EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000018495 (Gene tree)
Gene ID: -
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 4904 bases
Position: chrGL834488.1:3659500-3664403
Accession: 24012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000021845	La	PF05383.17	1.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000022020	LARP6-201	1275	-	ENSSHAP00000021845	424 (aa)	-	G3X2E0

Gene Model

Click here to download ENSSHAG00000018495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018495	LARP6	100	75.701	ENSG00000166173	LARP6	100	77.419	Homo_sapiens
ENSSHAG00000018495	LARP6	97	56.410	ENSAPOG00000021773	larp6a	61	54.779	Acanthochromis_polyacanthus
ENSSHAG00000018495	LARP6	100	76.402	ENSAMEG00000008897	LARP6	100	76.402	Ailuropoda_melanoleuca
ENSSHAG00000018495	LARP6	97	57.343	ENSACIG00000005166	larp6a	83	55.478	Amphilophus_citrinellus
ENSSHAG00000018495	LARP6	99	56.064	ENSAOCG00000002284	larp6a	62	54.233	Amphiprion_ocellaris
ENSSHAG00000018495	LARP6	99	56.064	ENSAPEG00000008077	larp6a	83	54.462	Amphiprion_percula
ENSSHAG00000018495	LARP6	99	56.064	ENSATEG00000004018	larp6a	61	54.462	Anabas_testudineus
ENSSHAG00000018495	LARP6	98	68.632	ENSAPLG00000009914	LARP6	99	68.632	Anas_platyrhynchos
ENSSHAG00000018495	LARP6	96	67.476	ENSACAG00000008613	LARP6	97	67.640	Anolis_carolinensis
ENSSHAG00000018495	LARP6	100	75.000	ENSANAG00000024860	LARP6	87	75.000	Aotus_nancymaae
ENSSHAG00000018495	LARP6	97	57.343	ENSACLG00000018561	larp6a	59	55.245	Astatotilapia_calliptera
ENSSHAG00000018495	LARP6	99	40.682	ENSAMXG00000036816	-	95	40.714	Astyanax_mexicanus
ENSSHAG00000018495	LARP6	97	55.944	ENSAMXG00000029387	larp6a	65	56.279	Astyanax_mexicanus
ENSSHAG00000018495	LARP6	100	74.533	ENSBTAG00000003915	LARP6	87	74.533	Bos_taurus
ENSSHAG00000018495	LARP6	100	74.533	ENSCJAG00000046236	-	87	74.533	Callithrix_jacchus
ENSSHAG00000018495	LARP6	100	75.000	ENSCJAG00000018642	-	87	75.000	Callithrix_jacchus
ENSSHAG00000018495	LARP6	99	75.765	ENSCAFG00000017616	LARP6	99	75.765	Canis_familiaris
ENSSHAG00000018495	LARP6	100	75.467	ENSCAFG00020007296	LARP6	88	75.467	Canis_lupus_dingo
ENSSHAG00000018495	LARP6	100	75.234	ENSCHIG00000013742	LARP6	87	75.234	Capra_hircus
ENSSHAG00000018495	LARP6	99	74.118	ENSTSYG00000028124	LARP6	87	73.882	Carlito_syrichta
ENSSHAG00000018495	LARP6	99	74.292	ENSCAPG00000015452	LARP6	99	74.292	Cavia_aperea
ENSSHAG00000018495	LARP6	99	74.057	ENSCPOG00000022687	LARP6	86	74.057	Cavia_porcellus
ENSSHAG00000018495	LARP6	100	75.467	ENSCCAG00000036320	LARP6	87	75.467	Cebus_capucinus
ENSSHAG00000018495	LARP6	100	75.234	ENSCATG00000042432	LARP6	87	75.234	Cercocebus_atys
ENSSHAG00000018495	LARP6	100	75.935	ENSCLAG00000007893	LARP6	87	75.935	Chinchilla_lanigera
ENSSHAG00000018495	LARP6	100	75.467	ENSCSAG00000013672	LARP6	87	75.467	Chlorocebus_sabaeus
ENSSHAG00000018495	LARP6	100	74.766	ENSCHOG00000003318	LARP6	90	74.766	Choloepus_hoffmanni
ENSSHAG00000018495	LARP6	98	68.496	ENSCPBG00000010771	LARP6	82	68.171	Chrysemys_picta_bellii
ENSSHAG00000018495	LARP6	99	75.529	ENSCANG00000025833	LARP6	100	75.529	Colobus_angolensis_palliatus
ENSSHAG00000018495	LARP6	100	74.766	ENSCGRG00001024472	Larp6	87	74.766	Cricetulus_griseus_chok1gshd
ENSSHAG00000018495	LARP6	100	74.766	ENSCGRG00000004527	Larp6	87	74.766	Cricetulus_griseus_crigri
ENSSHAG00000018495	LARP6	97	57.009	ENSCSEG00000011196	larp6a	63	56.542	Cynoglossus_semilaevis
ENSSHAG00000018495	LARP6	99	56.064	ENSCVAG00000009605	larp6a	64	54.920	Cyprinodon_variegatus
ENSSHAG00000018495	LARP6	97	57.683	ENSDARG00000005355	larp6a	97	57.820	Danio_rerio
ENSSHAG00000018495	LARP6	100	74.533	ENSDNOG00000042993	LARP6	87	74.533	Dasypus_novemcinctus
ENSSHAG00000018495	LARP6	100	71.395	ENSDORG00000023910	Larp6	88	71.395	Dipodomys_ordii
ENSSHAG00000018495	LARP6	74	82.323	ENSETEG00000020390	LARP6	64	82.323	Echinops_telfairi
ENSSHAG00000018495	LARP6	100	76.402	ENSEASG00005005490	LARP6	64	76.402	Equus_asinus_asinus
ENSSHAG00000018495	LARP6	100	76.402	ENSECAG00000014190	LARP6	94	76.168	Equus_caballus
ENSSHAG00000018495	LARP6	97	57.506	ENSELUG00000007341	larp6a	62	57.044	Esox_lucius
ENSSHAG00000018495	LARP6	100	75.467	ENSFCAG00000001361	LARP6	87	75.467	Felis_catus
ENSSHAG00000018495	LARP6	99	66.355	ENSFALG00000012389	LARP6	91	66.355	Ficedula_albicollis
ENSSHAG00000018495	LARP6	100	75.935	ENSFDAG00000019994	LARP6	84	75.935	Fukomys_damarensis
ENSSHAG00000018495	LARP6	99	55.835	ENSFHEG00000010312	larp6a	62	54.005	Fundulus_heteroclitus
ENSSHAG00000018495	LARP6	51	67.606	ENSGMOG00000002119	larp6a	70	67.606	Gadus_morhua
ENSSHAG00000018495	LARP6	98	67.689	ENSGALG00000004046	LARP6	86	67.689	Gallus_gallus
ENSSHAG00000018495	LARP6	99	56.064	ENSGAFG00000009426	larp6a	64	54.920	Gambusia_affinis
ENSSHAG00000018495	LARP6	99	56.193	ENSGACG00000014622	larp6a	98	54.358	Gasterosteus_aculeatus
ENSSHAG00000018495	LARP6	89	68.504	ENSGAGG00000010802	LARP6	57	68.504	Gopherus_agassizii
ENSSHAG00000018495	LARP6	99	75.765	ENSGGOG00000024151	LARP6	100	75.765	Gorilla_gorilla
ENSSHAG00000018495	LARP6	97	57.343	ENSHBUG00000021014	larp6a	59	55.245	Haplochromis_burtoni
ENSSHAG00000018495	LARP6	99	75.878	ENSHGLG00000015112	LARP6	86	75.878	Heterocephalus_glaber_female
ENSSHAG00000018495	LARP6	99	76.000	ENSHGLG00100013159	LARP6	100	76.000	Heterocephalus_glaber_male
ENSSHAG00000018495	LARP6	99	56.092	ENSHCOG00000001241	larp6a	83	56.322	Hippocampus_comes
ENSSHAG00000018495	LARP6	97	39.759	ENSIPUG00000002828	-	96	38.942	Ictalurus_punctatus
ENSSHAG00000018495	LARP6	99	57.045	ENSIPUG00000010187	larp6	66	56.818	Ictalurus_punctatus
ENSSHAG00000018495	LARP6	100	76.402	ENSSTOG00000024279	LARP6	93	76.402	Ictidomys_tridecemlineatus
ENSSHAG00000018495	LARP6	99	74.764	ENSJJAG00000011013	Larp6	87	74.764	Jaculus_jaculus
ENSSHAG00000018495	LARP6	99	56.849	ENSKMAG00000001702	larp6a	59	56.621	Kryptolebias_marmoratus
ENSSHAG00000018495	LARP6	99	54.233	ENSLBEG00000000170	larp6a	82	52.632	Labrus_bergylta
ENSSHAG00000018495	LARP6	99	65.957	ENSLACG00000018706	LARP6	82	65.957	Latimeria_chalumnae
ENSSHAG00000018495	LARP6	97	40.732	ENSLACG00000002786	-	98	42.958	Latimeria_chalumnae
ENSSHAG00000018495	LARP6	99	44.470	ENSLOCG00000008547	-	84	41.667	Lepisosteus_oculatus
ENSSHAG00000018495	LARP6	97	60.094	ENSLOCG00000014592	larp6a	63	60.140	Lepisosteus_oculatus
ENSSHAG00000018495	LARP6	100	75.234	ENSLAFG00000016343	LARP6	96	75.234	Loxodonta_africana
ENSSHAG00000018495	LARP6	100	75.467	ENSMFAG00000035507	LARP6	95	75.467	Macaca_fascicularis
ENSSHAG00000018495	LARP6	100	75.467	ENSMMUG00000004429	LARP6	89	75.467	Macaca_mulatta
ENSSHAG00000018495	LARP6	100	75.467	ENSMNEG00000045335	LARP6	87	75.467	Macaca_nemestrina
ENSSHAG00000018495	LARP6	99	75.529	ENSMLEG00000038587	LARP6	100	75.529	Mandrillus_leucophaeus
ENSSHAG00000018495	LARP6	99	56.036	ENSMAMG00000005261	larp6a	62	54.442	Mastacembelus_armatus
ENSSHAG00000018495	LARP6	97	57.343	ENSMZEG00005005774	larp6a	59	55.245	Maylandia_zebra
ENSSHAG00000018495	LARP6	98	67.612	ENSMGAG00000005077	LARP6	99	67.612	Meleagris_gallopavo
ENSSHAG00000018495	LARP6	100	75.000	ENSMAUG00000018486	Larp6	87	75.000	Mesocricetus_auratus
ENSSHAG00000018495	LARP6	100	75.935	ENSMICG00000011234	LARP6	87	75.935	Microcebus_murinus
ENSSHAG00000018495	LARP6	100	74.533	ENSMOCG00000010492	Larp6	87	74.533	Microtus_ochrogaster
ENSSHAG00000018495	LARP6	99	56.782	ENSMMOG00000016284	larp6a	84	55.632	Mola_mola
ENSSHAG00000018495	LARP6	99	88.208	ENSMODG00000009034	LARP6	82	89.151	Monodelphis_domestica
ENSSHAG00000018495	LARP6	97	57.442	ENSMALG00000014439	larp6a	81	56.279	Monopterus_albus
ENSSHAG00000018495	LARP6	100	75.234	MGP_CAROLIEiJ_G0032314	Larp6	87	75.234	Mus_caroli
ENSSHAG00000018495	LARP6	100	75.467	ENSMUSG00000034839	Larp6	87	75.467	Mus_musculus
ENSSHAG00000018495	LARP6	100	75.234	MGP_PahariEiJ_G0015180	Larp6	87	75.234	Mus_pahari
ENSSHAG00000018495	LARP6	100	74.766	MGP_SPRETEiJ_G0033452	Larp6	87	74.766	Mus_spretus
ENSSHAG00000018495	LARP6	100	76.636	ENSMPUG00000017086	LARP6	100	76.636	Mustela_putorius_furo
ENSSHAG00000018495	LARP6	100	75.467	ENSMLUG00000010319	LARP6	87	75.467	Myotis_lucifugus
ENSSHAG00000018495	LARP6	100	73.364	ENSNGAG00000014238	Larp6	87	73.364	Nannospalax_galili
ENSSHAG00000018495	LARP6	97	57.110	ENSNBRG00000008120	larp6a	81	55.245	Neolamprologus_brichardi
ENSSHAG00000018495	LARP6	100	75.935	ENSNLEG00000013691	LARP6	87	75.935	Nomascus_leucogenys
ENSSHAG00000018495	LARP6	87	93.000	ENSMEUG00000002270	LARP6	75	93.000	Notamacropus_eugenii
ENSSHAG00000018495	LARP6	83	67.236	ENSOPRG00000004868	-	97	68.222	Ochotona_princeps
ENSSHAG00000018495	LARP6	98	75.845	ENSODEG00000015958	LARP6	85	75.663	Octodon_degus
ENSSHAG00000018495	LARP6	99	56.751	ENSONIG00000002901	larp6a	83	54.920	Oreochromis_niloticus
ENSSHAG00000018495	LARP6	99	70.406	ENSOCUG00000009306	LARP6	99	70.406	Oryctolagus_cuniculus
ENSSHAG00000018495	LARP6	97	57.907	ENSORLG00000014256	larp6a	83	56.279	Oryzias_latipes
ENSSHAG00000018495	LARP6	99	57.078	ENSORLG00020019657	larp6a	62	55.479	Oryzias_latipes_hni
ENSSHAG00000018495	LARP6	99	57.306	ENSORLG00015017915	larp6a	62	55.708	Oryzias_latipes_hsok
ENSSHAG00000018495	LARP6	99	57.306	ENSOMEG00000017049	larp6a	63	55.708	Oryzias_melastigma
ENSSHAG00000018495	LARP6	98	75.120	ENSOGAG00000000522	LARP6	87	75.234	Otolemur_garnettii
ENSSHAG00000018495	LARP6	100	75.000	ENSOARG00000018750	LARP6	99	75.000	Ovis_aries
ENSSHAG00000018495	LARP6	99	75.765	ENSPPAG00000031247	LARP6	100	75.765	Pan_paniscus
ENSSHAG00000018495	LARP6	100	75.701	ENSPPRG00000011282	LARP6	87	75.701	Panthera_pardus
ENSSHAG00000018495	LARP6	99	75.529	ENSPTIG00000015318	LARP6	86	75.529	Panthera_tigris_altaica
ENSSHAG00000018495	LARP6	100	75.701	ENSPTRG00000007234	LARP6	87	75.701	Pan_troglodytes
ENSSHAG00000018495	LARP6	100	75.467	ENSPANG00000016362	LARP6	87	75.467	Papio_anubis
ENSSHAG00000018495	LARP6	99	54.955	ENSPKIG00000004511	LARP6	64	55.856	Paramormyrops_kingsleyae
ENSSHAG00000018495	LARP6	97	59.716	ENSPKIG00000020103	larp6a	80	59.294	Paramormyrops_kingsleyae
ENSSHAG00000018495	LARP6	71	84.615	ENSPSIG00000009071	LARP6	92	84.615	Pelodiscus_sinensis
ENSSHAG00000018495	LARP6	99	57.078	ENSPMGG00000006958	larp6a	86	55.251	Periophthalmus_magnuspinnatus
ENSSHAG00000018495	LARP6	100	74.299	ENSPEMG00000012909	Larp6	87	74.299	Peromyscus_maniculatus_bairdii
ENSSHAG00000018495	LARP6	100	89.953	ENSPCIG00000020765	LARP6	83	89.953	Phascolarctos_cinereus
ENSSHAG00000018495	LARP6	99	56.293	ENSPFOG00000014175	larp6a	83	54.691	Poecilia_formosa
ENSSHAG00000018495	LARP6	99	56.064	ENSPLAG00000011105	larp6a	61	54.462	Poecilia_latipinna
ENSSHAG00000018495	LARP6	99	56.064	ENSPMEG00000011085	larp6a	62	54.920	Poecilia_mexicana
ENSSHAG00000018495	LARP6	99	55.835	ENSPREG00000008067	larp6a	62	54.691	Poecilia_reticulata
ENSSHAG00000018495	LARP6	100	75.701	ENSPPYG00000006604	LARP6	87	75.701	Pongo_abelii
ENSSHAG00000018495	LARP6	74	83.636	ENSPCAG00000014197	LARP6	76	83.636	Procavia_capensis
ENSSHAG00000018495	LARP6	100	75.000	ENSPCOG00000022934	LARP6	87	75.000	Propithecus_coquereli
ENSSHAG00000018495	LARP6	100	75.234	ENSPVAG00000005618	LARP6	87	75.234	Pteropus_vampyrus
ENSSHAG00000018495	LARP6	97	57.110	ENSPNYG00000009835	larp6a	81	55.245	Pundamilia_nyererei
ENSSHAG00000018495	LARP6	97	55.711	ENSPNAG00000017966	larp6a	70	56.019	Pygocentrus_nattereri
ENSSHAG00000018495	LARP6	100	75.000	ENSRNOG00000012438	Larp6	87	75.000	Rattus_norvegicus
ENSSHAG00000018495	LARP6	100	75.467	ENSRBIG00000032902	LARP6	88	75.467	Rhinopithecus_bieti
ENSSHAG00000018495	LARP6	100	75.467	ENSRROG00000043074	LARP6	87	75.467	Rhinopithecus_roxellana
ENSSHAG00000018495	LARP6	99	74.824	ENSSBOG00000024190	LARP6	100	74.824	Saimiri_boliviensis_boliviensis
ENSSHAG00000018495	LARP6	97	54.009	ENSSFOG00015002254	LARP6	80	52.123	Scleropages_formosus
ENSSHAG00000018495	LARP6	99	57.241	ENSSFOG00015023268	larp6a	84	57.471	Scleropages_formosus
ENSSHAG00000018495	LARP6	99	57.078	ENSSMAG00000009953	larp6a	61	55.708	Scophthalmus_maximus
ENSSHAG00000018495	LARP6	99	56.293	ENSSDUG00000007438	larp6a	61	54.691	Seriola_dumerili
ENSSHAG00000018495	LARP6	99	56.293	ENSSLDG00000016647	larp6a	62	54.691	Seriola_lalandi_dorsalis
ENSSHAG00000018495	LARP6	99	67.062	ENSSPUG00000011312	LARP6	99	67.062	Sphenodon_punctatus
ENSSHAG00000018495	LARP6	99	56.064	ENSSPAG00000020502	larp6a	62	54.233	Stegastes_partitus
ENSSHAG00000018495	LARP6	100	74.299	ENSSSCG00000004974	LARP6	87	74.299	Sus_scrofa
ENSSHAG00000018495	LARP6	98	66.430	ENSTGUG00000005808	LARP6	99	66.430	Taeniopygia_guttata
ENSSHAG00000018495	LARP6	97	56.845	ENSTRUG00000003151	larp6a	62	57.209	Takifugu_rubripes
ENSSHAG00000018495	LARP6	97	57.042	ENSTNIG00000011926	larp6a	85	56.808	Tetraodon_nigroviridis
ENSSHAG00000018495	LARP6	99	74.704	ENSTBEG00000015077	LARP6	99	74.704	Tupaia_belangeri
ENSSHAG00000018495	LARP6	100	75.701	ENSUAMG00000010467	LARP6	86	75.701	Ursus_americanus
ENSSHAG00000018495	LARP6	99	75.529	ENSVVUG00000015227	LARP6	95	75.529	Vulpes_vulpes
ENSSHAG00000018495	LARP6	99	68.571	ENSXETG00000020340	larp6	85	68.571	Xenopus_tropicalis
ENSSHAG00000018495	LARP6	99	56.064	ENSXCOG00000012654	larp6a	87	54.920	Xiphophorus_couchianus
ENSSHAG00000018495	LARP6	99	55.835	ENSXMAG00000021015	larp6a	59	54.691	Xiphophorus_maculatus