649	SALL4	98	68.075	Erinaceus_europaeus
ENSSHAG00000018013	SALL4	90	65.385	ENSELUG00000005696	sall4	97	65.385	Esox_lucius
ENSSHAG00000018013	SALL4	95	70.616	ENSFCAG00000002822	SALL4	99	70.616	Felis_catus
ENSSHAG00000018013	SALL4	97	68.875	ENSFALG00000013149	SALL4	96	72.770	Ficedula_albicollis
ENSSHAG00000018013	SALL4	95	68.246	ENSFDAG00000017812	SALL4	100	68.246	Fukomys_damarensis
ENSSHAG00000018013	SALL4	90	61.692	ENSFHEG00000014187	sall4	95	61.692	Fundulus_heteroclitus
ENSSHAG00000018013	SALL4	92	62.827	ENSGMOG00000003822	sall4	95	62.887	Gadus_morhua
ENSSHAG00000018013	SALL4	89	78.505	ENSGALG00000041365	SALL4	96	78.505	Gallus_gallus
ENSSHAG00000018013	SALL4	89	65.385	ENSGAFG00000019925	sall4	96	65.385	Gambusia_affinis
ENSSHAG00000018013	SALL4	88	65.385	ENSGACG00000011124	sall4	94	65.385	Gasterosteus_aculeatus
ENSSHAG00000018013	SALL4	89	82.710	ENSGAGG00000002297	SALL4	96	82.710	Gopherus_agassizii
ENSSHAG00000018013	SALL4	90	72.512	ENSGGOG00000001832	SALL4	99	72.512	Gorilla_gorilla
ENSSHAG00000018013	SALL4	90	65.385	ENSHBUG00000007327	sall4	96	65.385	Haplochromis_burtoni
ENSSHAG00000018013	SALL4	92	67.773	ENSHGLG00000009043	SALL4	96	67.773	Heterocephalus_glaber_female
ENSSHAG00000018013	SALL4	92	67.773	ENSHGLG00100002722	SALL4	96	67.773	Heterocephalus_glaber_male
ENSSHAG00000018013	SALL4	89	65.385	ENSHCOG00000008519	sall4	96	65.385	Hippocampus_comes
ENSSHAG00000018013	SALL4	88	65.385	ENSIPUG00000019170	sall4	96	65.385	Ictalurus_punctatus
ENSSHAG00000018013	SALL4	64	63.786	ENSSTOG00000025002	SALL4	100	84.507	Ictidomys_tridecemlineatus
ENSSHAG00000018013	SALL4	95	68.246	ENSJJAG00000020688	Sall4	99	85.915	Jaculus_jaculus
ENSSHAG00000018013	SALL4	90	63.265	ENSKMAG00000002501	sall4	97	63.265	Kryptolebias_marmoratus
ENSSHAG00000018013	SALL4	94	59.615	ENSLBEG00000019951	sall4	99	59.615	Labrus_bergylta
ENSSHAG00000018013	SALL4	91	54.630	ENSLACG00000013898	SALL4	100	66.667	Latimeria_chalumnae
ENSSHAG00000018013	SALL4	90	71.000	ENSLOCG00000002427	sall4	95	71.000	Lepisosteus_oculatus
ENSSHAG00000018013	SALL4	95	72.038	ENSLAFG00000004309	SALL4	100	72.038	Loxodonta_africana
ENSSHAG00000018013	SALL4	90	72.038	ENSMFAG00000027169	SALL4	99	72.038	Macaca_fascicularis
ENSSHAG00000018013	SALL4	83	72.038	ENSMMUG00000003870	SALL4	99	72.038	Macaca_mulatta
ENSSHAG00000018013	SALL4	83	72.038	ENSMNEG00000035995	SALL4	99	72.038	Macaca_nemestrina
ENSSHAG00000018013	SALL4	90	72.512	ENSMLEG00000030467	SALL4	99	72.512	Mandrillus_leucophaeus
ENSSHAG00000018013	SALL4	91	65.385	ENSMAMG00000005223	sall4	99	65.385	Mastacembelus_armatus
ENSSHAG00000018013	SALL4	90	65.385	ENSMZEG00005023418	sall4	96	65.385	Maylandia_zebra
ENSSHAG00000018013	SALL4	75	67.319	ENSMGAG00000009344	SALL4	100	66.830	Meleagris_gallopavo
ENSSHAG00000018013	SALL4	89	64.455	ENSMAUG00000015814	Sall4	100	70.455	Mesocricetus_auratus
ENSSHAG00000018013	SALL4	89	73.460	ENSMICG00000000027	SALL4	99	73.460	Microcebus_murinus
ENSSHAG00000018013	SALL4	89	69.340	ENSMOCG00000018245	Sall4	100	83.562	Microtus_ochrogaster
ENSSHAG00000018013	SALL4	90	65.385	ENSMMOG00000014929	sall4	96	65.385	Mola_mola
ENSSHAG00000018013	SALL4	100	87.824	ENSMODG00000016387	SALL4	100	87.651	Monodelphis_domestica
ENSSHAG00000018013	SALL4	91	60.377	ENSMALG00000018709	sall4	99	60.377	Monopterus_albus
ENSSHAG00000018013	SALL4	88	65.306	MGP_CAROLIEiJ_G0024723	Sall4	100	86.111	Mus_caroli
ENSSHAG00000018013	SALL4	88	64.796	ENSMUSG00000027547	Sall4	100	86.111	Mus_musculus
ENSSHAG00000018013	SALL4	88	62.019	MGP_PahariEiJ_G0026164	Sall4	100	86.111	Mus_pahari
ENSSHAG00000018013	SALL4	88	64.286	MGP_SPRETEiJ_G0025643	Sall4	100	86.111	Mus_spretus
ENSSHAG00000018013	SALL4	95	71.090	ENSMPUG00000017543	SALL4	96	71.090	Mustela_putorius_furo
ENSSHAG00000018013	SALL4	87	66.176	ENSMLUG00000008405	-	98	66.176	Myotis_lucifugus
ENSSHAG00000018013	SALL4	87	71.292	ENSMLUG00000007060	-	100	71.292	Myotis_lucifugus
ENSSHAG00000018013	SALL4	89	51.724	ENSMLUG00000028073	-	99	51.724	Myotis_lucifugus
ENSSHAG00000018013	SALL4	89	69.340	ENSNGAG00000017833	Sall4	99	69.340	Nannospalax_galili
ENSSHAG00000018013	SALL4	91	65.385	ENSNBRG00000001829	sall4	99	65.385	Neolamprologus_brichardi
ENSSHAG00000018013	SALL4	90	72.512	ENSNLEG00000007013	SALL4	99	72.512	Nomascus_leucogenys
ENSSHAG00000018013	SALL4	76	95.714	ENSMEUG00000005793	-	99	95.714	Notamacropus_eugenii
ENSSHAG00000018013	SALL4	92	63.359	ENSOPRG00000011640	SALL4	100	63.359	Ochotona_princeps
ENSSHAG00000018013	SALL4	92	65.385	ENSONIG00000016557	sall4	99	65.385	Oreochromis_niloticus
ENSSHAG00000018013	SALL4	90	84.906	ENSOANG00000008667	SALL4	94	84.507	Ornithorhynchus_anatinus
ENSSHAG00000018013	SALL4	88	64.463	ENSOCUG00000011797	SALL4	98	64.463	Oryctolagus_cuniculus
ENSSHAG00000018013	SALL4	88	65.385	ENSORLG00000016130	sall4	95	65.385	Oryzias_latipes
ENSSHAG00000018013	SALL4	90	65.385	ENSORLG00020007339	sall4	96	65.385	Oryzias_latipes_hni
ENSSHAG00000018013	SALL4	90	65.385	ENSORLG00015002265	sall4	96	65.385	Oryzias_latipes_hsok
ENSSHAG00000018013	SALL4	88	65.385	ENSOMEG00000017344	sall4	94	62.437	Oryzias_melastigma
ENSSHAG00000018013	SALL4	92	61.266	ENSOGAG00000013799	SALL4	99	61.887	Otolemur_garnettii
ENSSHAG00000018013	SALL4	90	63.507	ENSOARG00000014570	SALL4	100	63.507	Ovis_aries
ENSSHAG00000018013	SALL4	90	72.512	ENSPPAG00000038064	SALL4	99	72.512	Pan_paniscus
ENSSHAG00000018013	SALL4	95	71.090	ENSPPRG00000008677	SALL4	99	71.090	Panthera_pardus
ENSSHAG00000018013	SALL4	90	72.512	ENSPTRG00000013631	SALL4	99	72.512	Pan_troglodytes
ENSSHAG00000018013	SALL4	83	72.038	ENSPANG00000021792	SALL4	99	72.038	Papio_anubis
ENSSHAG00000018013	SALL4	88	63.462	ENSPKIG00000007074	sall4	94	63.776	Paramormyrops_kingsleyae
ENSSHAG00000018013	SALL4	89	81.860	ENSPSIG00000009066	SALL4	97	81.481	Pelodiscus_sinensis
ENSSHAG00000018013	SALL4	91	59.615	ENSPMGG00000022551	sall4	99	59.615	Periophthalmus_magnuspinnatus
ENSSHAG00000018013	SALL4	90	67.773	ENSPEMG00000022706	Sall4	100	86.111	Peromyscus_maniculatus_bairdii
ENSSHAG00000018013	SALL4	100	92.121	ENSPCIG00000022838	SALL4	100	92.121	Phascolarctos_cinereus
ENSSHAG00000018013	SALL4	88	65.385	ENSPFOG00000001442	sall4	95	65.385	Poecilia_formosa
ENSSHAG00000018013	SALL4	88	65.385	ENSPLAG00000008760	sall4	95	65.385	Poecilia_latipinna
ENSSHAG00000018013	SALL4	88	65.385	ENSPMEG00000008497	sall4	95	65.385	Poecilia_mexicana
ENSSHAG00000018013	SALL4	90	65.385	ENSPREG00000021140	sall4	95	65.385	Poecilia_reticulata
ENSSHAG00000018013	SALL4	90	71.564	ENSPPYG00000011138	SALL4	99	71.564	Pongo_abelii
ENSSHAG00000018013	SALL4	97	55.986	ENSPCAG00000004726	SALL4	99	62.791	Procavia_capensis
ENSSHAG00000018013	SALL4	89	74.408	ENSPCOG00000016321	SALL4	99	74.408	Propithecus_coquereli
ENSSHAG00000018013	SALL4	84	71.831	ENSPVAG00000002075	SALL4	94	71.831	Pteropus_vampyrus
ENSSHAG00000018013	SALL4	91	65.385	ENSPNYG00000021738	sall4	99	65.385	Pundamilia_nyererei
ENSSHAG00000018013	SALL4	90	65.385	ENSPNAG00000020929	sall4	98	65.385	Pygocentrus_nattereri
ENSSHAG00000018013	SALL4	89	61.818	ENSRNOG00000050035	Sall4	99	61.818	Rattus_norvegicus
ENSSHAG00000018013	SALL4	90	72.038	ENSRBIG00000039876	SALL4	99	72.038	Rhinopithecus_bieti
ENSSHAG00000018013	SALL4	90	72.038	ENSRROG00000036585	SALL4	99	72.038	Rhinopithecus_roxellana
ENSSHAG00000018013	SALL4	90	72.512	ENSSBOG00000030011	SALL4	99	72.512	Saimiri_boliviensis_boliviensis
ENSSHAG00000018013	SALL4	92	61.244	ENSSFOG00015021075	sall4	98	61.538	Scleropages_formosus
ENSSHAG00000018013	SALL4	88	65.385	ENSSMAG00000019218	sall4	95	65.385	Scophthalmus_maximus
ENSSHAG00000018013	SALL4	90	65.385	ENSSDUG00000004657	sall4	97	65.385	Seriola_dumerili
ENSSHAG00000018013	SALL4	90	65.385	ENSSLDG00000004973	sall4	97	65.385	Seriola_lalandi_dorsalis
ENSSHAG00000018013	SALL4	92	65.385	ENSSPAG00000001978	sall4	99	65.385	Stegastes_partitus
ENSSHAG00000018013	SALL4	88	68.246	ENSSSCG00000007479	SALL4	98	68.246	Sus_scrofa
ENSSHAG00000018013	SALL4	91	65.385	ENSTRUG00000007410	sall4	99	65.385	Takifugu_rubripes
ENSSHAG00000018013	SALL4	90	65.385	ENSTNIG00000012460	sall4	98	65.385	Tetraodon_nigroviridis
ENSSHAG00000018013	SALL4	93	71.564	ENSTTRG00000007753	SALL4	99	71.564	Tursiops_truncatus
ENSSHAG00000018013	SALL4	95	71.564	ENSUAMG00000010113	SALL4	100	71.564	Ursus_americanus
ENSSHAG00000018013	SALL4	93	71.564	ENSUMAG00000024274	SALL4	99	71.564	Ursus_maritimus
ENSSHAG00000018013	SALL4	89	69.668	ENSXETG00000012326	sall4	97	69.668	Xenopus_tropicalis
ENSSHAG00000018013	SALL4	91	65.385	ENSXCOG00000015467	sall4	96	65.385	Xiphophorus_couchianus
ENSSHAG00000018013	SALL4	88	65.385	ENSXMAG00000012692	sall4	96	65.385	Xiphophorus_maculatus