EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000018127 (Gene tree)
Gene ID: 100927604
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 12038 bases
Position: chrGL856832.1:3279874-3291911
Accession: 100927604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000021389	tRNA_int_end_N2	PF12928.7	4.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000021562	TSEN54-201	2713	-	ENSSHAP00000021389	542 (aa)	XP_003768516	G3X134

Gene Model

Click here to download ENSSHAG00000018127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018127	TSEN54	98	65.672	ENSG00000182173	TSEN54	100	81.944	Homo_sapiens
ENSSHAG00000018127	TSEN54	96	44.615	ENSAPOG00000009659	tsen54	99	42.989	Acanthochromis_polyacanthus
ENSSHAG00000018127	TSEN54	98	66.853	ENSAMEG00000009414	TSEN54	99	66.853	Ailuropoda_melanoleuca
ENSSHAG00000018127	TSEN54	96	44.530	ENSAOCG00000000152	tsen54	95	44.530	Amphiprion_ocellaris
ENSSHAG00000018127	TSEN54	96	44.338	ENSAPEG00000018931	tsen54	94	44.338	Amphiprion_percula
ENSSHAG00000018127	TSEN54	96	43.454	ENSATEG00000019860	tsen54	97	44.129	Anabas_testudineus
ENSSHAG00000018127	TSEN54	85	51.509	ENSAPLG00000009419	TSEN54	100	51.509	Anas_platyrhynchos
ENSSHAG00000018127	TSEN54	96	50.380	ENSACAG00000006714	TSEN54	98	51.238	Anolis_carolinensis
ENSSHAG00000018127	TSEN54	97	65.913	ENSANAG00000024061	TSEN54	100	65.082	Aotus_nancymaae
ENSSHAG00000018127	TSEN54	96	44.423	ENSACLG00000019800	tsen54	96	44.340	Astatotilapia_calliptera
ENSSHAG00000018127	TSEN54	96	46.947	ENSAMXG00000006546	tsen54	96	46.947	Astyanax_mexicanus
ENSSHAG00000018127	TSEN54	98	67.290	ENSBTAG00000000824	TSEN54	99	67.290	Bos_taurus
ENSSHAG00000018127	TSEN54	97	65.348	ENSCJAG00000014278	TSEN54	100	64.771	Callithrix_jacchus
ENSSHAG00000018127	TSEN54	100	66.789	ENSCAFG00000004798	TSEN54	100	66.789	Canis_familiaris
ENSSHAG00000018127	TSEN54	100	66.789	ENSCAFG00020000312	TSEN54	100	66.789	Canis_lupus_dingo
ENSSHAG00000018127	TSEN54	98	66.853	ENSCHIG00000019908	TSEN54	99	66.853	Capra_hircus
ENSSHAG00000018127	TSEN54	85	66.026	ENSTSYG00000037439	TSEN54	100	66.026	Carlito_syrichta
ENSSHAG00000018127	TSEN54	97	65.160	ENSCCAG00000036624	TSEN54	100	64.351	Cebus_capucinus
ENSSHAG00000018127	TSEN54	96	64.952	ENSCATG00000042877	TSEN54	99	65.056	Cercocebus_atys
ENSSHAG00000018127	TSEN54	96	64.952	ENSCLAG00000002924	TSEN54	99	64.925	Chinchilla_lanigera
ENSSHAG00000018127	TSEN54	98	65.112	ENSCSAG00000004809	TSEN54	99	65.056	Chlorocebus_sabaeus
ENSSHAG00000018127	TSEN54	96	56.333	ENSCPBG00000028071	TSEN54	98	56.333	Chrysemys_picta_bellii
ENSSHAG00000018127	TSEN54	98	65.177	ENSCANG00000028053	TSEN54	99	65.121	Colobus_angolensis_palliatus
ENSSHAG00000018127	TSEN54	98	64.673	ENSCGRG00001020029	Tsen54	99	64.673	Cricetulus_griseus_chok1gshd
ENSSHAG00000018127	TSEN54	84	62.582	ENSCGRG00000016289	Tsen54	100	62.582	Cricetulus_griseus_crigri
ENSSHAG00000018127	TSEN54	80	37.443	ENSCSEG00000020586	tsen54	99	37.443	Cynoglossus_semilaevis
ENSSHAG00000018127	TSEN54	80	43.448	ENSDARG00000036844	tsen54	99	44.138	Danio_rerio
ENSSHAG00000018127	TSEN54	98	66.105	ENSDNOG00000018452	TSEN54	99	66.105	Dasypus_novemcinctus
ENSSHAG00000018127	TSEN54	98	65.485	ENSDORG00000004073	Tsen54	99	65.858	Dipodomys_ordii
ENSSHAG00000018127	TSEN54	96	35.348	ENSEBUG00000005203	TSEN54	95	35.348	Eptatretus_burgeri
ENSSHAG00000018127	TSEN54	98	68.598	ENSEASG00005000579	TSEN54	99	68.598	Equus_asinus_asinus
ENSSHAG00000018127	TSEN54	98	68.598	ENSECAG00000004924	TSEN54	99	68.598	Equus_caballus
ENSSHAG00000018127	TSEN54	85	65.161	ENSEEUG00000008467	TSEN54	100	65.161	Erinaceus_europaeus
ENSSHAG00000018127	TSEN54	96	44.633	ENSELUG00000017703	tsen54	91	44.403	Esox_lucius
ENSSHAG00000018127	TSEN54	98	68.097	ENSFCAG00000023712	TSEN54	99	68.097	Felis_catus
ENSSHAG00000018127	TSEN54	93	51.089	ENSFALG00000001119	TSEN54	94	50.992	Ficedula_albicollis
ENSSHAG00000018127	TSEN54	85	64.440	ENSFDAG00000019090	TSEN54	99	64.440	Fukomys_damarensis
ENSSHAG00000018127	TSEN54	96	44.742	ENSFHEG00000005470	tsen54	96	44.742	Fundulus_heteroclitus
ENSSHAG00000018127	TSEN54	83	40.952	ENSGMOG00000013146	tsen54	99	40.952	Gadus_morhua
ENSSHAG00000018127	TSEN54	94	48.833	ENSGALG00000047163	TSEN54	98	48.833	Gallus_gallus
ENSSHAG00000018127	TSEN54	96	45.698	ENSGAFG00000005111	tsen54	96	45.507	Gambusia_affinis
ENSSHAG00000018127	TSEN54	95	42.075	ENSGACG00000014987	tsen54	99	42.075	Gasterosteus_aculeatus
ENSSHAG00000018127	TSEN54	100	55.091	ENSGAGG00000006825	TSEN54	99	55.091	Gopherus_agassizii
ENSSHAG00000018127	TSEN54	96	65.259	ENSGGOG00000009417	TSEN54	100	65.201	Gorilla_gorilla
ENSSHAG00000018127	TSEN54	87	42.708	ENSHBUG00000018296	tsen54	99	36.977	Haplochromis_burtoni
ENSSHAG00000018127	TSEN54	98	64.552	ENSHGLG00000007979	TSEN54	99	64.552	Heterocephalus_glaber_female
ENSSHAG00000018127	TSEN54	98	63.619	ENSHGLG00100005497	TSEN54	99	63.619	Heterocephalus_glaber_male
ENSSHAG00000018127	TSEN54	80	39.773	ENSHCOG00000007481	tsen54	99	40.138	Hippocampus_comes
ENSSHAG00000018127	TSEN54	98	40.187	ENSIPUG00000000590	tsen54	99	40.187	Ictalurus_punctatus
ENSSHAG00000018127	TSEN54	98	63.011	ENSSTOG00000012883	TSEN54	99	63.011	Ictidomys_tridecemlineatus
ENSSHAG00000018127	TSEN54	98	64.728	ENSJJAG00000007365	Tsen54	99	64.728	Jaculus_jaculus
ENSSHAG00000018127	TSEN54	96	44.841	ENSKMAG00000006944	tsen54	97	44.841	Kryptolebias_marmoratus
ENSSHAG00000018127	TSEN54	96	42.748	ENSLBEG00000004199	tsen54	97	42.748	Labrus_bergylta
ENSSHAG00000018127	TSEN54	96	45.057	ENSLACG00000009497	TSEN54	100	45.057	Latimeria_chalumnae
ENSSHAG00000018127	TSEN54	97	44.139	ENSLOCG00000011191	tsen54	98	44.139	Lepisosteus_oculatus
ENSSHAG00000018127	TSEN54	91	66.265	ENSLAFG00000011655	TSEN54	99	63.977	Loxodonta_africana
ENSSHAG00000018127	TSEN54	98	65.112	ENSMFAG00000000712	TSEN54	99	65.056	Macaca_fascicularis
ENSSHAG00000018127	TSEN54	98	64.925	ENSMNEG00000029199	TSEN54	99	64.870	Macaca_nemestrina
ENSSHAG00000018127	TSEN54	85	63.734	ENSMLEG00000044168	TSEN54	88	63.675	Mandrillus_leucophaeus
ENSSHAG00000018127	TSEN54	96	42.639	ENSMAMG00000019773	tsen54	97	42.586	Mastacembelus_armatus
ENSSHAG00000018127	TSEN54	96	44.340	ENSMZEG00005000884	tsen54	96	44.340	Maylandia_zebra
ENSSHAG00000018127	TSEN54	93	49.703	ENSMGAG00000009556	TSEN54	94	50.395	Meleagris_gallopavo
ENSSHAG00000018127	TSEN54	98	65.169	ENSMAUG00000016838	Tsen54	99	65.169	Mesocricetus_auratus
ENSSHAG00000018127	TSEN54	98	65.672	ENSMICG00000044012	TSEN54	99	65.672	Microcebus_murinus
ENSSHAG00000018127	TSEN54	98	64.728	ENSMOCG00000021585	Tsen54	99	64.728	Microtus_ochrogaster
ENSSHAG00000018127	TSEN54	95	32.197	ENSMMOG00000020189	tsen54	98	33.144	Mola_mola
ENSSHAG00000018127	TSEN54	97	82.642	ENSMODG00000007438	TSEN54	100	81.421	Monodelphis_domestica
ENSSHAG00000018127	TSEN54	96	44.423	ENSMALG00000020573	tsen54	97	44.423	Monopterus_albus
ENSSHAG00000018127	TSEN54	100	63.303	MGP_CAROLIEiJ_G0017417	Tsen54	100	63.303	Mus_caroli
ENSSHAG00000018127	TSEN54	98	63.806	ENSMUSG00000020781	Tsen54	99	63.806	Mus_musculus
ENSSHAG00000018127	TSEN54	98	64.991	MGP_PahariEiJ_G0018547	Tsen54	99	64.991	Mus_pahari
ENSSHAG00000018127	TSEN54	98	64.060	MGP_SPRETEiJ_G0018262	Tsen54	99	64.060	Mus_spretus
ENSSHAG00000018127	TSEN54	100	65.751	ENSMPUG00000013870	TSEN54	100	65.751	Mustela_putorius_furo
ENSSHAG00000018127	TSEN54	98	65.730	ENSMLUG00000015298	TSEN54	99	65.730	Myotis_lucifugus
ENSSHAG00000018127	TSEN54	98	64.991	ENSNGAG00000015673	Tsen54	99	64.991	Nannospalax_galili
ENSSHAG00000018127	TSEN54	88	81.628	ENSMEUG00000011908	TSEN54	100	81.628	Notamacropus_eugenii
ENSSHAG00000018127	TSEN54	98	59.665	ENSOPRG00000012513	TSEN54	99	59.665	Ochotona_princeps
ENSSHAG00000018127	TSEN54	96	43.378	ENSONIG00000009543	tsen54	96	43.378	Oreochromis_niloticus
ENSSHAG00000018127	TSEN54	98	60.110	ENSOCUG00000009875	TSEN54	99	60.110	Oryctolagus_cuniculus
ENSSHAG00000018127	TSEN54	96	44.338	ENSORLG00000000852	tsen54	97	44.338	Oryzias_latipes
ENSSHAG00000018127	TSEN54	96	44.595	ENSORLG00020018221	tsen54	97	45.106	Oryzias_latipes_hni
ENSSHAG00000018127	TSEN54	96	44.402	ENSORLG00015009413	tsen54	98	44.253	Oryzias_latipes_hsok
ENSSHAG00000018127	TSEN54	96	43.269	ENSOMEG00000014402	tsen54	94	43.269	Oryzias_melastigma
ENSSHAG00000018127	TSEN54	98	61.495	ENSOGAG00000001442	TSEN54	99	61.495	Otolemur_garnettii
ENSSHAG00000018127	TSEN54	85	64.655	ENSOARG00000010361	TSEN54	100	64.655	Ovis_aries
ENSSHAG00000018127	TSEN54	93	63.583	ENSPPAG00000043519	TSEN54	99	64.579	Pan_paniscus
ENSSHAG00000018127	TSEN54	98	68.470	ENSPPRG00000009162	TSEN54	99	68.470	Panthera_pardus
ENSSHAG00000018127	TSEN54	85	66.309	ENSPTIG00000019312	TSEN54	96	66.309	Panthera_tigris_altaica
ENSSHAG00000018127	TSEN54	98	65.672	ENSPTRG00000009646	TSEN54	99	65.613	Pan_troglodytes
ENSSHAG00000018127	TSEN54	99	64.695	ENSPANG00000020133	TSEN54	100	64.706	Papio_anubis
ENSSHAG00000018127	TSEN54	96	44.485	ENSPKIG00000023018	tsen54	100	44.419	Paramormyrops_kingsleyae
ENSSHAG00000018127	TSEN54	80	53.881	ENSPSIG00000012807	TSEN54	99	53.881	Pelodiscus_sinensis
ENSSHAG00000018127	TSEN54	92	35.984	ENSPMGG00000019578	tsen54	99	35.984	Periophthalmus_magnuspinnatus
ENSSHAG00000018127	TSEN54	98	66.168	ENSPEMG00000014857	Tsen54	99	66.168	Peromyscus_maniculatus_bairdii
ENSSHAG00000018127	TSEN54	96	46.415	ENSPFOG00000022740	tsen54	96	46.415	Poecilia_formosa
ENSSHAG00000018127	TSEN54	96	46.300	ENSPLAG00000014847	tsen54	96	46.300	Poecilia_latipinna
ENSSHAG00000018127	TSEN54	96	46.110	ENSPMEG00000022876	tsen54	96	46.110	Poecilia_mexicana
ENSSHAG00000018127	TSEN54	98	44.821	ENSPREG00000013090	tsen54	99	44.821	Poecilia_reticulata
ENSSHAG00000018127	TSEN54	90	60.692	ENSPPYG00000008629	TSEN54	100	61.179	Pongo_abelii
ENSSHAG00000018127	TSEN54	93	60.198	ENSPCAG00000002093	TSEN54	98	60.198	Procavia_capensis
ENSSHAG00000018127	TSEN54	98	66.791	ENSPCOG00000027880	TSEN54	99	66.853	Propithecus_coquereli
ENSSHAG00000018127	TSEN54	98	68.352	ENSPVAG00000008446	TSEN54	99	68.352	Pteropus_vampyrus
ENSSHAG00000018127	TSEN54	92	43.195	ENSPNYG00000010217	tsen54	99	43.164	Pundamilia_nyererei
ENSSHAG00000018127	TSEN54	96	45.094	ENSPNAG00000003770	tsen54	97	45.094	Pygocentrus_nattereri
ENSSHAG00000018127	TSEN54	98	64.728	ENSRNOG00000004598	Tsen54	99	64.728	Rattus_norvegicus
ENSSHAG00000018127	TSEN54	98	64.739	ENSRBIG00000043040	TSEN54	99	64.684	Rhinopithecus_bieti
ENSSHAG00000018127	TSEN54	98	64.552	ENSRROG00000030797	TSEN54	99	64.498	Rhinopithecus_roxellana
ENSSHAG00000018127	TSEN54	99	62.292	ENSSBOG00000013543	TSEN54	99	62.063	Saimiri_boliviensis_boliviensis
ENSSHAG00000018127	TSEN54	80	43.311	ENSSFOG00015004093	tsen54	100	43.311	Scleropages_formosus
ENSSHAG00000018127	TSEN54	97	41.132	ENSSMAG00000012449	tsen54	99	41.839	Scophthalmus_maximus
ENSSHAG00000018127	TSEN54	96	43.100	ENSSDUG00000021506	tsen54	97	43.289	Seriola_dumerili
ENSSHAG00000018127	TSEN54	96	43.478	ENSSLDG00000016303	tsen54	97	43.667	Seriola_lalandi_dorsalis
ENSSHAG00000018127	TSEN54	79	51.131	ENSSPUG00000008988	TSEN54	96	51.126	Sphenodon_punctatus
ENSSHAG00000018127	TSEN54	80	41.781	ENSSPAG00000008047	tsen54	99	41.781	Stegastes_partitus
ENSSHAG00000018127	TSEN54	92	43.888	ENSSPAG00000008098	-	99	43.888	Stegastes_partitus
ENSSHAG00000018127	TSEN54	98	68.715	ENSSSCG00000036852	TSEN54	99	68.715	Sus_scrofa
ENSSHAG00000018127	TSEN54	85	51.606	ENSTGUG00000008548	TSEN54	100	51.606	Taeniopygia_guttata
ENSSHAG00000018127	TSEN54	96	42.884	ENSTRUG00000004230	tsen54	96	43.454	Takifugu_rubripes
ENSSHAG00000018127	TSEN54	95	41.899	ENSTNIG00000011281	tsen54	97	44.788	Tetraodon_nigroviridis
ENSSHAG00000018127	TSEN54	85	66.882	ENSTTRG00000015828	TSEN54	100	66.882	Tursiops_truncatus
ENSSHAG00000018127	TSEN54	80	66.059	ENSUAMG00000010045	TSEN54	100	66.059	Ursus_americanus
ENSSHAG00000018127	TSEN54	83	66.079	ENSUMAG00000008979	TSEN54	100	66.079	Ursus_maritimus
ENSSHAG00000018127	TSEN54	96	66.219	ENSVVUG00000011411	TSEN54	98	66.157	Vulpes_vulpes
ENSSHAG00000018127	TSEN54	97	47.655	ENSXETG00000012532	tsen54	99	61.314	Xenopus_tropicalis
ENSSHAG00000018127	TSEN54	96	41.954	ENSXCOG00000018245	tsen54	99	41.954	Xiphophorus_couchianus
ENSSHAG00000018127	TSEN54	96	45.455	ENSXMAG00000018818	tsen54	96	45.455	Xiphophorus_maculatus