EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000018792 (Gene tree)
Gene ID: 100923356
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 10245 bases
Position: chrGL857000.1:4150234-4160478
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000022212	U3_assoc_6	PF08640.11	1.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000022389	-	909	-	ENSSHAP00000022212	303 (aa)	-	G3X3F7

Gene Model

Click here to download ENSSHAG00000018792's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018792	-	96	62.116	ENSATEG00000003401	utp6	51	62.116	Anabas_testudineus
ENSSHAG00000018792	-	96	71.233	ENSANAG00000034603	UTP6	59	71.233	Aotus_nancymaae
ENSSHAG00000018792	-	96	65.529	ENSBTAG00000015612	UTP6	54	65.529	Bos_taurus
ENSSHAG00000018792	-	96	71.233	ENSCAPG00000017595	UTP6	57	71.233	Cavia_aperea
ENSSHAG00000018792	-	77	40.426	ENSCSAVG00000011416	-	72	40.426	Ciona_savignyi
ENSSHAG00000018792	-	96	72.945	ENSCGRG00000011543	Utp6	52	72.945	Cricetulus_griseus_crigri
ENSSHAG00000018792	-	99	55.960	ENSCSEG00000013422	utp6	50	55.960	Cynoglossus_semilaevis
ENSSHAG00000018792	-	96	61.301	ENSDARG00000098433	utp6	83	67.550	Danio_rerio
ENSSHAG00000018792	-	99	70.569	ENSDORG00000003843	Utp6	54	71.918	Dipodomys_ordii
ENSSHAG00000018792	-	96	65.753	ENSHGLG00100006047	-	50	65.753	Heterocephalus_glaber_male
ENSSHAG00000018792	-	98	69.667	ENSLACG00000017158	UTP6	50	69.667	Latimeria_chalumnae
ENSSHAG00000018792	-	96	66.553	ENSMLEG00000032174	UTP6	53	66.553	Mandrillus_leucophaeus
ENSSHAG00000018792	-	98	61.130	ENSMAMG00000002228	utp6	50	61.130	Mastacembelus_armatus
ENSSHAG00000018792	-	96	71.575	ENSMGAG00000008111	UTP6	51	71.575	Meleagris_gallopavo
ENSSHAG00000018792	-	96	62.799	ENSMALG00000021112	utp6	51	62.799	Monopterus_albus
ENSSHAG00000018792	-	96	72.109	MGP_PahariEiJ_G0017965	Utp6	55	72.109	Mus_pahari
ENSSHAG00000018792	-	68	67.633	ENSODEG00000011971	UTP6	51	67.633	Octodon_degus
ENSSHAG00000018792	-	99	72.185	ENSOANG00000004279	UTP6	51	72.185	Ornithorhynchus_anatinus
ENSSHAG00000018792	-	98	60.133	ENSORLG00020010377	utp6	50	60.133	Oryzias_latipes_hni
ENSSHAG00000018792	-	98	59.468	ENSORLG00015008893	utp6	50	59.468	Oryzias_latipes_hsok
ENSSHAG00000018792	-	98	60.133	ENSOMEG00000017487	utp6	50	60.133	Oryzias_melastigma
ENSSHAG00000018792	-	96	58.503	ENSOGAG00000004511	UTP6	56	58.503	Otolemur_garnettii
ENSSHAG00000018792	-	96	58.621	ENSPPAG00000016895	-	50	58.621	Pan_paniscus
ENSSHAG00000018792	-	96	58.621	ENSPTRG00000044798	-	50	58.621	Pan_troglodytes
ENSSHAG00000018792	-	96	62.671	ENSPKIG00000004653	utp6	52	62.671	Paramormyrops_kingsleyae
ENSSHAG00000018792	-	92	50.519	ENSPMAG00000009561	utp6	51	50.519	Petromyzon_marinus
ENSSHAG00000018792	-	96	70.307	ENSRBIG00000020822	UTP6	51	66.553	Rhinopithecus_bieti
ENSSHAG00000018792	-	96	70.307	ENSRROG00000036838	UTP6	51	70.307	Rhinopithecus_roxellana
ENSSHAG00000018792	-	98	60.133	ENSSDUG00000000329	utp6	50	60.133	Seriola_dumerili
ENSSHAG00000018792	-	98	60.797	ENSSLDG00000016724	utp6	50	60.797	Seriola_lalandi_dorsalis
ENSSHAG00000018792	-	98	58.472	ENSSPAG00000011871	utp6	55	58.472	Stegastes_partitus
ENSSHAG00000018792	-	99	70.957	ENSSSCG00000017745	UTP6	54	72.449	Sus_scrofa
ENSSHAG00000018792	-	98	59.136	ENSTRUG00000012005	utp6	50	59.136	Takifugu_rubripes
ENSSHAG00000018792	-	99	54.125	ENSXETG00000020057	utp6	51	53.135	Xenopus_tropicalis
ENSSHAG00000018792	-	96	61.695	ENSXMAG00000017414	utp6	52	56.656	Xiphophorus_maculatus