EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000018596 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 52886 bases
Position: chrGL834453.1:3792071-3844956
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000021971	RRM_1	PF00076.22	4.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000022147	-	681	-	ENSSHAP00000021971	227 (aa)	-	G3X2R6

Gene Model

Click here to download ENSSHAG00000018596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000018596	-	96	90.135	ENSSHAG00000009862	-	63	90.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018596	-	96	91.071	ENSAPLG00000014437	CPEB4	73	91.071	Anas_platyrhynchos
ENSSHAG00000018596	-	96	99.543	ENSBTAG00000015450	CPEB3	68	99.543	Bos_taurus
ENSSHAG00000018596	-	99	98.214	ENSCAFG00020001981	CPEB3	85	98.214	Canis_lupus_dingo
ENSSHAG00000018596	-	96	98.174	ENSCHOG00000000272	-	61	98.174	Choloepus_hoffmanni
ENSSHAG00000018596	-	96	99.087	ENSCGRG00000002839	Cpeb3	53	99.087	Cricetulus_griseus_crigri
ENSSHAG00000018596	-	96	99.087	ENSJJAG00000009135	Cpeb3	53	99.087	Jaculus_jaculus
ENSSHAG00000018596	-	96	94.521	ENSMALG00000009305	cpeb3	65	94.521	Monopterus_albus
ENSSHAG00000018596	-	96	99.087	MGP_CAROLIEiJ_G0022910	Cpeb3	53	99.087	Mus_caroli
ENSSHAG00000018596	-	96	99.087	ENSMUSG00000039652	Cpeb3	53	99.087	Mus_musculus
ENSSHAG00000018596	-	96	99.087	MGP_PahariEiJ_G0014405	Cpeb3	53	99.087	Mus_pahari
ENSSHAG00000018596	-	96	99.087	MGP_SPRETEiJ_G0023829	Cpeb3	53	99.087	Mus_spretus
ENSSHAG00000018596	-	96	99.087	ENSOANG00000015723	-	66	99.087	Ornithorhynchus_anatinus
ENSSHAG00000018596	-	95	99.537	ENSPTIG00000012018	CPEB3	72	99.537	Panthera_tigris_altaica
ENSSHAG00000018596	-	96	99.087	ENSSBOG00000035843	CPEB3	52	99.087	Saimiri_boliviensis_boliviensis
ENSSHAG00000018596	-	96	90.090	ENSSFOG00015018275	-	57	90.090	Scleropages_formosus
ENSSHAG00000018596	-	96	98.174	ENSSARG00000001994	CPEB3	60	98.174	Sorex_araneus
ENSSHAG00000018596	-	97	99.091	ENSSPUG00000003601	CPEB3	94	99.091	Sphenodon_punctatus
ENSSHAG00000018596	-	97	93.636	ENSTRUG00000011309	cpeb3	88	93.636	Takifugu_rubripes
ENSSHAG00000018596	-	97	99.091	ENSUAMG00000010827	CPEB3	81	99.091	Ursus_americanus
ENSSHAG00000018596	-	96	98.174	ENSUMAG00000001870	-	95	98.148	Ursus_maritimus
ENSSHAG00000018596	-	96	93.607	ENSXMAG00000007652	cpeb3	70	93.119	Xiphophorus_maculatus