EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000018641 (Gene tree)
Gene ID: 100921596
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 70935 bases
Position: chrGL849764.1:3862901-3933835
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000022021	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000022197	CHD5-201	5484	-	ENSSHAP00000022021	1828 (aa)	-	G3X2W6

Gene Model

Click here to download ENSSHAG00000018641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000018641	CHD5	99	65.018	ENSSHAG00000014412	CHD3	93	65.289
ENSSHAG00000018641	CHD5	65	88.696	ENSSHAG00000015079	-	90	88.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018641	CHD5	99	86.484	ENSG00000116254	CHD5	96	88.770	Homo_sapiens
ENSSHAG00000018641	CHD5	100	85.609	ENSAMEG00000009880	CHD5	98	85.556	Ailuropoda_melanoleuca
ENSSHAG00000018641	CHD5	97	72.520	ENSACIG00000012582	chd5	98	72.419	Amphilophus_citrinellus
ENSSHAG00000018641	CHD5	97	73.233	ENSAOCG00000020356	chd5	90	73.112	Amphiprion_ocellaris
ENSSHAG00000018641	CHD5	98	76.223	ENSAPLG00000015475	CHD5	98	76.486	Anas_platyrhynchos
ENSSHAG00000018641	CHD5	99	79.968	ENSACAG00000002441	CHD5	95	79.768	Anolis_carolinensis
ENSSHAG00000018641	CHD5	90	87.302	ENSANAG00000001078	CHD5	91	87.360	Aotus_nancymaae
ENSSHAG00000018641	CHD5	97	69.276	ENSACLG00000003012	chd5	96	69.438	Astatotilapia_calliptera
ENSSHAG00000018641	CHD5	95	70.520	ENSAMXG00000008921	chd5	99	71.002	Astyanax_mexicanus
ENSSHAG00000018641	CHD5	96	86.802	ENSBTAG00000040477	CHD5	99	86.857	Bos_taurus
ENSSHAG00000018641	CHD5	99	86.272	ENSCJAG00000000101	CHD5	96	86.325	Callithrix_jacchus
ENSSHAG00000018641	CHD5	96	86.685	ENSCAFG00000019545	CHD5	99	86.630	Canis_familiaris
ENSSHAG00000018641	CHD5	100	86.392	ENSCAFG00020008689	CHD5	94	86.340	Canis_lupus_dingo
ENSSHAG00000018641	CHD5	100	85.451	ENSCHIG00000015027	CHD5	94	85.503	Capra_hircus
ENSSHAG00000018641	CHD5	99	82.032	ENSTSYG00000033991	CHD5	97	81.951	Carlito_syrichta
ENSSHAG00000018641	CHD5	99	86.304	ENSCAPG00000009294	CHD5	98	86.272	Cavia_aperea
ENSSHAG00000018641	CHD5	99	86.251	ENSCPOG00000025080	CHD5	98	86.220	Cavia_porcellus
ENSSHAG00000018641	CHD5	99	86.325	ENSCCAG00000024756	CHD5	96	86.378	Cebus_capucinus
ENSSHAG00000018641	CHD5	99	85.797	ENSCATG00000043011	CHD5	96	85.797	Cercocebus_atys
ENSSHAG00000018641	CHD5	99	86.039	ENSCLAG00000010589	CHD5	97	86.167	Chinchilla_lanigera
ENSSHAG00000018641	CHD5	99	86.589	ENSCSAG00000000733	CHD5	96	86.589	Chlorocebus_sabaeus
ENSSHAG00000018641	CHD5	96	86.137	ENSCPBG00000019363	CHD5	99	86.027	Chrysemys_picta_bellii
ENSSHAG00000018641	CHD5	99	86.536	ENSCANG00000032302	CHD5	97	86.536	Colobus_angolensis_palliatus
ENSSHAG00000018641	CHD5	58	92.850	ENSCGRG00001011042	Chd5	100	92.756	Cricetulus_griseus_chok1gshd
ENSSHAG00000018641	CHD5	99	85.367	ENSCGRG00000011341	Chd5	97	85.322	Cricetulus_griseus_crigri
ENSSHAG00000018641	CHD5	99	71.466	ENSDARG00000105083	chd5	97	72.745	Danio_rerio
ENSSHAG00000018641	CHD5	96	63.660	ENSDARG00000025789	chd4b	91	64.418	Danio_rerio
ENSSHAG00000018641	CHD5	96	92.345	ENSDNOG00000046342	CHD5	90	92.264	Dasypus_novemcinctus
ENSSHAG00000018641	CHD5	99	85.994	ENSDORG00000005923	Chd5	98	85.383	Dipodomys_ordii
ENSSHAG00000018641	CHD5	100	84.757	ENSEASG00005021464	CHD5	99	83.496	Equus_asinus_asinus
ENSSHAG00000018641	CHD5	100	84.341	ENSECAG00000025043	CHD5	98	86.749	Equus_caballus
ENSSHAG00000018641	CHD5	75	91.045	ENSEEUG00000002772	CHD5	74	89.688	Erinaceus_europaeus
ENSSHAG00000018641	CHD5	97	69.653	ENSELUG00000010742	chd5	92	76.394	Esox_lucius
ENSSHAG00000018641	CHD5	99	85.850	ENSFCAG00000006319	CHD5	96	86.061	Felis_catus
ENSSHAG00000018641	CHD5	100	84.405	ENSFALG00000009740	CHD5	97	84.352	Ficedula_albicollis
ENSSHAG00000018641	CHD5	99	85.790	ENSFDAG00000012881	CHD5	95	85.614	Fukomys_damarensis
ENSSHAG00000018641	CHD5	99	84.444	ENSGALG00000000747	CHD5	97	85.079	Gallus_gallus
ENSSHAG00000018641	CHD5	60	81.685	ENSGACG00000004389	chd5	93	81.793	Gasterosteus_aculeatus
ENSSHAG00000018641	CHD5	99	82.810	ENSGAGG00000001590	CHD5	99	85.542	Gopherus_agassizii
ENSSHAG00000018641	CHD5	99	86.484	ENSGGOG00000000708	CHD5	98	86.484	Gorilla_gorilla
ENSSHAG00000018641	CHD5	97	70.547	ENSHBUG00000013453	chd5	96	70.330	Haplochromis_burtoni
ENSSHAG00000018641	CHD5	99	85.775	ENSHGLG00000018184	CHD5	99	85.797	Heterocephalus_glaber_female
ENSSHAG00000018641	CHD5	99	79.694	ENSHGLG00100013261	CHD5	95	79.663	Heterocephalus_glaber_male
ENSSHAG00000018641	CHD5	97	72.629	ENSIPUG00000005446	chd5	98	72.717	Ictalurus_punctatus
ENSSHAG00000018641	CHD5	100	85.954	ENSSTOG00000002778	CHD5	97	86.006	Ictidomys_tridecemlineatus
ENSSHAG00000018641	CHD5	99	85.828	ENSJJAG00000019072	Chd5	96	85.797	Jaculus_jaculus
ENSSHAG00000018641	CHD5	99	75.947	ENSLOCG00000004944	chd5	94	75.588	Lepisosteus_oculatus
ENSSHAG00000018641	CHD5	99	87.110	ENSLAFG00000006348	CHD5	98	87.025	Loxodonta_africana
ENSSHAG00000018641	CHD5	99	86.589	ENSMFAG00000033993	CHD5	99	86.740	Macaca_fascicularis
ENSSHAG00000018641	CHD5	99	86.589	ENSMMUG00000016838	CHD5	97	86.589	Macaca_mulatta
ENSSHAG00000018641	CHD5	99	86.589	ENSMNEG00000040044	CHD5	96	86.589	Macaca_nemestrina
ENSSHAG00000018641	CHD5	99	83.316	ENSMLEG00000039166	CHD5	98	83.333	Mandrillus_leucophaeus
ENSSHAG00000018641	CHD5	97	69.082	ENSMZEG00005000841	chd5	91	76.928	Maylandia_zebra
ENSSHAG00000018641	CHD5	100	84.344	ENSMGAG00000001055	CHD5	97	84.976	Meleagris_gallopavo
ENSSHAG00000018641	CHD5	99	84.135	ENSMICG00000017862	CHD5	96	84.002	Microcebus_murinus
ENSSHAG00000018641	CHD5	99	85.722	ENSMOCG00000011049	Chd5	96	85.692	Microtus_ochrogaster
ENSSHAG00000018641	CHD5	94	83.943	ENSMODG00000006294	CHD5	85	83.943	Monodelphis_domestica
ENSSHAG00000018641	CHD5	97	72.147	ENSMALG00000002831	chd5	96	71.900	Monopterus_albus
ENSSHAG00000018641	CHD5	99	85.246	MGP_CAROLIEiJ_G0026857	Chd5	96	85.216	Mus_caroli
ENSSHAG00000018641	CHD5	99	85.005	ENSMUSG00000005045	Chd5	96	84.924	Mus_musculus
ENSSHAG00000018641	CHD5	99	85.140	MGP_PahariEiJ_G0029205	Chd5	96	85.164	Mus_pahari
ENSSHAG00000018641	CHD5	99	85.193	MGP_SPRETEiJ_G0027850	Chd5	96	85.164	Mus_spretus
ENSSHAG00000018641	CHD5	99	81.837	ENSMPUG00000007122	CHD5	94	88.608	Mustela_putorius_furo
ENSSHAG00000018641	CHD5	100	84.546	ENSNGAG00000019812	Chd5	94	84.335	Nannospalax_galili
ENSSHAG00000018641	CHD5	99	86.167	ENSNLEG00000010320	CHD5	98	85.729	Nomascus_leucogenys
ENSSHAG00000018641	CHD5	87	84.000	ENSOPRG00000004304	CHD5	85	82.960	Ochotona_princeps
ENSSHAG00000018641	CHD5	99	85.903	ENSODEG00000010262	CHD5	98	86.008	Octodon_degus
ENSSHAG00000018641	CHD5	97	71.878	ENSONIG00000000619	chd5	93	71.763	Oreochromis_niloticus
ENSSHAG00000018641	CHD5	99	66.925	ENSOANG00000001819	CHD5	98	66.511	Ornithorhynchus_anatinus
ENSSHAG00000018641	CHD5	99	84.989	ENSOGAG00000005703	CHD5	94	86.670	Otolemur_garnettii
ENSSHAG00000018641	CHD5	98	85.376	ENSOARG00000013425	CHD5	96	85.430	Ovis_aries
ENSSHAG00000018641	CHD5	99	86.332	ENSPPAG00000034048	CHD5	98	86.385	Pan_paniscus
ENSSHAG00000018641	CHD5	99	85.216	ENSPPRG00000009453	CHD5	96	85.428	Panthera_pardus
ENSSHAG00000018641	CHD5	99	79.407	ENSPTIG00000013926	CHD5	98	79.563	Panthera_tigris_altaica
ENSSHAG00000018641	CHD5	99	86.332	ENSPTRG00000000075	CHD5	96	86.385	Pan_troglodytes
ENSSHAG00000018641	CHD5	99	86.695	ENSPANG00000006765	CHD5	96	86.695	Papio_anubis
ENSSHAG00000018641	CHD5	97	71.998	ENSPKIG00000004282	chd5	95	77.152	Paramormyrops_kingsleyae
ENSSHAG00000018641	CHD5	99	80.993	ENSPSIG00000006414	CHD5	100	80.731	Pelodiscus_sinensis
ENSSHAG00000018641	CHD5	71	92.675	ENSPEMG00000014799	Chd5	97	92.615	Peromyscus_maniculatus_bairdii
ENSSHAG00000018641	CHD5	99	92.275	ENSPCIG00000028310	CHD5	95	92.275	Phascolarctos_cinereus
ENSSHAG00000018641	CHD5	97	70.733	ENSPLAG00000005343	chd5	92	85.897	Poecilia_latipinna
ENSSHAG00000018641	CHD5	99	84.055	ENSPPYG00000001952	CHD5	98	83.492	Pongo_abelii
ENSSHAG00000018641	CHD5	99	86.779	ENSPCOG00000022930	CHD5	96	86.800	Propithecus_coquereli
ENSSHAG00000018641	CHD5	97	72.496	ENSPNYG00000003183	chd5	98	71.452	Pundamilia_nyererei
ENSSHAG00000018641	CHD5	99	85.140	ENSRNOG00000011268	Chd5	97	85.066	Rattus_norvegicus
ENSSHAG00000018641	CHD5	97	90.560	ENSRBIG00000032140	CHD5	94	91.195	Rhinopithecus_bieti
ENSSHAG00000018641	CHD5	99	86.484	ENSRROG00000041146	CHD5	96	86.484	Rhinopithecus_roxellana
ENSSHAG00000018641	CHD5	99	82.100	ENSSBOG00000001955	CHD5	99	86.053	Saimiri_boliviensis_boliviensis
ENSSHAG00000018641	CHD5	99	71.835	ENSSFOG00015006296	chd5	94	72.093	Scleropages_formosus
ENSSHAG00000018641	CHD5	97	72.855	ENSSDUG00000017526	chd5	94	76.660	Seriola_dumerili
ENSSHAG00000018641	CHD5	100	80.097	ENSSPUG00000010622	CHD5	98	79.138	Sphenodon_punctatus
ENSSHAG00000018641	CHD5	98	86.253	ENSSSCG00000003366	CHD5	99	86.120	Sus_scrofa
ENSSHAG00000018641	CHD5	96	78.785	ENSTGUG00000002634	-	99	79.024	Taeniopygia_guttata
ENSSHAG00000018641	CHD5	56	79.843	ENSTNIG00000004346	chd5	99	80.607	Tetraodon_nigroviridis
ENSSHAG00000018641	CHD5	99	84.266	ENSTTRG00000010468	CHD5	97	84.266	Tursiops_truncatus
ENSSHAG00000018641	CHD5	100	86.340	ENSUAMG00000024509	CHD5	92	92.456	Ursus_americanus
ENSSHAG00000018641	CHD5	99	83.449	ENSUMAG00000024173	CHD5	98	83.289	Ursus_maritimus
ENSSHAG00000018641	CHD5	100	85.240	ENSVVUG00000026480	CHD5	96	85.156	Vulpes_vulpes
ENSSHAG00000018641	CHD5	99	73.654	ENSXETG00000002904	chd5	100	73.340	Xenopus_tropicalis
ENSSHAG00000018641	CHD5	58	80.766	ENSXCOG00000014202	chd5	93	79.833	Xiphophorus_couchianus