EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000018214 (Gene tree)
Gene ID: 100932704
Gene Symbol: KPNB1
Alias: IMB1|IPO1|IPOB|Impnb|MGC2155|MGC2156|MGC2157|NTF97
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 21929 bases
Position: chrGL856827.1:3354376-3376304
Accession: 6400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000021501	IBN_N	PF03810.19	3.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000021674	KPNB1-201	2606	-	ENSSHAP00000021501	847 (aa)	-	G3X1E6

Gene Model

Click here to download ENSSHAG00000018214's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018214	KPNB1	100	98.111	ENSG00000108424	KPNB1	100	100.000	Homo_sapiens
ENSSHAG00000018214	KPNB1	100	93.506	ENSAPOG00000020572	kpnb1	96	93.506	Acanthochromis_polyacanthus
ENSSHAG00000018214	KPNB1	99	98.817	ENSAMEG00000004613	KPNB1	100	98.817	Ailuropoda_melanoleuca
ENSSHAG00000018214	KPNB1	100	93.388	ENSACIG00000023130	kpnb1	99	93.388	Amphilophus_citrinellus
ENSSHAG00000018214	KPNB1	100	93.506	ENSAOCG00000007048	kpnb1	96	93.506	Amphiprion_ocellaris
ENSSHAG00000018214	KPNB1	100	93.506	ENSAPEG00000008270	kpnb1	96	93.506	Amphiprion_percula
ENSSHAG00000018214	KPNB1	100	92.798	ENSATEG00000015139	kpnb1	96	92.798	Anabas_testudineus
ENSSHAG00000018214	KPNB1	99	97.642	ENSAPLG00000010177	KPNB1	97	97.642	Anas_platyrhynchos
ENSSHAG00000018214	KPNB1	100	97.757	ENSACAG00000007097	KPNB1	96	97.757	Anolis_carolinensis
ENSSHAG00000018214	KPNB1	100	95.277	ENSANAG00000024932	-	96	95.277	Aotus_nancymaae
ENSSHAG00000018214	KPNB1	100	93.152	ENSACLG00000015070	kpnb1	96	93.152	Astatotilapia_calliptera
ENSSHAG00000018214	KPNB1	100	93.506	ENSAMXG00000041903	kpnb1	96	93.506	Astyanax_mexicanus
ENSSHAG00000018214	KPNB1	100	98.465	ENSBTAG00000006586	KPNB1	96	98.465	Bos_taurus
ENSSHAG00000018214	KPNB1	99	49.178	WBGene00002075	imb-1	95	49.063	Caenorhabditis_elegans
ENSSHAG00000018214	KPNB1	100	97.993	ENSCJAG00000007834	KPNB1	96	97.993	Callithrix_jacchus
ENSSHAG00000018214	KPNB1	100	98.465	ENSCAFG00000016678	KPNB1	96	98.465	Canis_familiaris
ENSSHAG00000018214	KPNB1	100	98.465	ENSCAFG00020023205	KPNB1	96	98.465	Canis_lupus_dingo
ENSSHAG00000018214	KPNB1	100	98.465	ENSCHIG00000014896	KPNB1	96	98.465	Capra_hircus
ENSSHAG00000018214	KPNB1	99	98.462	ENSTSYG00000014472	KPNB1	97	98.462	Carlito_syrichta
ENSSHAG00000018214	KPNB1	99	98.343	ENSCAPG00000014185	KPNB1	100	98.343	Cavia_aperea
ENSSHAG00000018214	KPNB1	100	98.229	ENSCPOG00000006566	KPNB1	96	98.229	Cavia_porcellus
ENSSHAG00000018214	KPNB1	100	90.813	ENSCCAG00000029263	-	96	90.813	Cebus_capucinus
ENSSHAG00000018214	KPNB1	99	76.792	ENSCCAG00000018551	-	96	76.792	Cebus_capucinus
ENSSHAG00000018214	KPNB1	100	98.111	ENSCATG00000037124	KPNB1	96	98.111	Cercocebus_atys
ENSSHAG00000018214	KPNB1	100	98.111	ENSCLAG00000017091	KPNB1	96	98.111	Chinchilla_lanigera
ENSSHAG00000018214	KPNB1	100	98.111	ENSCSAG00000002605	KPNB1	96	98.111	Chlorocebus_sabaeus
ENSSHAG00000018214	KPNB1	72	96.226	ENSCHOG00000010604	KPNB1	69	96.226	Choloepus_hoffmanni
ENSSHAG00000018214	KPNB1	100	98.701	ENSCPBG00000027423	KPNB1	92	98.701	Chrysemys_picta_bellii
ENSSHAG00000018214	KPNB1	99	65.248	ENSCING00000004639	-	95	65.248	Ciona_intestinalis
ENSSHAG00000018214	KPNB1	100	62.807	ENSCSAVG00000008624	-	96	62.807	Ciona_savignyi
ENSSHAG00000018214	KPNB1	99	96.802	ENSCANG00000013489	KPNB1	100	96.802	Colobus_angolensis_palliatus
ENSSHAG00000018214	KPNB1	100	98.111	ENSCGRG00001016042	Kpnb1	96	98.111	Cricetulus_griseus_chok1gshd
ENSSHAG00000018214	KPNB1	99	98.225	ENSCGRG00000013910	Kpnb1	100	98.225	Cricetulus_griseus_crigri
ENSSHAG00000018214	KPNB1	100	90.437	ENSCSEG00000007991	kpnb1	99	90.789	Cynoglossus_semilaevis
ENSSHAG00000018214	KPNB1	100	92.562	ENSDARG00000104889	kpnb1	96	92.562	Danio_rerio
ENSSHAG00000018214	KPNB1	99	61.747	FBgn0262743	Fs(2)Ket	95	61.747	Drosophila_melanogaster
ENSSHAG00000018214	KPNB1	99	82.033	ENSEBUG00000013869	kpnb1	96	82.033	Eptatretus_burgeri
ENSSHAG00000018214	KPNB1	100	98.465	ENSEASG00005000805	KPNB1	96	98.465	Equus_asinus_asinus
ENSSHAG00000018214	KPNB1	100	98.465	ENSECAG00000014560	KPNB1	96	98.465	Equus_caballus
ENSSHAG00000018214	KPNB1	88	98.995	ENSEEUG00000005046	KPNB1	88	98.995	Erinaceus_europaeus
ENSSHAG00000018214	KPNB1	100	93.388	ENSELUG00000015847	kpnb1	96	93.388	Esox_lucius
ENSSHAG00000018214	KPNB1	100	98.465	ENSFCAG00000023994	KPNB1	96	98.465	Felis_catus
ENSSHAG00000018214	KPNB1	99	98.343	ENSFDAG00000019923	KPNB1	100	98.343	Fukomys_damarensis
ENSSHAG00000018214	KPNB1	100	92.798	ENSFHEG00000020199	kpnb1	96	92.798	Fundulus_heteroclitus
ENSSHAG00000018214	KPNB1	99	88.639	ENSGMOG00000011607	kpnb1	96	88.639	Gadus_morhua
ENSSHAG00000018214	KPNB1	100	97.993	ENSGALG00000036962	KPNB1	96	97.993	Gallus_gallus
ENSSHAG00000018214	KPNB1	100	92.562	ENSGAFG00000000783	kpnb1	96	92.562	Gambusia_affinis
ENSSHAG00000018214	KPNB1	100	88.785	ENSGACG00000014765	kpnb1	96	88.785	Gasterosteus_aculeatus
ENSSHAG00000018214	KPNB1	99	98.221	ENSGAGG00000023737	KPNB1	92	98.221	Gopherus_agassizii
ENSSHAG00000018214	KPNB1	100	98.111	ENSGGOG00000008089	KPNB1	96	98.111	Gorilla_gorilla
ENSSHAG00000018214	KPNB1	100	93.152	ENSHBUG00000016826	kpnb1	96	93.152	Haplochromis_burtoni
ENSSHAG00000018214	KPNB1	100	98.229	ENSHGLG00000014138	KPNB1	96	98.229	Heterocephalus_glaber_female
ENSSHAG00000018214	KPNB1	99	98.343	ENSHGLG00100006572	KPNB1	100	98.343	Heterocephalus_glaber_male
ENSSHAG00000018214	KPNB1	100	91.499	ENSHCOG00000002084	kpnb1	96	91.499	Hippocampus_comes
ENSSHAG00000018214	KPNB1	100	89.020	ENSIPUG00000012402	kpnb1	93	89.020	Ictalurus_punctatus
ENSSHAG00000018214	KPNB1	100	98.465	ENSSTOG00000007896	KPNB1	96	98.465	Ictidomys_tridecemlineatus
ENSSHAG00000018214	KPNB1	100	98.111	ENSJJAG00000010909	Kpnb1	96	98.111	Jaculus_jaculus
ENSSHAG00000018214	KPNB1	100	92.444	ENSKMAG00000001547	kpnb1	96	92.444	Kryptolebias_marmoratus
ENSSHAG00000018214	KPNB1	99	92.959	ENSLBEG00000025794	kpnb1	98	92.299	Labrus_bergylta
ENSSHAG00000018214	KPNB1	89	94.960	ENSLACG00000017620	KPNB1	97	94.960	Latimeria_chalumnae
ENSSHAG00000018214	KPNB1	100	93.979	ENSLOCG00000013753	kpnb1	96	93.979	Lepisosteus_oculatus
ENSSHAG00000018214	KPNB1	100	93.034	ENSLAFG00000001328	KPNB1	96	93.034	Loxodonta_africana
ENSSHAG00000018214	KPNB1	99	98.225	ENSMFAG00000030197	KPNB1	100	98.225	Macaca_fascicularis
ENSSHAG00000018214	KPNB1	99	98.225	ENSMMUG00000019760	KPNB1	97	98.225	Macaca_mulatta
ENSSHAG00000018214	KPNB1	100	98.111	ENSMNEG00000040927	KPNB1	96	98.111	Macaca_nemestrina
ENSSHAG00000018214	KPNB1	99	98.225	ENSMLEG00000038185	KPNB1	96	98.225	Mandrillus_leucophaeus
ENSSHAG00000018214	KPNB1	100	93.506	ENSMAMG00000011036	kpnb1	96	93.506	Mastacembelus_armatus
ENSSHAG00000018214	KPNB1	100	93.152	ENSMZEG00005004564	kpnb1	96	93.152	Maylandia_zebra
ENSSHAG00000018214	KPNB1	57	97.930	ENSMGAG00000002770	-	100	97.930	Meleagris_gallopavo
ENSSHAG00000018214	KPNB1	100	98.111	ENSMAUG00000006211	Kpnb1	96	98.111	Mesocricetus_auratus
ENSSHAG00000018214	KPNB1	100	98.465	ENSMICG00000012059	KPNB1	81	98.465	Microcebus_murinus
ENSSHAG00000018214	KPNB1	100	98.111	ENSMOCG00000003683	Kpnb1	96	98.111	Microtus_ochrogaster
ENSSHAG00000018214	KPNB1	100	99.292	ENSMODG00000012505	KPNB1	96	99.292	Monodelphis_domestica
ENSSHAG00000018214	KPNB1	100	93.625	ENSMALG00000000863	kpnb1	96	93.625	Monopterus_albus
ENSSHAG00000018214	KPNB1	94	98.108	MGP_CAROLIEiJ_G0017050	Kpnb1	96	98.108	Mus_caroli
ENSSHAG00000018214	KPNB1	100	97.993	ENSMUSG00000001440	Kpnb1	96	97.993	Mus_musculus
ENSSHAG00000018214	KPNB1	100	97.875	ENSMPUG00000015220	KPNB1	96	97.875	Mustela_putorius_furo
ENSSHAG00000018214	KPNB1	100	93.168	ENSMLUG00000014522	KPNB1	96	93.168	Myotis_lucifugus
ENSSHAG00000018214	KPNB1	99	98.463	ENSNGAG00000017610	Kpnb1	100	98.462	Nannospalax_galili
ENSSHAG00000018214	KPNB1	100	93.152	ENSNBRG00000019305	kpnb1	96	93.152	Neolamprologus_brichardi
ENSSHAG00000018214	KPNB1	100	98.111	ENSNLEG00000001446	KPNB1	96	98.111	Nomascus_leucogenys
ENSSHAG00000018214	KPNB1	100	93.625	ENSMEUG00000014284	KPNB1	96	93.625	Notamacropus_eugenii
ENSSHAG00000018214	KPNB1	100	97.875	ENSODEG00000017287	KPNB1	96	97.875	Octodon_degus
ENSSHAG00000018214	KPNB1	100	93.270	ENSONIG00000009269	kpnb1	96	93.270	Oreochromis_niloticus
ENSSHAG00000018214	KPNB1	100	98.229	ENSOCUG00000015425	KPNB1	96	98.229	Oryctolagus_cuniculus
ENSSHAG00000018214	KPNB1	100	93.034	ENSORLG00000019936	kpnb1	96	93.034	Oryzias_latipes
ENSSHAG00000018214	KPNB1	100	93.034	ENSORLG00020021181	kpnb1	96	93.034	Oryzias_latipes_hni
ENSSHAG00000018214	KPNB1	100	92.916	ENSORLG00015012177	kpnb1	96	92.916	Oryzias_latipes_hsok
ENSSHAG00000018214	KPNB1	100	93.152	ENSOMEG00000021022	kpnb1	96	93.152	Oryzias_melastigma
ENSSHAG00000018214	KPNB1	100	98.347	ENSOGAG00000006153	KPNB1	96	98.347	Otolemur_garnettii
ENSSHAG00000018214	KPNB1	99	98.817	ENSOARG00000008469	KPNB1	97	98.817	Ovis_aries
ENSSHAG00000018214	KPNB1	100	98.111	ENSPPAG00000028842	KPNB1	96	98.111	Pan_paniscus
ENSSHAG00000018214	KPNB1	100	98.347	ENSPPRG00000022879	KPNB1	97	98.347	Panthera_pardus
ENSSHAG00000018214	KPNB1	100	98.347	ENSPTIG00000006870	KPNB1	97	98.347	Panthera_tigris_altaica
ENSSHAG00000018214	KPNB1	100	98.111	ENSPTRG00000009333	KPNB1	96	98.111	Pan_troglodytes
ENSSHAG00000018214	KPNB1	100	98.111	ENSPANG00000022099	KPNB1	96	98.111	Papio_anubis
ENSSHAG00000018214	KPNB1	100	93.506	ENSPKIG00000017563	kpnb1	96	93.506	Paramormyrops_kingsleyae
ENSSHAG00000018214	KPNB1	99	98.698	ENSPSIG00000009775	KPNB1	100	98.698	Pelodiscus_sinensis
ENSSHAG00000018214	KPNB1	100	88.430	ENSPMGG00000001041	kpnb1	89	88.430	Periophthalmus_magnuspinnatus
ENSSHAG00000018214	KPNB1	100	98.111	ENSPEMG00000017783	Kpnb1	96	98.111	Peromyscus_maniculatus_bairdii
ENSSHAG00000018214	KPNB1	99	86.808	ENSPMAG00000007117	kpnb1	96	86.808	Petromyzon_marinus
ENSSHAG00000018214	KPNB1	100	99.410	ENSPCIG00000001034	KPNB1	96	99.410	Phascolarctos_cinereus
ENSSHAG00000018214	KPNB1	100	92.562	ENSPFOG00000009014	kpnb1	96	92.562	Poecilia_formosa
ENSSHAG00000018214	KPNB1	100	92.562	ENSPLAG00000010922	kpnb1	96	92.562	Poecilia_latipinna
ENSSHAG00000018214	KPNB1	100	92.562	ENSPREG00000012268	kpnb1	96	92.562	Poecilia_reticulata
ENSSHAG00000018214	KPNB1	100	98.111	ENSPPYG00000025935	KPNB1	96	98.111	Pongo_abelii
ENSSHAG00000018214	KPNB1	78	82.667	ENSPCAG00000002526	KPNB1	78	82.667	Procavia_capensis
ENSSHAG00000018214	KPNB1	100	98.465	ENSPCOG00000026259	KPNB1	96	98.465	Propithecus_coquereli
ENSSHAG00000018214	KPNB1	100	97.993	ENSPVAG00000004910	KPNB1	96	97.993	Pteropus_vampyrus
ENSSHAG00000018214	KPNB1	100	88.839	ENSPNYG00000017703	kpnb1	93	94.032	Pundamilia_nyererei
ENSSHAG00000018214	KPNB1	100	85.064	ENSPNAG00000024047	kpnb1	96	85.064	Pygocentrus_nattereri
ENSSHAG00000018214	KPNB1	100	97.993	ENSRNOG00000009275	Kpnb1	96	97.993	Rattus_norvegicus
ENSSHAG00000018214	KPNB1	100	97.993	ENSRBIG00000002254	KPNB1	96	97.993	Rhinopithecus_bieti
ENSSHAG00000018214	KPNB1	100	98.111	ENSRROG00000030419	KPNB1	97	98.111	Rhinopithecus_roxellana
ENSSHAG00000018214	KPNB1	98	34.364	YLR347C	KAP95	94	34.364	Saccharomyces_cerevisiae
ENSSHAG00000018214	KPNB1	100	98.111	ENSSBOG00000030025	KPNB1	91	98.111	Saimiri_boliviensis_boliviensis
ENSSHAG00000018214	KPNB1	100	94.333	ENSSFOG00015020000	kpnb1	98	93.034	Scleropages_formosus
ENSSHAG00000018214	KPNB1	100	93.743	ENSSDUG00000016218	kpnb1	96	93.743	Seriola_dumerili
ENSSHAG00000018214	KPNB1	100	93.743	ENSSLDG00000021549	kpnb1	96	93.743	Seriola_lalandi_dorsalis
ENSSHAG00000018214	KPNB1	100	97.993	ENSSPUG00000017799	KPNB1	96	97.993	Sphenodon_punctatus
ENSSHAG00000018214	KPNB1	100	93.506	ENSSPAG00000019346	kpnb1	96	93.506	Stegastes_partitus
ENSSHAG00000018214	KPNB1	100	98.229	ENSSSCG00000017514	KPNB1	96	98.229	Sus_scrofa
ENSSHAG00000018214	KPNB1	99	92.781	ENSTGUG00000003387	KPNB1	100	92.781	Taeniopygia_guttata
ENSSHAG00000018214	KPNB1	100	90.791	ENSTRUG00000000542	kpnb1	96	90.791	Takifugu_rubripes
ENSSHAG00000018214	KPNB1	100	90.909	ENSTNIG00000006494	kpnb1	96	90.909	Tetraodon_nigroviridis
ENSSHAG00000018214	KPNB1	99	98.462	ENSTTRG00000004682	KPNB1	100	98.462	Tursiops_truncatus
ENSSHAG00000018214	KPNB1	100	98.465	ENSUAMG00000025344	KPNB1	96	98.465	Ursus_americanus
ENSSHAG00000018214	KPNB1	99	98.580	ENSUMAG00000016471	KPNB1	96	98.580	Ursus_maritimus
ENSSHAG00000018214	KPNB1	100	83.825	ENSVPAG00000003675	KPNB1	96	83.825	Vicugna_pacos
ENSSHAG00000018214	KPNB1	100	98.465	ENSVVUG00000003085	KPNB1	96	98.465	Vulpes_vulpes
ENSSHAG00000018214	KPNB1	100	95.514	ENSXETG00000014717	kpnb1	96	95.514	Xenopus_tropicalis
ENSSHAG00000018214	KPNB1	100	92.680	ENSXMAG00000018792	kpnb1	96	92.680	Xiphophorus_maculatus