EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000018330 (Gene tree)
Gene ID: 100919165
Gene Symbol: -
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 73772 bases
Position: chrGL856850.1:3478985-3552756
Accession: 100919165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000021645	Ago_hook	PF10427.9	2.4e-20	1	1
ENSSHAP00000021645	RRM_1	PF00076.22	8.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000021819	-	2855	-	ENSSHAP00000021645	922 (aa)	XP_003768721	G3X1U0

Gene Model

Click here to download ENSSHAG00000018330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018330	-	100	89.730	ENSG00000078687	TNRC6C	100	80.172	Homo_sapiens
ENSSHAG00000018330	-	100	63.057	ENSAPOG00000019749	tnrc6c1	51	63.915	Acanthochromis_polyacanthus
ENSSHAG00000018330	-	100	88.060	ENSAMEG00000013756	TNRC6C	52	88.806	Ailuropoda_melanoleuca
ENSSHAG00000018330	-	99	65.236	ENSACIG00000008075	tnrc6c1	55	66.134	Amphilophus_citrinellus
ENSSHAG00000018330	-	100	64.570	ENSAOCG00000023968	tnrc6c1	51	64.921	Amphiprion_ocellaris
ENSSHAG00000018330	-	100	64.076	ENSAPEG00000009020	tnrc6c1	51	64.921	Amphiprion_percula
ENSSHAG00000018330	-	100	88.532	ENSANAG00000021554	TNRC6C	52	85.946	Aotus_nancymaae
ENSSHAG00000018330	-	99	64.839	ENSACLG00000000424	tnrc6c1	53	65.635	Astatotilapia_calliptera
ENSSHAG00000018330	-	100	88.528	ENSBTAG00000018658	TNRC6C	53	88.745	Bos_taurus
ENSSHAG00000018330	-	100	88.317	ENSCJAG00000019431	TNRC6C	52	85.730	Callithrix_jacchus
ENSSHAG00000018330	-	100	89.274	ENSCAFG00000005224	TNRC6C	54	85.075	Canis_familiaris
ENSSHAG00000018330	-	100	88.400	ENSCAFG00020006661	TNRC6C	52	84.615	Canis_lupus_dingo
ENSSHAG00000018330	-	100	88.299	ENSCHIG00000026004	TNRC6C	56	84.392	Capra_hircus
ENSSHAG00000018330	-	100	90.584	ENSTSYG00000005403	TNRC6C	54	90.693	Carlito_syrichta
ENSSHAG00000018330	-	100	84.957	ENSCPOG00000000467	TNRC6C	51	85.714	Cavia_porcellus
ENSSHAG00000018330	-	100	89.622	ENSCCAG00000030524	TNRC6C	54	90.270	Cebus_capucinus
ENSSHAG00000018330	-	100	89.730	ENSCATG00000033135	TNRC6C	54	90.378	Cercocebus_atys
ENSSHAG00000018330	-	100	90.368	ENSCPBG00000027960	TNRC6C	52	91.126	Chrysemys_picta_bellii
ENSSHAG00000018330	-	100	89.622	ENSCANG00000041771	TNRC6C	54	90.270	Colobus_angolensis_palliatus
ENSSHAG00000018330	-	100	84.335	ENSCGRG00001022686	Tnrc6c	53	82.940	Cricetulus_griseus_chok1gshd
ENSSHAG00000018330	-	100	85.065	ENSCGRG00000018041	Tnrc6c	53	82.940	Cricetulus_griseus_crigri
ENSSHAG00000018330	-	100	70.732	ENSDARG00000076847	tnrc6c1	59	70.732	Danio_rerio
ENSSHAG00000018330	-	100	81.955	ENSDORG00000004558	Tnrc6c	52	81.633	Dipodomys_ordii
ENSSHAG00000018330	-	100	77.838	ENSETEG00000005527	TNRC6C	51	78.162	Echinops_telfairi
ENSSHAG00000018330	-	100	85.606	ENSEASG00005004799	TNRC6C	52	86.364	Equus_asinus_asinus
ENSSHAG00000018330	-	100	81.602	ENSEEUG00000010008	TNRC6C	51	81.818	Erinaceus_europaeus
ENSSHAG00000018330	-	100	87.111	ENSFCAG00000028358	TNRC6C	52	85.265	Felis_catus
ENSSHAG00000018330	-	100	89.282	ENSFALG00000000848	TNRC6C	55	89.386	Ficedula_albicollis
ENSSHAG00000018330	-	100	85.823	ENSFDAG00000010368	TNRC6C	51	86.580	Fukomys_damarensis
ENSSHAG00000018330	-	91	66.615	ENSFHEG00000002936	tnrc6c1	51	63.494	Fundulus_heteroclitus
ENSSHAG00000018330	-	100	92.749	ENSGALG00000001725	TNRC6C	51	93.506	Gallus_gallus
ENSSHAG00000018330	-	99	63.713	ENSGAFG00000019019	tnrc6c1	53	61.895	Gambusia_affinis
ENSSHAG00000018330	-	100	93.831	ENSGAGG00000022043	TNRC6C	51	94.589	Gopherus_agassizii
ENSSHAG00000018330	-	100	90.173	ENSGGOG00000011304	TNRC6C	54	90.065	Gorilla_gorilla
ENSSHAG00000018330	-	99	64.839	ENSHBUG00000010846	tnrc6c1	53	65.635	Haplochromis_burtoni
ENSSHAG00000018330	-	100	85.946	ENSSTOG00000009101	TNRC6C	51	86.595	Ictidomys_tridecemlineatus
ENSSHAG00000018330	-	100	63.057	ENSKMAG00000021023	tnrc6c1	56	61.596	Kryptolebias_marmoratus
ENSSHAG00000018330	-	100	74.173	ENSLOCG00000013377	tnrc6c1	50	73.864	Lepisosteus_oculatus
ENSSHAG00000018330	-	100	84.640	ENSLAFG00000011122	TNRC6C	51	83.316	Loxodonta_africana
ENSSHAG00000018330	-	100	89.730	ENSMFAG00000043943	TNRC6C	54	90.378	Macaca_fascicularis
ENSSHAG00000018330	-	100	89.730	ENSMMUG00000011924	TNRC6C	52	86.378	Macaca_mulatta
ENSSHAG00000018330	-	100	88.960	ENSMNEG00000030405	TNRC6C	52	86.378	Macaca_nemestrina
ENSSHAG00000018330	-	100	89.730	ENSMLEG00000033436	TNRC6C	54	90.378	Mandrillus_leucophaeus
ENSSHAG00000018330	-	100	63.685	ENSMAMG00000023613	tnrc6c1	56	65.180	Mastacembelus_armatus
ENSSHAG00000018330	-	99	64.839	ENSMZEG00005010920	tnrc6c1	53	65.635	Maylandia_zebra
ENSSHAG00000018330	-	100	84.013	ENSMAUG00000021618	Tnrc6c	53	84.335	Mesocricetus_auratus
ENSSHAG00000018330	-	100	90.162	ENSMICG00000003952	TNRC6C	54	90.811	Microcebus_murinus
ENSSHAG00000018330	-	100	85.606	ENSMOCG00000015879	Tnrc6c	51	86.255	Microtus_ochrogaster
ENSSHAG00000018330	-	100	62.080	ENSMMOG00000005203	tnrc6c1	55	62.395	Mola_mola
ENSSHAG00000018330	-	100	85.714	MGP_CAROLIEiJ_G0017465	Tnrc6c	51	86.364	Mus_caroli
ENSSHAG00000018330	-	100	85.173	ENSMUSG00000025571	Tnrc6c	51	85.823	Mus_musculus
ENSSHAG00000018330	-	100	85.498	MGP_PahariEiJ_G0018593	Tnrc6c	51	86.147	Mus_pahari
ENSSHAG00000018330	-	100	85.173	MGP_SPRETEiJ_G0018309	Tnrc6c	51	85.823	Mus_spretus
ENSSHAG00000018330	-	99	65.987	ENSNBRG00000005344	tnrc6c1	54	66.560	Neolamprologus_brichardi
ENSSHAG00000018330	-	100	85.931	ENSODEG00000012499	TNRC6C	52	86.688	Octodon_degus
ENSSHAG00000018330	-	99	63.291	ENSONIG00000002210	tnrc6c1	66	63.560	Oreochromis_niloticus
ENSSHAG00000018330	-	99	60.147	ENSORLG00000009837	tnrc6c1	100	68.773	Oryzias_latipes
ENSSHAG00000018330	-	99	61.805	ENSORLG00020016510	tnrc6c1	54	62.644	Oryzias_latipes_hni
ENSSHAG00000018330	-	99	62.749	ENSOMEG00000000357	tnrc6c1	51	63.589	Oryzias_melastigma
ENSSHAG00000018330	-	100	88.203	ENSOGAG00000007197	TNRC6C	54	88.312	Otolemur_garnettii
ENSSHAG00000018330	-	100	89.514	ENSPPAG00000027160	TNRC6C	54	90.162	Pan_paniscus
ENSSHAG00000018330	-	100	87.003	ENSPPRG00000018881	TNRC6C	52	85.157	Panthera_pardus
ENSSHAG00000018330	-	100	89.622	ENSPTRG00000009699	TNRC6C	54	90.270	Pan_troglodytes
ENSSHAG00000018330	-	100	88.960	ENSPANG00000019994	TNRC6C	52	86.378	Papio_anubis
ENSSHAG00000018330	-	100	65.016	ENSPKIG00000005428	tnrc6c1	56	64.248	Paramormyrops_kingsleyae
ENSSHAG00000018330	-	100	89.166	ENSPSIG00000018069	TNRC6C	51	89.924	Pelodiscus_sinensis
ENSSHAG00000018330	-	87	58.351	ENSPMGG00000022911	tnrc6c1	97	66.531	Periophthalmus_magnuspinnatus
ENSSHAG00000018330	-	100	84.764	ENSPEMG00000009785	Tnrc6c	52	80.687	Peromyscus_maniculatus_bairdii
ENSSHAG00000018330	-	100	63.191	ENSPFOG00000012560	tnrc6c1	76	60.676	Poecilia_formosa
ENSSHAG00000018330	-	100	63.762	ENSPLAG00000021055	tnrc6c1	57	64.034	Poecilia_latipinna
ENSSHAG00000018330	-	100	90.486	ENSPCOG00000021451	TNRC6C	54	91.135	Propithecus_coquereli
ENSSHAG00000018330	-	99	64.069	ENSPNYG00000014477	tnrc6c1	52	64.876	Pundamilia_nyererei
ENSSHAG00000018330	-	100	85.498	ENSRNOG00000022395	Tnrc6c	52	86.147	Rattus_norvegicus
ENSSHAG00000018330	-	100	89.838	ENSRBIG00000027777	TNRC6C	54	90.486	Rhinopithecus_bieti
ENSSHAG00000018330	-	100	89.838	ENSRROG00000042912	TNRC6C	54	90.486	Rhinopithecus_roxellana
ENSSHAG00000018330	-	100	88.973	ENSSBOG00000023981	TNRC6C	54	89.622	Saimiri_boliviensis_boliviensis
ENSSHAG00000018330	-	99	56.884	ENSSFOG00015004735	-	99	60.848	Scleropages_formosus
ENSSHAG00000018330	-	100	66.950	ENSSFOG00015006475	tnrc6c1	50	67.375	Scleropages_formosus
ENSSHAG00000018330	-	99	62.884	ENSSMAG00000012761	tnrc6c1	56	62.632	Scophthalmus_maximus
ENSSHAG00000018330	-	100	62.500	ENSSDUG00000002366	tnrc6c1	52	63.025	Seriola_dumerili
ENSSHAG00000018330	-	100	62.000	ENSSLDG00000025613	tnrc6c1	53	62.316	Seriola_lalandi_dorsalis
ENSSHAG00000018330	-	100	92.176	ENSSPUG00000007341	TNRC6C	59	92.926	Sphenodon_punctatus
ENSSHAG00000018330	-	100	86.674	ENSSSCG00000034373	TNRC6C	53	86.782	Sus_scrofa
ENSSHAG00000018330	-	100	88.649	ENSTGUG00000007733	TNRC6C	51	89.405	Taeniopygia_guttata
ENSSHAG00000018330	-	100	64.520	ENSTRUG00000011685	tnrc6c1	56	64.414	Takifugu_rubripes
ENSSHAG00000018330	-	100	64.021	ENSTNIG00000005273	tnrc6c1	93	63.598	Tetraodon_nigroviridis
ENSSHAG00000018330	-	76	86.946	ENSTBEG00000005046	TNRC6C	63	76.649	Tupaia_belangeri
ENSSHAG00000018330	-	100	86.024	ENSTTRG00000010828	TNRC6C	51	86.132	Tursiops_truncatus
ENSSHAG00000018330	-	79	72.442	ENSVPAG00000006765	-	79	73.214	Vicugna_pacos
ENSSHAG00000018330	-	100	86.024	ENSVVUG00000015268	TNRC6C	52	86.782	Vulpes_vulpes
ENSSHAG00000018330	-	100	79.656	ENSXETG00000019470	tnrc6c	53	79.225	Xenopus_tropicalis
ENSSHAG00000018330	-	100	61.489	ENSXMAG00000025971	tnrc6c1	53	61.740	Xiphophorus_maculatus