EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000018106 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 37098 bases
Position: chrGL861665.1:3257523-3294620
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	1	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	2	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	3	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	4	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	5	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	6	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	7	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	8	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	9	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	10	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	11	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	12	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	13	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	14	15
ENSSHAP00000021363	zf-C2H2	PF00096.26	2.1e-79	15	15
ENSSHAP00000021363	zf-met	PF12874.7	6.2e-06	1	3
ENSSHAP00000021363	zf-met	PF12874.7	6.2e-06	2	3
ENSSHAP00000021363	zf-met	PF12874.7	6.2e-06	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000021536	-	2214	-	ENSSHAP00000021363	738 (aa)	-	G3X108

Gene Model

Click here to download ENSSHAG00000018106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000018106	-	99	38.874	ENSSHAG00000001415	-	99	38.874
ENSSHAG00000018106	-	75	48.485	ENSSHAG00000011347	ZNF668	96	48.485
ENSSHAG00000018106	-	67	41.667	ENSSHAG00000003850	ZIC2	51	41.667
ENSSHAG00000018106	-	87	43.548	ENSSHAG00000018373	ZFAT	63	43.548
ENSSHAG00000018106	-	75	33.984	ENSSHAG00000009882	ZBTB16	87	38.462
ENSSHAG00000018106	-	63	44.776	ENSSHAG00000012248	-	90	44.776
ENSSHAG00000018106	-	86	38.971	ENSSHAG00000004205	SNAI2	89	38.971
ENSSHAG00000018106	-	75	33.051	ENSSHAG00000016965	GTF3A	75	33.051
ENSSHAG00000018106	-	80	34.901	ENSSHAG00000011486	-	99	34.901
ENSSHAG00000018106	-	95	36.260	ENSSHAG00000003090	-	99	35.982
ENSSHAG00000018106	-	69	30.806	ENSSHAG00000006462	GFI1B	67	30.806
ENSSHAG00000018106	-	75	42.202	ENSSHAG00000016096	-	100	31.405
ENSSHAG00000018106	-	99	43.478	ENSSHAG00000011714	-	99	43.478
ENSSHAG00000018106	-	77	42.000	ENSSHAG00000014216	-	96	42.000
ENSSHAG00000018106	-	75	44.221	ENSSHAG00000008255	ZNF768	85	43.110
ENSSHAG00000018106	-	77	32.967	ENSSHAG00000018342	ZNF423	94	32.967
ENSSHAG00000018106	-	78	36.090	ENSSHAG00000002263	ZNF652	58	36.032
ENSSHAG00000018106	-	67	40.244	ENSSHAG00000004332	-	95	40.244
ENSSHAG00000018106	-	83	32.273	ENSSHAG00000018217	ZNF521	93	33.333
ENSSHAG00000018106	-	72	34.783	ENSSHAG00000011015	SNAI1	91	34.783
ENSSHAG00000018106	-	80	43.750	ENSSHAG00000013079	ZNF236	55	43.750
ENSSHAG00000018106	-	81	42.905	ENSSHAG00000003284	-	83	42.553
ENSSHAG00000018106	-	99	44.231	ENSSHAG00000011906	-	99	43.333
ENSSHAG00000018106	-	76	36.126	ENSSHAG00000003250	PRDM5	77	36.126

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018106	-	77	46.718	ENSACAG00000024898	-	99	46.718	Anolis_carolinensis
ENSSHAG00000018106	-	79	42.607	ENSACAG00000008664	-	72	42.324	Anolis_carolinensis
ENSSHAG00000018106	-	99	43.583	ENSACAG00000024956	-	94	43.750	Anolis_carolinensis
ENSSHAG00000018106	-	76	43.353	ENSAMXG00000025452	-	98	43.353	Astyanax_mexicanus
ENSSHAG00000018106	-	76	43.494	ENSAMXG00000036233	-	81	43.494	Astyanax_mexicanus
ENSSHAG00000018106	-	75	44.118	ENSAMXG00000038636	-	98	44.118	Astyanax_mexicanus
ENSSHAG00000018106	-	75	48.410	ENSAMXG00000038536	-	88	45.016	Astyanax_mexicanus
ENSSHAG00000018106	-	75	45.376	ENSAMXG00000034847	-	86	45.376	Astyanax_mexicanus
ENSSHAG00000018106	-	75	43.434	ENSAMXG00000032841	-	78	41.148	Astyanax_mexicanus
ENSSHAG00000018106	-	80	45.455	ENSAMXG00000034344	-	84	45.455	Astyanax_mexicanus
ENSSHAG00000018106	-	75	44.444	ENSAMXG00000038325	-	94	44.538	Astyanax_mexicanus
ENSSHAG00000018106	-	75	49.250	ENSAMXG00000010805	-	95	49.250	Astyanax_mexicanus
ENSSHAG00000018106	-	75	46.850	ENSAMXG00000042746	-	88	44.373	Astyanax_mexicanus
ENSSHAG00000018106	-	80	40.127	ENSAMXG00000035246	-	67	40.127	Astyanax_mexicanus
ENSSHAG00000018106	-	75	49.123	ENSAMXG00000042784	-	92	49.123	Astyanax_mexicanus
ENSSHAG00000018106	-	75	41.694	ENSBTAG00000038322	-	77	41.694	Bos_taurus
ENSSHAG00000018106	-	76	41.216	ENSCPBG00000013652	-	76	41.216	Chrysemys_picta_bellii
ENSSHAG00000018106	-	95	43.750	ENSCPBG00000008580	-	100	42.795	Chrysemys_picta_bellii
ENSSHAG00000018106	-	78	40.767	ENSCPBG00000001526	-	85	40.064	Chrysemys_picta_bellii
ENSSHAG00000018106	-	75	36.335	ENSCSAVG00000010960	-	100	35.625	Ciona_savignyi
ENSSHAG00000018106	-	75	40.523	ENSDNOG00000047495	-	79	40.523	Dasypus_novemcinctus
ENSSHAG00000018106	-	74	42.163	ENSEBUG00000011694	-	92	42.163	Eptatretus_burgeri
ENSSHAG00000018106	-	76	38.776	ENSEBUG00000015837	-	80	37.861	Eptatretus_burgeri
ENSSHAG00000018106	-	75	42.826	ENSEBUG00000012919	-	75	42.826	Eptatretus_burgeri
ENSSHAG00000018106	-	75	40.326	ENSEBUG00000002075	-	78	39.573	Eptatretus_burgeri
ENSSHAG00000018106	-	75	40.159	ENSEBUG00000008306	-	80	40.159	Eptatretus_burgeri
ENSSHAG00000018106	-	75	37.132	ENSEBUG00000014717	-	75	37.132	Eptatretus_burgeri
ENSSHAG00000018106	-	75	40.909	ENSEBUG00000011435	-	83	40.273	Eptatretus_burgeri
ENSSHAG00000018106	-	74	34.454	ENSEBUG00000013875	-	86	33.654	Eptatretus_burgeri
ENSSHAG00000018106	-	74	40.359	ENSEBUG00000005264	-	74	40.359	Eptatretus_burgeri
ENSSHAG00000018106	-	86	39.542	ENSEASG00005004469	-	95	39.542	Equus_asinus_asinus
ENSSHAG00000018106	-	75	36.559	ENSGMOG00000018506	-	100	34.615	Gadus_morhua
ENSSHAG00000018106	-	78	42.540	ENSGALG00000049609	-	56	42.540	Gallus_gallus
ENSSHAG00000018106	-	78	43.258	ENSGALG00000053507	-	80	43.258	Gallus_gallus
ENSSHAG00000018106	-	99	47.222	ENSGALG00000044069	-	82	47.207	Gallus_gallus
ENSSHAG00000018106	-	77	47.475	ENSGALG00000046336	-	99	47.475	Gallus_gallus
ENSSHAG00000018106	-	79	42.827	ENSGALG00000054325	-	99	44.444	Gallus_gallus
ENSSHAG00000018106	-	78	42.192	ENSGALG00000055127	-	69	42.192	Gallus_gallus
ENSSHAG00000018106	-	74	47.015	ENSGACG00000006283	-	95	47.015	Gasterosteus_aculeatus
ENSSHAG00000018106	-	76	47.588	ENSGAGG00000018885	-	65	47.588	Gopherus_agassizii
ENSSHAG00000018106	-	76	43.651	ENSGAGG00000011399	-	85	43.284	Gopherus_agassizii
ENSSHAG00000018106	-	75	44.444	ENSGAGG00000011366	-	92	44.444	Gopherus_agassizii
ENSSHAG00000018106	-	75	36.859	ENSHCOG00000018201	-	82	36.859	Hippocampus_comes
ENSSHAG00000018106	-	87	34.202	ENSIPUG00000012109	ZN12	72	34.202	Ictalurus_punctatus
ENSSHAG00000018106	-	75	44.750	ENSIPUG00000021515	-	94	39.711	Ictalurus_punctatus
ENSSHAG00000018106	-	95	47.059	ENSIPUG00000015468	-	95	42.535	Ictalurus_punctatus
ENSSHAG00000018106	-	75	36.000	ENSJJAG00000023633	Zfp672	91	36.750	Jaculus_jaculus
ENSSHAG00000018106	-	77	36.000	ENSLACG00000005264	-	98	36.000	Latimeria_chalumnae
ENSSHAG00000018106	-	99	43.603	ENSLACG00000022211	-	98	43.603	Latimeria_chalumnae
ENSSHAG00000018106	-	75	37.600	ENSLACG00000009005	-	100	36.025	Latimeria_chalumnae
ENSSHAG00000018106	-	77	40.453	ENSLOCG00000017864	-	100	40.385	Lepisosteus_oculatus
ENSSHAG00000018106	-	78	44.669	ENSMGAG00000013362	-	99	44.669	Meleagris_gallopavo
ENSSHAG00000018106	-	78	39.286	ENSMAUG00000009945	Zfp672	90	39.386	Mesocricetus_auratus
ENSSHAG00000018106	-	74	44.776	ENSMMOG00000003923	-	86	44.776	Mola_mola
ENSSHAG00000018106	-	99	46.182	ENSMODG00000001880	-	99	48.829	Monodelphis_domestica
ENSSHAG00000018106	-	99	48.141	ENSMODG00000010532	-	99	45.053	Monodelphis_domestica
ENSSHAG00000018106	-	99	44.737	MGP_CAROLIEiJ_G0030502	-	92	44.737	Mus_caroli
ENSSHAG00000018106	-	76	37.913	MGP_CAROLIEiJ_G0016391	Zfp672	94	37.681	Mus_caroli
ENSSHAG00000018106	-	99	43.784	ENSMUSG00000030823	9130019O22Rik	68	43.351	Mus_musculus
ENSSHAG00000018106	-	76	37.913	ENSMUSG00000049755	Zfp672	99	37.681	Mus_musculus
ENSSHAG00000018106	-	75	37.659	MGP_SPRETEiJ_G0017233	Zfp672	92	35.897	Mus_spretus
ENSSHAG00000018106	-	75	41.577	MGP_SPRETEiJ_G0031613	-	85	41.634	Mus_spretus
ENSSHAG00000018106	-	99	40.590	ENSNGAG00000015777	Zim1	95	40.590	Nannospalax_galili
ENSSHAG00000018106	-	75	36.269	ENSNBRG00000000708	-	95	38.356	Neolamprologus_brichardi
ENSSHAG00000018106	-	74	39.823	ENSNBRG00000007276	-	58	39.823	Neolamprologus_brichardi
ENSSHAG00000018106	-	75	46.923	ENSORLG00020001922	-	92	44.444	Oryzias_latipes_hni
ENSSHAG00000018106	-	74	46.281	ENSOMEG00000001598	-	72	46.281	Oryzias_melastigma
ENSSHAG00000018106	-	99	45.522	ENSPSIG00000013021	-	97	45.522	Pelodiscus_sinensis
ENSSHAG00000018106	-	99	44.562	ENSPSIG00000010248	-	94	44.562	Pelodiscus_sinensis
ENSSHAG00000018106	-	99	45.185	ENSPSIG00000004502	-	85	45.185	Pelodiscus_sinensis
ENSSHAG00000018106	-	75	43.953	ENSPSIG00000012650	-	79	43.953	Pelodiscus_sinensis
ENSSHAG00000018106	-	99	43.911	ENSPSIG00000005672	-	97	43.911	Pelodiscus_sinensis
ENSSHAG00000018106	-	75	37.380	ENSPSIG00000006586	-	99	38.226	Pelodiscus_sinensis
ENSSHAG00000018106	-	99	43.539	ENSPSIG00000005603	-	96	43.539	Pelodiscus_sinensis
ENSSHAG00000018106	-	99	43.810	ENSPSIG00000015459	-	96	43.810	Pelodiscus_sinensis
ENSSHAG00000018106	-	100	43.144	ENSPSIG00000010328	-	99	43.144	Pelodiscus_sinensis
ENSSHAG00000018106	-	76	48.718	ENSPSIG00000006790	-	94	48.718	Pelodiscus_sinensis
ENSSHAG00000018106	-	76	41.126	ENSPSIG00000000672	-	93	41.126	Pelodiscus_sinensis
ENSSHAG00000018106	-	99	45.385	ENSPSIG00000016380	-	96	45.385	Pelodiscus_sinensis
ENSSHAG00000018106	-	93	40.556	ENSPSIG00000003152	-	96	40.556	Pelodiscus_sinensis
ENSSHAG00000018106	-	78	40.945	ENSPREG00000002642	-	91	39.667	Poecilia_reticulata
ENSSHAG00000018106	-	74	46.341	ENSPNYG00000015486	-	59	46.341	Pundamilia_nyererei
ENSSHAG00000018106	-	75	48.205	ENSPNAG00000000088	-	92	48.205	Pygocentrus_nattereri
ENSSHAG00000018106	-	76	47.291	ENSPNAG00000018395	-	77	47.291	Pygocentrus_nattereri
ENSSHAG00000018106	-	75	38.325	ENSRNOG00000002713	Zfp672	90	38.325	Rattus_norvegicus
ENSSHAG00000018106	-	75	45.432	ENSSFOG00015019818	-	79	40.278	Scleropages_formosus
ENSSHAG00000018106	-	74	36.434	ENSSMAG00000004252	-	86	36.434	Scophthalmus_maximus
ENSSHAG00000018106	-	78	44.672	ENSSPUG00000004366	-	66	44.672	Sphenodon_punctatus
ENSSHAG00000018106	-	78	41.686	ENSSPUG00000010016	-	93	43.627	Sphenodon_punctatus
ENSSHAG00000018106	-	78	47.748	ENSSPAG00000021653	-	81	47.748	Stegastes_partitus
ENSSHAG00000018106	-	86	42.965	ENSTGUG00000015210	-	99	42.965	Taeniopygia_guttata
ENSSHAG00000018106	-	74	47.748	ENSTGUG00000018351	-	100	47.748	Taeniopygia_guttata
ENSSHAG00000018106	-	99	37.859	ENSTRUG00000022066	-	88	39.286	Takifugu_rubripes
ENSSHAG00000018106	-	77	39.030	ENSXETG00000031192	-	100	39.152	Xenopus_tropicalis
ENSSHAG00000018106	-	75	46.332	ENSXCOG00000006553	-	86	46.332	Xiphophorus_couchianus
ENSSHAG00000018106	-	83	40.183	ENSXMAG00000026680	-	99	40.183	Xiphophorus_maculatus