EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000018128 (Gene tree)
Gene ID: 100918926
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 63924 bases
Position: chrGL864888.1:3281369-3345292
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000021390	Suf	PF05843.14	2.2e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000021563	-	5050	-	ENSSHAP00000021390	717 (aa)	-	G3X135

Gene Model

Click here to download ENSSHAG00000018128's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000018128	-	100	86.192	ENSSHAG00000003135	-	99	86.192

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018128	-	100	97.908	ENSG00000176102	CSTF3	100	97.908	Homo_sapiens
ENSSHAG00000018128	-	99	92.232	ENSAPOG00000014054	cstf3	99	92.232	Acanthochromis_polyacanthus
ENSSHAG00000018128	-	99	98.174	ENSAMEG00000007187	CSTF3	99	98.174	Ailuropoda_melanoleuca
ENSSHAG00000018128	-	87	86.240	ENSACIG00000005539	cstf3	100	86.240	Amphilophus_citrinellus
ENSSHAG00000018128	-	99	91.949	ENSAOCG00000010930	cstf3	99	91.949	Amphiprion_ocellaris
ENSSHAG00000018128	-	99	91.949	ENSAPEG00000007903	cstf3	99	91.949	Amphiprion_percula
ENSSHAG00000018128	-	99	92.232	ENSATEG00000000190	cstf3	99	92.232	Anabas_testudineus
ENSSHAG00000018128	-	99	97.458	ENSAPLG00000007217	CSTF3	100	97.458	Anas_platyrhynchos
ENSSHAG00000018128	-	99	95.810	ENSACAG00000002823	CSTF3	99	95.810	Anolis_carolinensis
ENSSHAG00000018128	-	100	97.908	ENSANAG00000020699	CSTF3	100	98.560	Aotus_nancymaae
ENSSHAG00000018128	-	98	91.915	ENSACLG00000007820	cstf3	99	91.949	Astatotilapia_calliptera
ENSSHAG00000018128	-	100	89.694	ENSAMXG00000014198	cstf3	100	89.972	Astyanax_mexicanus
ENSSHAG00000018128	-	100	97.908	ENSBTAG00000008617	CSTF3	100	98.665	Bos_taurus
ENSSHAG00000018128	-	97	49.313	WBGene00006307	suf-1	99	49.313	Caenorhabditis_elegans
ENSSHAG00000018128	-	100	97.908	ENSCJAG00000005533	CSTF3	100	98.560	Callithrix_jacchus
ENSSHAG00000018128	-	100	97.908	ENSCAFG00000007264	CSTF3	100	97.908	Canis_familiaris
ENSSHAG00000018128	-	99	98.315	ENSCAFG00020002715	CSTF3	99	98.315	Canis_lupus_dingo
ENSSHAG00000018128	-	98	97.155	ENSCHIG00000016418	CSTF3	100	98.560	Capra_hircus
ENSSHAG00000018128	-	99	98.166	ENSTSYG00000000451	CSTF3	99	99.778	Carlito_syrichta
ENSSHAG00000018128	-	83	91.943	ENSCAPG00000010958	CSTF3	98	91.943	Cavia_aperea
ENSSHAG00000018128	-	100	97.629	ENSCPOG00000005545	CSTF3	100	97.896	Cavia_porcellus
ENSSHAG00000018128	-	100	97.908	ENSCCAG00000024790	CSTF3	100	98.560	Cebus_capucinus
ENSSHAG00000018128	-	100	97.908	ENSCATG00000007080	CSTF3	100	98.560	Cercocebus_atys
ENSSHAG00000018128	-	100	97.908	ENSCLAG00000016179	CSTF3	100	97.908	Chinchilla_lanigera
ENSSHAG00000018128	-	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSSHAG00000018128	-	100	96.379	ENSCPBG00000006753	CSTF3	100	96.379	Chrysemys_picta_bellii
ENSSHAG00000018128	-	99	62.657	ENSCING00000006401	-	98	62.657	Ciona_intestinalis
ENSSHAG00000018128	-	98	61.925	ENSCSAVG00000004851	-	100	61.925	Ciona_savignyi
ENSSHAG00000018128	-	100	97.908	ENSCANG00000035468	CSTF3	100	98.560	Colobus_angolensis_palliatus
ENSSHAG00000018128	-	100	97.629	ENSCGRG00001014773	Cstf3	100	97.629	Cricetulus_griseus_chok1gshd
ENSSHAG00000018128	-	100	97.629	ENSCGRG00000004142	Cstf3	100	97.629	Cricetulus_griseus_crigri
ENSSHAG00000018128	-	100	90.934	ENSCSEG00000014283	cstf3	100	90.934	Cynoglossus_semilaevis
ENSSHAG00000018128	-	99	90.490	ENSCVAG00000019739	cstf3	99	90.490	Cyprinodon_variegatus
ENSSHAG00000018128	-	99	91.396	ENSDARG00000018904	cstf3	99	91.396	Danio_rerio
ENSSHAG00000018128	-	99	97.756	ENSDNOG00000007366	CSTF3	99	97.756	Dasypus_novemcinctus
ENSSHAG00000018128	-	99	90.336	ENSDORG00000005898	Cstf3	99	90.336	Dipodomys_ordii
ENSSHAG00000018128	-	98	57.815	FBgn0003559	su(f)	98	57.815	Drosophila_melanogaster
ENSSHAG00000018128	-	90	92.835	ENSETEG00000017097	CSTF3	90	92.835	Echinops_telfairi
ENSSHAG00000018128	-	84	73.719	ENSEBUG00000015459	cstf3	96	73.884	Eptatretus_burgeri
ENSSHAG00000018128	-	98	98.571	ENSEASG00005019884	CSTF3	100	98.571	Equus_asinus_asinus
ENSSHAG00000018128	-	98	98.571	ENSECAG00000023338	CSTF3	100	98.571	Equus_caballus
ENSSHAG00000018128	-	100	92.469	ENSEEUG00000015167	CSTF3	100	92.469	Erinaceus_europaeus
ENSSHAG00000018128	-	100	89.400	ENSELUG00000023393	cstf3	100	89.400	Esox_lucius
ENSSHAG00000018128	-	100	97.768	ENSFCAG00000030711	CSTF3	100	97.768	Felis_catus
ENSSHAG00000018128	-	93	97.901	ENSFALG00000010764	CSTF3	100	96.006	Ficedula_albicollis
ENSSHAG00000018128	-	100	97.768	ENSFDAG00000012082	CSTF3	100	97.768	Fukomys_damarensis
ENSSHAG00000018128	-	99	90.629	ENSFHEG00000020623	cstf3	99	90.629	Fundulus_heteroclitus
ENSSHAG00000018128	-	99	89.986	ENSGMOG00000012275	cstf3	99	89.986	Gadus_morhua
ENSSHAG00000018128	-	99	96.788	ENSGALG00000011685	CSTF3	99	96.788	Gallus_gallus
ENSSHAG00000018128	-	99	90.909	ENSGAFG00000002181	cstf3	99	90.909	Gambusia_affinis
ENSSHAG00000018128	-	99	91.525	ENSGACG00000015997	cstf3	99	91.525	Gasterosteus_aculeatus
ENSSHAG00000018128	-	99	96.508	ENSGAGG00000006200	CSTF3	99	96.508	Gopherus_agassizii
ENSSHAG00000018128	-	99	92.666	ENSGGOG00000026591	CSTF3	99	92.666	Gorilla_gorilla
ENSSHAG00000018128	-	98	91.915	ENSHBUG00000016656	cstf3	99	91.949	Haplochromis_burtoni
ENSSHAG00000018128	-	100	97.768	ENSHGLG00000017834	CSTF3	100	97.768	Heterocephalus_glaber_female
ENSSHAG00000018128	-	100	97.768	ENSHGLG00100018042	CSTF3	100	97.768	Heterocephalus_glaber_male
ENSSHAG00000018128	-	98	88.810	ENSHCOG00000015218	cstf3	99	88.842	Hippocampus_comes
ENSSHAG00000018128	-	99	90.537	ENSIPUG00000013170	CSTF3	99	90.537	Ictalurus_punctatus
ENSSHAG00000018128	-	100	97.908	ENSSTOG00000013306	CSTF3	100	97.908	Ictidomys_tridecemlineatus
ENSSHAG00000018128	-	99	86.536	ENSJJAG00000018430	Cstf3	99	86.536	Jaculus_jaculus
ENSSHAG00000018128	-	99	90.350	ENSKMAG00000010916	cstf3	99	90.350	Kryptolebias_marmoratus
ENSSHAG00000018128	-	99	91.243	ENSLBEG00000002306	cstf3	99	91.243	Labrus_bergylta
ENSSHAG00000018128	-	100	92.748	ENSLACG00000017296	CSTF3	100	92.748	Latimeria_chalumnae
ENSSHAG00000018128	-	100	92.190	ENSLOCG00000004415	cstf3	100	92.190	Lepisosteus_oculatus
ENSSHAG00000018128	-	100	97.490	ENSLAFG00000008712	CSTF3	100	97.490	Loxodonta_africana
ENSSHAG00000018128	-	100	97.908	ENSMFAG00000029516	CSTF3	100	98.560	Macaca_fascicularis
ENSSHAG00000018128	-	100	97.908	ENSMMUG00000002542	CSTF3	100	97.908	Macaca_mulatta
ENSSHAG00000018128	-	100	97.908	ENSMNEG00000021807	CSTF3	100	98.560	Macaca_nemestrina
ENSSHAG00000018128	-	100	97.908	ENSMLEG00000039594	CSTF3	100	98.560	Mandrillus_leucophaeus
ENSSHAG00000018128	-	99	91.808	ENSMAMG00000020423	cstf3	99	91.808	Mastacembelus_armatus
ENSSHAG00000018128	-	98	91.915	ENSMZEG00005012082	cstf3	99	91.949	Maylandia_zebra
ENSSHAG00000018128	-	99	96.788	ENSMGAG00000001383	CSTF3	100	96.648	Meleagris_gallopavo
ENSSHAG00000018128	-	100	97.490	ENSMAUG00000002487	Cstf3	100	97.490	Mesocricetus_auratus
ENSSHAG00000018128	-	100	97.629	ENSMICG00000004784	CSTF3	100	98.240	Microcebus_murinus
ENSSHAG00000018128	-	100	97.629	ENSMOCG00000017583	Cstf3	100	97.629	Microtus_ochrogaster
ENSSHAG00000018128	-	99	91.667	ENSMMOG00000016026	cstf3	94	91.667	Mola_mola
ENSSHAG00000018128	-	100	98.745	ENSMODG00000009745	-	100	98.745	Monodelphis_domestica
ENSSHAG00000018128	-	99	84.432	ENSMODG00000025205	-	99	84.432	Monodelphis_domestica
ENSSHAG00000018128	-	99	91.667	ENSMALG00000012050	cstf3	99	91.667	Monopterus_albus
ENSSHAG00000018128	-	100	97.629	MGP_CAROLIEiJ_G0024026	Cstf3	100	97.629	Mus_caroli
ENSSHAG00000018128	-	100	97.629	ENSMUSG00000027176	Cstf3	100	97.629	Mus_musculus
ENSSHAG00000018128	-	100	97.629	MGP_PahariEiJ_G0025464	Cstf3	100	97.629	Mus_pahari
ENSSHAG00000018128	-	100	97.629	MGP_SPRETEiJ_G0024939	Cstf3	100	97.629	Mus_spretus
ENSSHAG00000018128	-	100	97.768	ENSMPUG00000011457	CSTF3	100	97.768	Mustela_putorius_furo
ENSSHAG00000018128	-	99	98.169	ENSMLUG00000003073	-	99	98.169	Myotis_lucifugus
ENSSHAG00000018128	-	100	94.421	ENSMLUG00000026022	-	100	94.421	Myotis_lucifugus
ENSSHAG00000018128	-	100	97.350	ENSNGAG00000010677	Cstf3	100	97.350	Nannospalax_galili
ENSSHAG00000018128	-	87	91.200	ENSNBRG00000007345	cstf3	100	91.200	Neolamprologus_brichardi
ENSSHAG00000018128	-	100	97.908	ENSNLEG00000017901	CSTF3	100	98.560	Nomascus_leucogenys
ENSSHAG00000018128	-	73	95.220	ENSMEUG00000005640	-	100	95.220	Notamacropus_eugenii
ENSSHAG00000018128	-	67	90.667	ENSOPRG00000000199	-	67	90.667	Ochotona_princeps
ENSSHAG00000018128	-	100	97.629	ENSODEG00000016737	-	100	97.629	Octodon_degus
ENSSHAG00000018128	-	89	85.849	ENSODEG00000006311	-	97	85.849	Octodon_degus
ENSSHAG00000018128	-	98	91.915	ENSONIG00000005563	cstf3	99	91.949	Oreochromis_niloticus
ENSSHAG00000018128	-	90	97.231	ENSOANG00000015140	CSTF3	100	97.231	Ornithorhynchus_anatinus
ENSSHAG00000018128	-	100	97.490	ENSOCUG00000015417	CSTF3	100	97.490	Oryctolagus_cuniculus
ENSSHAG00000018128	-	99	91.408	ENSORLG00000009762	cstf3	99	91.408	Oryzias_latipes
ENSSHAG00000018128	-	99	91.408	ENSORLG00020005540	cstf3	99	91.408	Oryzias_latipes_hni
ENSSHAG00000018128	-	99	91.268	ENSORLG00015003551	cstf3	99	91.268	Oryzias_latipes_hsok
ENSSHAG00000018128	-	99	90.704	ENSOMEG00000003848	cstf3	99	90.704	Oryzias_melastigma
ENSSHAG00000018128	-	100	97.361	ENSOGAG00000010229	CSTF3	100	97.361	Otolemur_garnettii
ENSSHAG00000018128	-	90	98.445	ENSOARG00000017271	CSTF3	99	98.445	Ovis_aries
ENSSHAG00000018128	-	99	94.922	ENSPPAG00000027358	CSTF3	99	94.922	Pan_paniscus
ENSSHAG00000018128	-	100	97.768	ENSPPRG00000016852	CSTF3	100	97.768	Panthera_pardus
ENSSHAG00000018128	-	100	97.768	ENSPTIG00000008716	CSTF3	100	97.768	Panthera_tigris_altaica
ENSSHAG00000018128	-	100	97.908	ENSPTRG00000003485	CSTF3	100	97.908	Pan_troglodytes
ENSSHAG00000018128	-	100	97.908	ENSPANG00000013722	CSTF3	100	97.908	Papio_anubis
ENSSHAG00000018128	-	100	91.213	ENSPKIG00000023648	cstf3	100	91.213	Paramormyrops_kingsleyae
ENSSHAG00000018128	-	100	95.961	ENSPSIG00000009173	CSTF3	100	95.961	Pelodiscus_sinensis
ENSSHAG00000018128	-	76	94.333	ENSPMGG00000000164	cstf3	99	94.333	Periophthalmus_magnuspinnatus
ENSSHAG00000018128	-	100	97.490	ENSPEMG00000011481	Cstf3	100	97.490	Peromyscus_maniculatus_bairdii
ENSSHAG00000018128	-	99	80.197	ENSPMAG00000007282	cstf3	99	79.747	Petromyzon_marinus
ENSSHAG00000018128	-	100	95.543	ENSPCIG00000026406	-	100	99.040	Phascolarctos_cinereus
ENSSHAG00000018128	-	100	81.198	ENSPCIG00000030419	-	90	81.894	Phascolarctos_cinereus
ENSSHAG00000018128	-	99	91.525	ENSPFOG00000017239	cstf3	99	91.525	Poecilia_formosa
ENSSHAG00000018128	-	99	91.525	ENSPLAG00000009456	cstf3	99	91.525	Poecilia_latipinna
ENSSHAG00000018128	-	99	91.525	ENSPMEG00000010320	cstf3	99	91.525	Poecilia_mexicana
ENSSHAG00000018128	-	99	91.525	ENSPREG00000013549	cstf3	99	91.525	Poecilia_reticulata
ENSSHAG00000018128	-	100	97.908	ENSPPYG00000003375	CSTF3	100	97.908	Pongo_abelii
ENSSHAG00000018128	-	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSSHAG00000018128	-	100	92.469	ENSPCOG00000014417	CSTF3	100	92.469	Propithecus_coquereli
ENSSHAG00000018128	-	100	92.469	ENSPVAG00000002350	CSTF3	100	92.469	Pteropus_vampyrus
ENSSHAG00000018128	-	98	91.915	ENSPNYG00000018259	cstf3	99	91.949	Pundamilia_nyererei
ENSSHAG00000018128	-	100	91.353	ENSPNAG00000020182	cstf3	100	91.353	Pygocentrus_nattereri
ENSSHAG00000018128	-	87	98.080	ENSRNOG00000012089	Cstf3	100	98.080	Rattus_norvegicus
ENSSHAG00000018128	-	99	97.179	ENSRBIG00000044258	CSTF3	100	98.560	Rhinopithecus_bieti
ENSSHAG00000018128	-	100	97.908	ENSRROG00000043450	CSTF3	100	98.560	Rhinopithecus_roxellana
ENSSHAG00000018128	-	100	97.908	ENSSBOG00000024764	CSTF3	100	98.560	Saimiri_boliviensis_boliviensis
ENSSHAG00000018128	-	100	91.492	ENSSFOG00015022133	cstf3	100	91.492	Scleropages_formosus
ENSSHAG00000018128	-	99	91.243	ENSSMAG00000002197	cstf3	99	91.243	Scophthalmus_maximus
ENSSHAG00000018128	-	99	92.090	ENSSDUG00000020426	cstf3	99	92.090	Seriola_dumerili
ENSSHAG00000018128	-	99	92.090	ENSSLDG00000025649	cstf3	99	92.090	Seriola_lalandi_dorsalis
ENSSHAG00000018128	-	100	97.490	ENSSARG00000000391	CSTF3	100	97.490	Sorex_araneus
ENSSHAG00000018128	-	96	97.106	ENSSPUG00000010546	CSTF3	100	97.106	Sphenodon_punctatus
ENSSHAG00000018128	-	99	92.090	ENSSPAG00000004958	cstf3	99	92.090	Stegastes_partitus
ENSSHAG00000018128	-	99	97.765	ENSSSCG00000040954	CSTF3	100	97.765	Sus_scrofa
ENSSHAG00000018128	-	99	96.893	ENSTGUG00000005010	CSTF3	100	96.893	Taeniopygia_guttata
ENSSHAG00000018128	-	99	90.819	ENSTRUG00000004959	cstf3	99	90.819	Takifugu_rubripes
ENSSHAG00000018128	-	99	91.243	ENSTNIG00000013811	cstf3	98	91.243	Tetraodon_nigroviridis
ENSSHAG00000018128	-	90	95.327	ENSTBEG00000001544	CSTF3	90	95.327	Tupaia_belangeri
ENSSHAG00000018128	-	100	94.840	ENSTTRG00000016366	CSTF3	100	94.840	Tursiops_truncatus
ENSSHAG00000018128	-	99	98.034	ENSUMAG00000018971	CSTF3	100	98.240	Ursus_maritimus
ENSSHAG00000018128	-	100	97.768	ENSVPAG00000007800	CSTF3	100	97.768	Vicugna_pacos
ENSSHAG00000018128	-	99	98.315	ENSVVUG00000014938	CSTF3	100	98.560	Vulpes_vulpes
ENSSHAG00000018128	-	88	78.281	ENSXETG00000021399	cstf3	100	79.450	Xenopus_tropicalis
ENSSHAG00000018128	-	66	43.685	ENSXETG00000017946	-	99	43.685	Xenopus_tropicalis
ENSSHAG00000018128	-	87	90.720	ENSXCOG00000011741	cstf3	100	90.720	Xiphophorus_couchianus
ENSSHAG00000018128	-	99	91.049	ENSXMAG00000009545	cstf3	99	91.049	Xiphophorus_maculatus