EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSHAG00000018861 (Gene tree)
Gene ID: 100914629
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 16824 bases
Position: chrGL841593.1:4388042-4404865
Accession: 100914629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000022287	PolyA_pol	PF01743.20	4.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000022465	TRNT1-201	1869	-	ENSSHAP00000022287	434 (aa)	XP_012399040	G3X3N2

Gene Model

Click here to download ENSSHAG00000018861's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018861	TRNT1	100	83.410	ENSG00000072756	TRNT1	100	83.410	Homo_sapiens
ENSSHAG00000018861	TRNT1	93	66.420	ENSAPOG00000013687	trnt1	95	66.420	Acanthochromis_polyacanthus
ENSSHAG00000018861	TRNT1	100	82.798	ENSAMEG00000014520	TRNT1	100	82.798	Ailuropoda_melanoleuca
ENSSHAG00000018861	TRNT1	97	66.033	ENSACIG00000021706	trnt1	99	66.033	Amphilophus_citrinellus
ENSSHAG00000018861	TRNT1	94	66.749	ENSAOCG00000024612	trnt1	95	66.749	Amphiprion_ocellaris
ENSSHAG00000018861	TRNT1	92	59.045	ENSAPEG00000022627	trnt1	92	59.045	Amphiprion_percula
ENSSHAG00000018861	TRNT1	93	68.983	ENSATEG00000008928	trnt1	99	68.983	Anabas_testudineus
ENSSHAG00000018861	TRNT1	89	76.744	ENSAPLG00000004258	TRNT1	96	76.744	Anas_platyrhynchos
ENSSHAG00000018861	TRNT1	99	73.318	ENSACAG00000005657	TRNT1	98	73.318	Anolis_carolinensis
ENSSHAG00000018861	TRNT1	100	84.101	ENSANAG00000024802	TRNT1	100	84.101	Aotus_nancymaae
ENSSHAG00000018861	TRNT1	95	66.667	ENSACLG00000022227	trnt1	96	66.667	Astatotilapia_calliptera
ENSSHAG00000018861	TRNT1	97	67.303	ENSAMXG00000003960	trnt1	97	67.143	Astyanax_mexicanus
ENSSHAG00000018861	TRNT1	100	82.488	ENSBTAG00000019534	TRNT1	100	82.488	Bos_taurus
ENSSHAG00000018861	TRNT1	94	42.755	WBGene00010089	hpo-31	94	42.755	Caenorhabditis_elegans
ENSSHAG00000018861	TRNT1	100	84.332	ENSCJAG00000015466	TRNT1	100	84.332	Callithrix_jacchus
ENSSHAG00000018861	TRNT1	100	82.488	ENSCAFG00000005985	TRNT1	99	82.488	Canis_familiaris
ENSSHAG00000018861	TRNT1	100	82.488	ENSCAFG00020014746	TRNT1	99	82.488	Canis_lupus_dingo
ENSSHAG00000018861	TRNT1	100	82.719	ENSCHIG00000007030	TRNT1	99	82.719	Capra_hircus
ENSSHAG00000018861	TRNT1	100	84.793	ENSTSYG00000013390	TRNT1	100	84.793	Carlito_syrichta
ENSSHAG00000018861	TRNT1	87	69.415	ENSCAPG00000006891	TRNT1	99	69.415	Cavia_aperea
ENSSHAG00000018861	TRNT1	99	83.834	ENSCPOG00000007849	TRNT1	99	83.834	Cavia_porcellus
ENSSHAG00000018861	TRNT1	95	82.692	ENSCCAG00000002919	TRNT1	100	84.539	Cebus_capucinus
ENSSHAG00000018861	TRNT1	99	84.527	ENSCATG00000031985	TRNT1	99	84.527	Cercocebus_atys
ENSSHAG00000018861	TRNT1	99	83.603	ENSCLAG00000005186	TRNT1	99	83.603	Chinchilla_lanigera
ENSSHAG00000018861	TRNT1	100	85.023	ENSCSAG00000011052	TRNT1	100	85.023	Chlorocebus_sabaeus
ENSSHAG00000018861	TRNT1	85	84.653	ENSCHOG00000005712	TRNT1	85	84.653	Choloepus_hoffmanni
ENSSHAG00000018861	TRNT1	94	81.618	ENSCPBG00000017636	TRNT1	93	81.618	Chrysemys_picta_bellii
ENSSHAG00000018861	TRNT1	93	44.526	ENSCING00000007069	-	99	44.526	Ciona_intestinalis
ENSSHAG00000018861	TRNT1	97	45.047	ENSCSAVG00000007494	-	99	45.047	Ciona_savignyi
ENSSHAG00000018861	TRNT1	100	84.793	ENSCANG00000039030	TRNT1	100	84.793	Colobus_angolensis_palliatus
ENSSHAG00000018861	TRNT1	100	82.949	ENSCGRG00001009998	Trnt1	100	82.949	Cricetulus_griseus_chok1gshd
ENSSHAG00000018861	TRNT1	100	82.949	ENSCGRG00000013410	Trnt1	100	82.949	Cricetulus_griseus_crigri
ENSSHAG00000018861	TRNT1	97	66.110	ENSCSEG00000008157	trnt1	96	66.110	Cynoglossus_semilaevis
ENSSHAG00000018861	TRNT1	94	67.488	ENSCVAG00000019770	trnt1	96	67.488	Cyprinodon_variegatus
ENSSHAG00000018861	TRNT1	97	68.333	ENSDARG00000075297	trnt1	97	68.333	Danio_rerio
ENSSHAG00000018861	TRNT1	99	82.448	ENSDNOG00000008837	TRNT1	99	82.448	Dasypus_novemcinctus
ENSSHAG00000018861	TRNT1	100	82.258	ENSDORG00000014035	Trnt1	100	82.258	Dipodomys_ordii
ENSSHAG00000018861	TRNT1	92	49.383	FBgn0037369	CG2100	83	49.383	Drosophila_melanogaster
ENSSHAG00000018861	TRNT1	57	83.065	ENSETEG00000018177	TRNT1	99	83.065	Echinops_telfairi
ENSSHAG00000018861	TRNT1	93	62.716	ENSEBUG00000012779	-	95	62.716	Eptatretus_burgeri
ENSSHAG00000018861	TRNT1	100	84.562	ENSEASG00005003577	TRNT1	100	84.562	Equus_asinus_asinus
ENSSHAG00000018861	TRNT1	100	84.793	ENSECAG00000014420	TRNT1	100	84.793	Equus_caballus
ENSSHAG00000018861	TRNT1	100	82.488	ENSEEUG00000009567	TRNT1	100	82.488	Erinaceus_europaeus
ENSSHAG00000018861	TRNT1	94	68.873	ENSELUG00000003802	trnt1	95	68.873	Esox_lucius
ENSSHAG00000018861	TRNT1	100	82.028	ENSFCAG00000026805	TRNT1	99	82.028	Felis_catus
ENSSHAG00000018861	TRNT1	88	77.344	ENSFALG00000013539	TRNT1	99	77.344	Ficedula_albicollis
ENSSHAG00000018861	TRNT1	99	83.141	ENSFDAG00000018412	TRNT1	99	83.141	Fukomys_damarensis
ENSSHAG00000018861	TRNT1	94	66.995	ENSFHEG00000019294	trnt1	96	66.995	Fundulus_heteroclitus
ENSSHAG00000018861	TRNT1	96	65.301	ENSGMOG00000007460	trnt1	97	65.301	Gadus_morhua
ENSSHAG00000018861	TRNT1	94	74.384	ENSGALG00000017368	TRNT1	94	74.384	Gallus_gallus
ENSSHAG00000018861	TRNT1	94	68.473	ENSGAFG00000008647	trnt1	96	68.473	Gambusia_affinis
ENSSHAG00000018861	TRNT1	95	65.700	ENSGACG00000011903	trnt1	97	66.495	Gasterosteus_aculeatus
ENSSHAG00000018861	TRNT1	94	81.463	ENSGAGG00000020942	TRNT1	93	81.463	Gopherus_agassizii
ENSSHAG00000018861	TRNT1	100	83.641	ENSGGOG00000015286	TRNT1	100	83.641	Gorilla_gorilla
ENSSHAG00000018861	TRNT1	95	66.667	ENSHBUG00000002797	trnt1	96	66.667	Haplochromis_burtoni
ENSSHAG00000018861	TRNT1	99	77.650	ENSHGLG00000000221	-	99	77.650	Heterocephalus_glaber_female
ENSSHAG00000018861	TRNT1	99	83.141	ENSHGLG00000003649	TRNT1	99	83.141	Heterocephalus_glaber_female
ENSSHAG00000018861	TRNT1	99	82.217	ENSHGLG00100016421	TRNT1	99	82.217	Heterocephalus_glaber_male
ENSSHAG00000018861	TRNT1	94	66.995	ENSHCOG00000010618	trnt1	95	66.995	Hippocampus_comes
ENSSHAG00000018861	TRNT1	94	68.537	ENSIPUG00000000971	trnt1	95	68.537	Ictalurus_punctatus
ENSSHAG00000018861	TRNT1	100	80.645	ENSSTOG00000000150	TRNT1	98	85.149	Ictidomys_tridecemlineatus
ENSSHAG00000018861	TRNT1	100	83.871	ENSJJAG00000018561	Trnt1	99	83.871	Jaculus_jaculus
ENSSHAG00000018861	TRNT1	94	67.488	ENSKMAG00000011307	trnt1	95	67.488	Kryptolebias_marmoratus
ENSSHAG00000018861	TRNT1	90	62.916	ENSLBEG00000019457	trnt1	92	62.916	Labrus_bergylta
ENSSHAG00000018861	TRNT1	95	74.939	ENSLACG00000013227	TRNT1	95	74.939	Latimeria_chalumnae
ENSSHAG00000018861	TRNT1	94	70.762	ENSLOCG00000011105	trnt1	93	70.762	Lepisosteus_oculatus
ENSSHAG00000018861	TRNT1	99	83.372	ENSLAFG00000023191	TRNT1	99	83.372	Loxodonta_africana
ENSSHAG00000018861	TRNT1	99	84.758	ENSMFAG00000045113	TRNT1	99	84.758	Macaca_fascicularis
ENSSHAG00000018861	TRNT1	99	84.758	ENSMMUG00000017983	TRNT1	99	84.758	Macaca_mulatta
ENSSHAG00000018861	TRNT1	99	84.758	ENSMNEG00000037805	TRNT1	99	84.758	Macaca_nemestrina
ENSSHAG00000018861	TRNT1	88	86.911	ENSMLEG00000033671	TRNT1	99	86.911	Mandrillus_leucophaeus
ENSSHAG00000018861	TRNT1	96	66.506	ENSMAMG00000023401	trnt1	97	66.506	Mastacembelus_armatus
ENSSHAG00000018861	TRNT1	95	66.667	ENSMZEG00005009141	trnt1	96	66.667	Maylandia_zebra
ENSSHAG00000018861	TRNT1	74	75.701	ENSMGAG00000009971	TRNT1	100	75.701	Meleagris_gallopavo
ENSSHAG00000018861	TRNT1	100	82.488	ENSMAUG00000020707	Trnt1	100	82.488	Mesocricetus_auratus
ENSSHAG00000018861	TRNT1	99	83.603	ENSMICG00000016615	TRNT1	99	83.603	Microcebus_murinus
ENSSHAG00000018861	TRNT1	100	83.410	ENSMOCG00000004539	Trnt1	100	83.410	Microtus_ochrogaster
ENSSHAG00000018861	TRNT1	94	67.734	ENSMMOG00000010742	trnt1	96	67.734	Mola_mola
ENSSHAG00000018861	TRNT1	100	93.779	ENSMODG00000004368	TRNT1	100	93.779	Monodelphis_domestica
ENSSHAG00000018861	TRNT1	97	66.826	ENSMALG00000008376	trnt1	96	66.826	Monopterus_albus
ENSSHAG00000018861	TRNT1	99	83.488	MGP_CAROLIEiJ_G0028698	Trnt1	99	83.488	Mus_caroli
ENSSHAG00000018861	TRNT1	99	83.488	ENSMUSG00000013736	Trnt1	99	83.488	Mus_musculus
ENSSHAG00000018861	TRNT1	99	82.791	MGP_PahariEiJ_G0022449	Trnt1	99	82.791	Mus_pahari
ENSSHAG00000018861	TRNT1	99	83.721	MGP_SPRETEiJ_G0029726	Trnt1	99	83.721	Mus_spretus
ENSSHAG00000018861	TRNT1	100	82.488	ENSMPUG00000017017	TRNT1	99	82.488	Mustela_putorius_furo
ENSSHAG00000018861	TRNT1	89	81.088	ENSMLUG00000011864	TRNT1	100	81.088	Myotis_lucifugus
ENSSHAG00000018861	TRNT1	100	82.719	ENSNGAG00000000537	Trnt1	100	82.719	Nannospalax_galili
ENSSHAG00000018861	TRNT1	76	65.559	ENSNBRG00000023606	trnt1	95	65.559	Neolamprologus_brichardi
ENSSHAG00000018861	TRNT1	100	84.332	ENSNLEG00000003226	TRNT1	100	84.332	Nomascus_leucogenys
ENSSHAG00000018861	TRNT1	100	91.935	ENSMEUG00000004684	TRNT1	100	91.935	Notamacropus_eugenii
ENSSHAG00000018861	TRNT1	88	74.413	ENSOPRG00000015067	TRNT1	99	74.413	Ochotona_princeps
ENSSHAG00000018861	TRNT1	99	81.986	ENSODEG00000007597	TRNT1	99	81.986	Octodon_degus
ENSSHAG00000018861	TRNT1	95	66.667	ENSONIG00000020273	trnt1	95	66.667	Oreochromis_niloticus
ENSSHAG00000018861	TRNT1	99	76.157	ENSOANG00000007514	TRNT1	99	76.157	Ornithorhynchus_anatinus
ENSSHAG00000018861	TRNT1	100	78.802	ENSOCUG00000008580	TRNT1	99	78.802	Oryctolagus_cuniculus
ENSSHAG00000018861	TRNT1	94	66.502	ENSORLG00000003165	trnt1	96	66.502	Oryzias_latipes
ENSSHAG00000018861	TRNT1	94	66.749	ENSORLG00020022060	trnt1	96	66.749	Oryzias_latipes_hni
ENSSHAG00000018861	TRNT1	94	66.010	ENSORLG00015018915	trnt1	95	66.010	Oryzias_latipes_hsok
ENSSHAG00000018861	TRNT1	94	65.025	ENSOMEG00000003331	trnt1	96	65.025	Oryzias_melastigma
ENSSHAG00000018861	TRNT1	100	82.488	ENSOARG00000008631	TRNT1	99	82.488	Ovis_aries
ENSSHAG00000018861	TRNT1	100	83.641	ENSPPAG00000043566	TRNT1	100	83.641	Pan_paniscus
ENSSHAG00000018861	TRNT1	99	82.448	ENSPPRG00000001327	TRNT1	99	82.448	Panthera_pardus
ENSSHAG00000018861	TRNT1	100	82.028	ENSPTIG00000011448	TRNT1	99	82.028	Panthera_tigris_altaica
ENSSHAG00000018861	TRNT1	100	83.641	ENSPTRG00000014564	TRNT1	100	83.641	Pan_troglodytes
ENSSHAG00000018861	TRNT1	99	84.527	ENSPANG00000025944	TRNT1	99	84.527	Papio_anubis
ENSSHAG00000018861	TRNT1	97	68.483	ENSPKIG00000020015	trnt1	98	68.483	Paramormyrops_kingsleyae
ENSSHAG00000018861	TRNT1	91	80.605	ENSPSIG00000017356	TRNT1	99	82.173	Pelodiscus_sinensis
ENSSHAG00000018861	TRNT1	95	67.070	ENSPMGG00000008888	trnt1	95	67.070	Periophthalmus_magnuspinnatus
ENSSHAG00000018861	TRNT1	100	82.949	ENSPEMG00000019845	Trnt1	100	82.949	Peromyscus_maniculatus_bairdii
ENSSHAG00000018861	TRNT1	100	94.240	ENSPCIG00000030436	TRNT1	100	94.240	Phascolarctos_cinereus
ENSSHAG00000018861	TRNT1	94	68.227	ENSPFOG00000006194	trnt1	95	68.227	Poecilia_formosa
ENSSHAG00000018861	TRNT1	94	68.227	ENSPLAG00000015623	trnt1	99	67.990	Poecilia_latipinna
ENSSHAG00000018861	TRNT1	94	68.227	ENSPMEG00000012216	trnt1	99	67.990	Poecilia_mexicana
ENSSHAG00000018861	TRNT1	94	67.561	ENSPREG00000021470	trnt1	96	67.561	Poecilia_reticulata
ENSSHAG00000018861	TRNT1	100	84.332	ENSPPYG00000013702	TRNT1	100	84.332	Pongo_abelii
ENSSHAG00000018861	TRNT1	88	84.073	ENSPCAG00000001951	TRNT1	100	84.073	Procavia_capensis
ENSSHAG00000018861	TRNT1	99	84.758	ENSPCOG00000022228	TRNT1	99	84.758	Propithecus_coquereli
ENSSHAG00000018861	TRNT1	88	83.594	ENSPVAG00000008784	TRNT1	100	83.594	Pteropus_vampyrus
ENSSHAG00000018861	TRNT1	95	66.667	ENSPNYG00000003120	trnt1	96	66.667	Pundamilia_nyererei
ENSSHAG00000018861	TRNT1	94	68.780	ENSPNAG00000000565	trnt1	95	68.780	Pygocentrus_nattereri
ENSSHAG00000018861	TRNT1	99	83.721	ENSRNOG00000006432	Trnt1	99	83.721	Rattus_norvegicus
ENSSHAG00000018861	TRNT1	100	82.949	ENSRBIG00000042632	TRNT1	100	82.949	Rhinopithecus_bieti
ENSSHAG00000018861	TRNT1	100	84.332	ENSRROG00000036866	TRNT1	100	84.332	Rhinopithecus_roxellana
ENSSHAG00000018861	TRNT1	100	84.101	ENSSBOG00000021208	TRNT1	100	84.101	Saimiri_boliviensis_boliviensis
ENSSHAG00000018861	TRNT1	93	69.877	ENSSFOG00015020844	trnt1	94	69.877	Scleropages_formosus
ENSSHAG00000018861	TRNT1	95	66.910	ENSSMAG00000015432	trnt1	94	66.910	Scophthalmus_maximus
ENSSHAG00000018861	TRNT1	94	66.995	ENSSDUG00000012320	trnt1	95	66.995	Seriola_dumerili
ENSSHAG00000018861	TRNT1	94	66.995	ENSSLDG00000009325	trnt1	95	66.995	Seriola_lalandi_dorsalis
ENSSHAG00000018861	TRNT1	57	62.097	ENSSLDG00000016463	-	91	62.762	Seriola_lalandi_dorsalis
ENSSHAG00000018861	TRNT1	88	81.250	ENSSPUG00000014153	TRNT1	100	81.250	Sphenodon_punctatus
ENSSHAG00000018861	TRNT1	94	66.502	ENSSPAG00000021005	trnt1	95	66.502	Stegastes_partitus
ENSSHAG00000018861	TRNT1	100	83.410	ENSSSCG00000011529	TRNT1	100	83.410	Sus_scrofa
ENSSHAG00000018861	TRNT1	93	75.309	ENSTGUG00000010192	TRNT1	99	75.309	Taeniopygia_guttata
ENSSHAG00000018861	TRNT1	94	68.227	ENSTRUG00000001088	trnt1	95	68.227	Takifugu_rubripes
ENSSHAG00000018861	TRNT1	94	67.241	ENSTNIG00000007363	trnt1	94	67.241	Tetraodon_nigroviridis
ENSSHAG00000018861	TRNT1	75	65.172	ENSTBEG00000006367	TRNT1	100	65.172	Tupaia_belangeri
ENSSHAG00000018861	TRNT1	100	83.180	ENSTTRG00000007803	TRNT1	100	83.180	Tursiops_truncatus
ENSSHAG00000018861	TRNT1	100	82.719	ENSUAMG00000022574	TRNT1	99	82.719	Ursus_americanus
ENSSHAG00000018861	TRNT1	100	83.180	ENSUMAG00000024092	TRNT1	99	83.180	Ursus_maritimus
ENSSHAG00000018861	TRNT1	100	82.488	ENSVVUG00000012810	TRNT1	99	82.488	Vulpes_vulpes
ENSSHAG00000018861	TRNT1	95	64.904	ENSXETG00000025091	trnt1	99	66.169	Xenopus_tropicalis
ENSSHAG00000018861	TRNT1	94	67.980	ENSXCOG00000010150	trnt1	96	67.980	Xiphophorus_couchianus
ENSSHAG00000018861	TRNT1	94	67.488	ENSXMAG00000002227	trnt1	96	67.488	Xiphophorus_maculatus