EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000018725 (Gene tree)
Gene ID: 100926353
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 95612 bases
Position: chrGL834743.1:3991880-4087491
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000022126	PPR	PF01535.20	3.4e-33	1	6
ENSSHAP00000022126	PPR	PF01535.20	3.4e-33	2	6
ENSSHAP00000022126	PPR	PF01535.20	3.4e-33	3	6
ENSSHAP00000022126	PPR	PF01535.20	3.4e-33	4	6
ENSSHAP00000022126	PPR	PF01535.20	3.4e-33	5	6
ENSSHAP00000022126	PPR	PF01535.20	3.4e-33	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000022303	LRPPRC-201	6459	-	ENSSHAP00000022126	1346 (aa)	-	G3X371

Gene Model

Click here to download ENSSHAG00000018725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018725's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018725	LRPPRC	99	51.216	ENSAPOG00000016610	lrpprc	94	51.216	Acanthochromis_polyacanthus
ENSSHAG00000018725	LRPPRC	99	66.966	ENSAMEG00000005852	LRPPRC	99	65.352	Ailuropoda_melanoleuca
ENSSHAG00000018725	LRPPRC	99	49.775	ENSACIG00000009604	lrpprc	93	49.775	Amphilophus_citrinellus
ENSSHAG00000018725	LRPPRC	99	51.401	ENSAOCG00000005886	lrpprc	94	51.401	Amphiprion_ocellaris
ENSSHAG00000018725	LRPPRC	99	49.073	ENSAPEG00000002937	lrpprc	93	49.073	Amphiprion_percula
ENSSHAG00000018725	LRPPRC	91	59.234	ENSATEG00000010555	lrpprc	95	59.234	Anabas_testudineus
ENSSHAG00000018725	LRPPRC	99	61.333	ENSACAG00000029278	LRPPRC	96	61.333	Anolis_carolinensis
ENSSHAG00000018725	LRPPRC	99	65.433	ENSANAG00000027440	LRPPRC	96	65.729	Aotus_nancymaae
ENSSHAG00000018725	LRPPRC	98	50.112	ENSACLG00000023712	lrpprc	97	50.112	Astatotilapia_calliptera
ENSSHAG00000018725	LRPPRC	99	65.433	ENSCJAG00000000794	LRPPRC	96	65.655	Callithrix_jacchus
ENSSHAG00000018725	LRPPRC	100	67.407	ENSCHIG00000020173	LRPPRC	98	67.407	Capra_hircus
ENSSHAG00000018725	LRPPRC	99	51.947	ENSCAPG00000013631	LRPPRC	99	51.947	Cavia_aperea
ENSSHAG00000018725	LRPPRC	89	66.197	ENSCPOG00000000204	LRPPRC	99	66.197	Cavia_porcellus
ENSSHAG00000018725	LRPPRC	99	65.259	ENSCCAG00000031900	LRPPRC	96	65.259	Cebus_capucinus
ENSSHAG00000018725	LRPPRC	99	66.716	ENSCATG00000014187	LRPPRC	90	70.894	Cercocebus_atys
ENSSHAG00000018725	LRPPRC	99	65.059	ENSCLAG00000005203	LRPPRC	96	65.059	Chinchilla_lanigera
ENSSHAG00000018725	LRPPRC	99	66.493	ENSCSAG00000013233	LRPPRC	96	66.667	Chlorocebus_sabaeus
ENSSHAG00000018725	LRPPRC	84	66.145	ENSCHOG00000003631	LRPPRC	81	66.145	Choloepus_hoffmanni
ENSSHAG00000018725	LRPPRC	99	63.973	ENSCANG00000034961	LRPPRC	99	75.000	Colobus_angolensis_palliatus
ENSSHAG00000018725	LRPPRC	99	63.967	ENSCGRG00001016261	Lrpprc	96	63.967	Cricetulus_griseus_chok1gshd
ENSSHAG00000018725	LRPPRC	99	63.967	ENSCGRG00000004072	Lrpprc	96	63.967	Cricetulus_griseus_crigri
ENSSHAG00000018725	LRPPRC	99	41.194	ENSCSEG00000003850	lrpprc	85	51.034	Cynoglossus_semilaevis
ENSSHAG00000018725	LRPPRC	99	51.486	ENSCVAG00000012967	lrpprc	94	51.486	Cyprinodon_variegatus
ENSSHAG00000018725	LRPPRC	99	49.963	ENSDARG00000043970	lrpprc	92	49.963	Danio_rerio
ENSSHAG00000018725	LRPPRC	82	51.496	ENSDNOG00000032336	-	95	51.496	Dasypus_novemcinctus
ENSSHAG00000018725	LRPPRC	99	66.146	ENSDNOG00000012594	-	96	66.220	Dasypus_novemcinctus
ENSSHAG00000018725	LRPPRC	99	66.196	ENSDORG00000012233	Lrpprc	96	66.196	Dipodomys_ordii
ENSSHAG00000018725	LRPPRC	100	65.581	ENSETEG00000006657	LRPPRC	96	65.581	Echinops_telfairi
ENSSHAG00000018725	LRPPRC	86	56.225	ENSEEUG00000012340	LRPPRC	90	56.225	Erinaceus_europaeus
ENSSHAG00000018725	LRPPRC	99	50.149	ENSELUG00000012803	lrpprc	98	50.149	Esox_lucius
ENSSHAG00000018725	LRPPRC	99	67.632	ENSFCAG00000013468	LRPPRC	96	67.632	Felis_catus
ENSSHAG00000018725	LRPPRC	99	56.704	ENSFALG00000012738	LRPPRC	99	56.704	Ficedula_albicollis
ENSSHAG00000018725	LRPPRC	99	63.858	ENSFDAG00000015328	LRPPRC	96	63.858	Fukomys_damarensis
ENSSHAG00000018725	LRPPRC	99	50.778	ENSFHEG00000019604	lrpprc	94	50.778	Fundulus_heteroclitus
ENSSHAG00000018725	LRPPRC	99	48.483	ENSGMOG00000008337	lrpprc	96	48.483	Gadus_morhua
ENSSHAG00000018725	LRPPRC	99	50.778	ENSGAFG00000001455	lrpprc	95	50.778	Gambusia_affinis
ENSSHAG00000018725	LRPPRC	99	51.371	ENSGACG00000010679	lrpprc	99	51.365	Gasterosteus_aculeatus
ENSSHAG00000018725	LRPPRC	98	52.353	ENSHBUG00000000393	lrpprc	91	52.353	Haplochromis_burtoni
ENSSHAG00000018725	LRPPRC	99	64.767	ENSHGLG00000006123	LRPPRC	96	64.767	Heterocephalus_glaber_female
ENSSHAG00000018725	LRPPRC	61	63.866	ENSHGLG00100005960	-	99	63.866	Heterocephalus_glaber_male
ENSSHAG00000018725	LRPPRC	97	49.962	ENSHCOG00000002107	lrpprc	95	49.962	Hippocampus_comes
ENSSHAG00000018725	LRPPRC	99	52.802	ENSIPUG00000009406	lrpprc	93	52.802	Ictalurus_punctatus
ENSSHAG00000018725	LRPPRC	99	67.013	ENSSTOG00000011185	LRPPRC	96	67.013	Ictidomys_tridecemlineatus
ENSSHAG00000018725	LRPPRC	99	66.297	ENSJJAG00000020475	Lrpprc	97	66.297	Jaculus_jaculus
ENSSHAG00000018725	LRPPRC	98	46.931	ENSKMAG00000003287	lrpprc	81	46.931	Kryptolebias_marmoratus
ENSSHAG00000018725	LRPPRC	99	46.519	ENSLBEG00000023225	lrpprc	87	57.753	Labrus_bergylta
ENSSHAG00000018725	LRPPRC	99	60.400	ENSLACG00000014030	LRPPRC	94	60.400	Latimeria_chalumnae
ENSSHAG00000018725	LRPPRC	97	57.121	ENSLOCG00000016390	lrpprc	90	57.121	Lepisosteus_oculatus
ENSSHAG00000018725	LRPPRC	99	64.169	ENSLAFG00000008614	LRPPRC	96	64.169	Loxodonta_africana
ENSSHAG00000018725	LRPPRC	99	66.642	ENSMFAG00000041560	LRPPRC	99	82.609	Macaca_fascicularis
ENSSHAG00000018725	LRPPRC	99	65.750	ENSMMUG00000019841	LRPPRC	99	82.126	Macaca_mulatta
ENSSHAG00000018725	LRPPRC	99	66.790	ENSMNEG00000031613	LRPPRC	96	66.964	Macaca_nemestrina
ENSSHAG00000018725	LRPPRC	98	47.695	ENSMAMG00000021835	lrpprc	94	47.976	Mastacembelus_armatus
ENSSHAG00000018725	LRPPRC	98	52.577	ENSMZEG00005027379	lrpprc	93	52.577	Maylandia_zebra
ENSSHAG00000018725	LRPPRC	99	64.190	ENSMAUG00000012118	Lrpprc	99	63.366	Mesocricetus_auratus
ENSSHAG00000018725	LRPPRC	100	67.728	ENSMICG00000010486	LRPPRC	96	67.728	Microcebus_murinus
ENSSHAG00000018725	LRPPRC	99	65.776	ENSMOCG00000006048	Lrpprc	96	65.776	Microtus_ochrogaster
ENSSHAG00000018725	LRPPRC	93	58.974	ENSMMOG00000007830	lrpprc	93	58.974	Mola_mola
ENSSHAG00000018725	LRPPRC	99	79.941	ENSMODG00000000648	LRPPRC	99	79.941	Monodelphis_domestica
ENSSHAG00000018725	LRPPRC	98	49.888	ENSMALG00000001271	lrpprc	93	50.112	Monopterus_albus
ENSSHAG00000018725	LRPPRC	99	66.296	ENSMPUG00000011800	LRPPRC	96	69.050	Mustela_putorius_furo
ENSSHAG00000018725	LRPPRC	99	68.304	ENSMLUG00000010575	LRPPRC	96	68.304	Myotis_lucifugus
ENSSHAG00000018725	LRPPRC	99	66.171	ENSNGAG00000013069	Lrpprc	96	66.171	Nannospalax_galili
ENSSHAG00000018725	LRPPRC	93	57.710	ENSNBRG00000013202	lrpprc	99	57.710	Neolamprologus_brichardi
ENSSHAG00000018725	LRPPRC	99	64.881	ENSNLEG00000016782	LRPPRC	96	64.881	Nomascus_leucogenys
ENSSHAG00000018725	LRPPRC	92	60.000	ENSOPRG00000016774	LRPPRC	89	60.000	Ochotona_princeps
ENSSHAG00000018725	LRPPRC	99	65.604	ENSODEG00000011211	LRPPRC	96	65.604	Octodon_degus
ENSSHAG00000018725	LRPPRC	99	52.003	ENSONIG00000000917	lrpprc	95	51.634	Oreochromis_niloticus
ENSSHAG00000018725	LRPPRC	56	57.627	ENSOANG00000014670	-	100	58.018	Ornithorhynchus_anatinus
ENSSHAG00000018725	LRPPRC	100	66.593	ENSOCUG00000015046	LRPPRC	92	66.593	Oryctolagus_cuniculus
ENSSHAG00000018725	LRPPRC	99	49.703	ENSORLG00000004605	lrpprc	97	48.435	Oryzias_latipes
ENSSHAG00000018725	LRPPRC	95	51.006	ENSORLG00020012536	lrpprc	99	50.558	Oryzias_latipes_hni
ENSSHAG00000018725	LRPPRC	99	58.520	ENSORLG00015018270	lrpprc	87	57.616	Oryzias_latipes_hsok
ENSSHAG00000018725	LRPPRC	99	66.271	ENSOGAG00000012798	LRPPRC	96	66.271	Otolemur_garnettii
ENSSHAG00000018725	LRPPRC	100	68.047	ENSOARG00000006522	LRPPRC	96	68.047	Ovis_aries
ENSSHAG00000018725	LRPPRC	99	64.736	ENSPPAG00000040876	LRPPRC	96	64.688	Pan_paniscus
ENSSHAG00000018725	LRPPRC	99	67.335	ENSPPRG00000006578	LRPPRC	96	67.335	Panthera_pardus
ENSSHAG00000018725	LRPPRC	99	67.409	ENSPTIG00000000933	LRPPRC	96	67.409	Panthera_tigris_altaica
ENSSHAG00000018725	LRPPRC	99	66.369	ENSPTRG00000011880	LRPPRC	96	66.369	Pan_troglodytes
ENSSHAG00000018725	LRPPRC	99	66.914	ENSPANG00000020731	LRPPRC	90	71.102	Papio_anubis
ENSSHAG00000018725	LRPPRC	99	44.139	ENSPKIG00000022232	lrpprc	98	47.632	Paramormyrops_kingsleyae
ENSSHAG00000018725	LRPPRC	64	62.384	ENSPSIG00000006830	-	99	62.384	Pelodiscus_sinensis
ENSSHAG00000018725	LRPPRC	69	43.087	ENSPMGG00000016597	lrpprc	96	43.087	Periophthalmus_magnuspinnatus
ENSSHAG00000018725	LRPPRC	97	44.478	ENSPMAG00000002147	lrpprc	99	44.478	Petromyzon_marinus
ENSSHAG00000018725	LRPPRC	99	50.149	ENSPFOG00000011227	lrpprc	97	50.111	Poecilia_formosa
ENSSHAG00000018725	LRPPRC	99	50.000	ENSPLAG00000004018	lrpprc	95	50.000	Poecilia_latipinna
ENSSHAG00000018725	LRPPRC	99	50.223	ENSPMEG00000016425	lrpprc	95	50.223	Poecilia_mexicana
ENSSHAG00000018725	LRPPRC	99	49.777	ENSPREG00000003662	lrpprc	95	49.777	Poecilia_reticulata
ENSSHAG00000018725	LRPPRC	59	63.705	ENSPPYG00000029532	-	99	63.705	Pongo_abelii
ENSSHAG00000018725	LRPPRC	83	65.602	ENSPCAG00000001430	LRPPRC	81	65.602	Procavia_capensis
ENSSHAG00000018725	LRPPRC	99	65.279	ENSPVAG00000002007	LRPPRC	96	65.279	Pteropus_vampyrus
ENSSHAG00000018725	LRPPRC	97	49.583	ENSPNYG00000000756	lrpprc	94	49.583	Pundamilia_nyererei
ENSSHAG00000018725	LRPPRC	99	53.642	ENSPNAG00000002895	lrpprc	95	53.642	Pygocentrus_nattereri
ENSSHAG00000018725	LRPPRC	99	63.988	ENSRNOG00000005877	Lrpprc	96	64.116	Rattus_norvegicus
ENSSHAG00000018725	LRPPRC	99	65.115	ENSRBIG00000031552	LRPPRC	96	65.288	Rhinopithecus_bieti
ENSSHAG00000018725	LRPPRC	99	65.085	ENSSBOG00000011807	LRPPRC	96	65.259	Saimiri_boliviensis_boliviensis
ENSSHAG00000018725	LRPPRC	98	51.935	ENSSFOG00015001042	lrpprc	93	51.935	Scleropages_formosus
ENSSHAG00000018725	LRPPRC	99	50.740	ENSSDUG00000019062	lrpprc	94	50.740	Seriola_dumerili
ENSSHAG00000018725	LRPPRC	99	42.783	ENSSLDG00000023028	lrpprc	96	42.985	Seriola_lalandi_dorsalis
ENSSHAG00000018725	LRPPRC	90	58.852	ENSSARG00000000426	LRPPRC	100	58.852	Sorex_araneus
ENSSHAG00000018725	LRPPRC	99	47.311	ENSSPAG00000000162	lrpprc	95	47.311	Stegastes_partitus
ENSSHAG00000018725	LRPPRC	99	67.634	ENSSSCG00000008452	LRPPRC	96	67.634	Sus_scrofa
ENSSHAG00000018725	LRPPRC	97	56.027	ENSTGUG00000003759	LRPPRC	99	56.027	Taeniopygia_guttata
ENSSHAG00000018725	LRPPRC	99	51.761	ENSTRUG00000008409	lrpprc	91	51.761	Takifugu_rubripes
ENSSHAG00000018725	LRPPRC	99	50.297	ENSTNIG00000007470	lrpprc	99	50.111	Tetraodon_nigroviridis
ENSSHAG00000018725	LRPPRC	99	65.924	ENSTTRG00000006403	LRPPRC	96	65.924	Tursiops_truncatus
ENSSHAG00000018725	LRPPRC	99	63.474	ENSVPAG00000008993	LRPPRC	99	63.474	Vicugna_pacos
ENSSHAG00000018725	LRPPRC	99	59.821	ENSXETG00000009296	lrpprc	96	60.223	Xenopus_tropicalis
ENSSHAG00000018725	LRPPRC	98	47.199	ENSXCOG00000013343	lrpprc	87	55.056	Xiphophorus_couchianus
ENSSHAG00000018725	LRPPRC	99	50.703	ENSXMAG00000018108	lrpprc	95	50.703	Xiphophorus_maculatus