EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000018881 (Gene tree)
Gene ID: 100920906
Gene Symbol: SYNJ2
Alias: INPP5H
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Plus strand
Length: 104181 bases
Position: chrGL856966.1:4470621-4574801
Accession: 11504
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000022309	Exo_endo_phos	PF03372.23	1.1e-12	1	1
ENSSHAP00000022308	Exo_endo_phos	PF03372.23	1.7e-12	1	1
ENSSHAP00000022309	DUF1866	PF08952.11	4e-60	1	1
ENSSHAP00000022308	DUF1866	PF08952.11	4.8e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000022486	SYNJ2-201	4407	-	ENSSHAP00000022308	1468 (aa)	-	G3X3Q3
ENSSHAT00000022487	SYNJ2-202	3381	-	ENSSHAP00000022309	1126 (aa)	-	G3X3Q4

Gene Model

Click here to download ENSSHAG00000018881's gene model file

Pathways

Pathway ID	Pathway Name	Source
shr00562	Inositol phosphate metabolism	KEGG
shr01100	Metabolic pathways	KEGG
shr04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000018881	SYNJ2	68	55.812	ENSSHAG00000008538	SYNJ1	66	54.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018881	SYNJ2	100	80.855	ENSG00000078269	SYNJ2	94	86.831	Homo_sapiens
ENSSHAG00000018881	SYNJ2	99	77.747	ENSAMEG00000009581	SYNJ2	100	77.747	Ailuropoda_melanoleuca
ENSSHAG00000018881	SYNJ2	99	73.072	ENSAPLG00000002563	SYNJ2	98	72.727	Anas_platyrhynchos
ENSSHAG00000018881	SYNJ2	99	68.750	ENSACAG00000004945	SYNJ2	96	69.450	Anolis_carolinensis
ENSSHAG00000018881	SYNJ2	100	80.312	ENSANAG00000026575	SYNJ2	94	86.656	Aotus_nancymaae
ENSSHAG00000018881	SYNJ2	100	78.078	ENSBTAG00000000817	SYNJ2	98	78.011	Bos_taurus
ENSSHAG00000018881	SYNJ2	100	80.652	ENSCJAG00000003570	SYNJ2	94	86.985	Callithrix_jacchus
ENSSHAG00000018881	SYNJ2	99	79.618	ENSCAFG00000000644	SYNJ2	100	79.674	Canis_familiaris
ENSSHAG00000018881	SYNJ2	100	78.812	ENSCAFG00020015809	SYNJ2	99	79.381	Canis_lupus_dingo
ENSSHAG00000018881	SYNJ2	100	77.448	ENSCHIG00000011077	SYNJ2	98	77.448	Capra_hircus
ENSSHAG00000018881	SYNJ2	99	81.310	ENSTSYG00000014342	SYNJ2	94	87.894	Carlito_syrichta
ENSSHAG00000018881	SYNJ2	99	76.818	ENSCAPG00000000287	SYNJ2	96	83.448	Cavia_aperea
ENSSHAG00000018881	SYNJ2	100	79.525	ENSCPOG00000009144	SYNJ2	95	90.426	Cavia_porcellus
ENSSHAG00000018881	SYNJ2	100	80.516	ENSCCAG00000025484	SYNJ2	94	86.738	Cebus_capucinus
ENSSHAG00000018881	SYNJ2	100	81.140	ENSCATG00000042943	SYNJ2	94	87.160	Cercocebus_atys
ENSSHAG00000018881	SYNJ2	100	80.027	ENSCLAG00000004730	SYNJ2	90	90.851	Chinchilla_lanigera
ENSSHAG00000018881	SYNJ2	100	81.072	ENSCSAG00000013130	SYNJ2	98	81.140	Chlorocebus_sabaeus
ENSSHAG00000018881	SYNJ2	99	74.780	ENSCPBG00000016273	SYNJ2	96	74.847	Chrysemys_picta_bellii
ENSSHAG00000018881	SYNJ2	99	80.978	ENSCANG00000040349	SYNJ2	97	87.046	Colobus_angolensis_palliatus
ENSSHAG00000018881	SYNJ2	99	78.990	ENSCGRG00001004257	Synj2	95	88.288	Cricetulus_griseus_chok1gshd
ENSSHAG00000018881	SYNJ2	99	79.258	ENSCGRG00000001656	Synj2	95	88.288	Cricetulus_griseus_crigri
ENSSHAG00000018881	SYNJ2	99	70.765	ENSDNOG00000015900	SYNJ2	96	82.622	Dasypus_novemcinctus
ENSSHAG00000018881	SYNJ2	99	76.907	ENSDORG00000014128	Synj2	98	76.678	Dipodomys_ordii
ENSSHAG00000018881	SYNJ2	82	90.942	ENSETEG00000017418	SYNJ2	81	90.943	Echinops_telfairi
ENSSHAG00000018881	SYNJ2	100	79.946	ENSEASG00005018902	SYNJ2	98	80.542	Equus_asinus_asinus
ENSSHAG00000018881	SYNJ2	100	79.635	ENSECAG00000012646	SYNJ2	91	80.407	Equus_caballus
ENSSHAG00000018881	SYNJ2	63	78.947	ENSEEUG00000015796	-	58	78.947	Erinaceus_europaeus
ENSSHAG00000018881	SYNJ2	100	78.804	ENSFCAG00000010854	SYNJ2	94	85.997	Felis_catus
ENSSHAG00000018881	SYNJ2	98	71.233	ENSFALG00000012593	SYNJ2	99	71.684	Ficedula_albicollis
ENSSHAG00000018881	SYNJ2	99	78.034	ENSFDAG00000016352	SYNJ2	96	86.873	Fukomys_damarensis
ENSSHAG00000018881	SYNJ2	99	73.041	ENSGALG00000013727	SYNJ2	97	72.740	Gallus_gallus
ENSSHAG00000018881	SYNJ2	99	73.763	ENSGAGG00000009857	SYNJ2	96	74.237	Gopherus_agassizii
ENSSHAG00000018881	SYNJ2	100	80.788	ENSGGOG00000012210	SYNJ2	94	86.914	Gorilla_gorilla
ENSSHAG00000018881	SYNJ2	100	79.362	ENSHGLG00000007534	SYNJ2	93	87.259	Heterocephalus_glaber_female
ENSSHAG00000018881	SYNJ2	99	79.235	ENSHGLG00100009973	SYNJ2	96	86.332	Heterocephalus_glaber_male
ENSSHAG00000018881	SYNJ2	99	79.645	ENSSTOG00000016474	SYNJ2	99	79.645	Ictidomys_tridecemlineatus
ENSSHAG00000018881	SYNJ2	99	77.990	ENSJJAG00000014436	Synj2	98	81.382	Jaculus_jaculus
ENSSHAG00000018881	SYNJ2	72	70.693	ENSLACG00000007316	SYNJ2	99	71.201	Latimeria_chalumnae
ENSSHAG00000018881	SYNJ2	99	79.593	ENSLAFG00000011979	SYNJ2	100	79.864	Loxodonta_africana
ENSSHAG00000018881	SYNJ2	91	91.864	ENSMFAG00000040552	SYNJ2	98	89.233	Macaca_fascicularis
ENSSHAG00000018881	SYNJ2	77	82.898	ENSMMUG00000007153	SYNJ2	96	88.206	Macaca_mulatta
ENSSHAG00000018881	SYNJ2	100	81.208	ENSMNEG00000017211	SYNJ2	94	87.160	Macaca_nemestrina
ENSSHAG00000018881	SYNJ2	100	77.951	ENSMLEG00000024911	SYNJ2	98	78.087	Mandrillus_leucophaeus
ENSSHAG00000018881	SYNJ2	90	76.549	ENSMGAG00000012839	SYNJ2	98	77.032	Meleagris_gallopavo
ENSSHAG00000018881	SYNJ2	99	78.110	ENSMAUG00000022212	Synj2	95	88.160	Mesocricetus_auratus
ENSSHAG00000018881	SYNJ2	100	78.765	ENSMICG00000015804	SYNJ2	94	84.926	Microcebus_murinus
ENSSHAG00000018881	SYNJ2	99	78.484	ENSMOCG00000020054	Synj2	97	86.658	Microtus_ochrogaster
ENSSHAG00000018881	SYNJ2	100	92.779	ENSMODG00000007783	SYNJ2	98	92.779	Monodelphis_domestica
ENSSHAG00000018881	SYNJ2	99	77.831	MGP_CAROLIEiJ_G0021026	Synj2	100	90.455	Mus_caroli
ENSSHAG00000018881	SYNJ2	99	77.763	ENSMUSG00000023805	Synj2	100	90.455	Mus_musculus
ENSSHAG00000018881	SYNJ2	99	78.035	MGP_PahariEiJ_G0023344	Synj2	100	90.455	Mus_pahari
ENSSHAG00000018881	SYNJ2	99	77.285	MGP_SPRETEiJ_G0021931	Synj2	100	90.152	Mus_spretus
ENSSHAG00000018881	SYNJ2	86	82.362	ENSMPUG00000005323	SYNJ2	95	82.362	Mustela_putorius_furo
ENSSHAG00000018881	SYNJ2	97	77.374	ENSMLUG00000000324	SYNJ2	100	77.584	Myotis_lucifugus
ENSSHAG00000018881	SYNJ2	99	80.191	ENSNGAG00000014859	Synj2	96	88.481	Nannospalax_galili
ENSSHAG00000018881	SYNJ2	99	79.130	ENSNLEG00000010750	SYNJ2	94	85.161	Nomascus_leucogenys
ENSSHAG00000018881	SYNJ2	93	93.511	ENSMEUG00000003493	SYNJ2	95	91.379	Notamacropus_eugenii
ENSSHAG00000018881	SYNJ2	91	84.733	ENSOPRG00000009648	SYNJ2	91	77.588	Ochotona_princeps
ENSSHAG00000018881	SYNJ2	100	79.529	ENSODEG00000007709	SYNJ2	94	91.489	Octodon_degus
ENSSHAG00000018881	SYNJ2	54	57.855	ENSOANG00000029828	-	99	64.199	Ornithorhynchus_anatinus
ENSSHAG00000018881	SYNJ2	99	77.322	ENSOCUG00000004762	SYNJ2	100	77.527	Oryctolagus_cuniculus
ENSSHAG00000018881	SYNJ2	78	86.024	ENSOGAG00000000488	SYNJ2	99	87.153	Otolemur_garnettii
ENSSHAG00000018881	SYNJ2	99	77.529	ENSOARG00000004304	SYNJ2	100	77.597	Ovis_aries
ENSSHAG00000018881	SYNJ2	100	80.962	ENSPPAG00000028831	SYNJ2	98	80.759	Pan_paniscus
ENSSHAG00000018881	SYNJ2	100	78.668	ENSPPRG00000009068	SYNJ2	94	85.750	Panthera_pardus
ENSSHAG00000018881	SYNJ2	99	78.606	ENSPTIG00000018780	SYNJ2	94	85.975	Panthera_tigris_altaica
ENSSHAG00000018881	SYNJ2	100	81.263	ENSPTRG00000018739	SYNJ2	97	87.028	Pan_troglodytes
ENSSHAG00000018881	SYNJ2	100	81.140	ENSPANG00000010755	SYNJ2	94	87.243	Papio_anubis
ENSSHAG00000018881	SYNJ2	98	73.829	ENSPSIG00000014659	SYNJ2	98	73.829	Pelodiscus_sinensis
ENSSHAG00000018881	SYNJ2	99	78.990	ENSPEMG00000006247	Synj2	91	91.064	Peromyscus_maniculatus_bairdii
ENSSHAG00000018881	SYNJ2	100	92.984	ENSPCIG00000010179	SYNJ2	100	93.164	Phascolarctos_cinereus
ENSSHAG00000018881	SYNJ2	100	80.923	ENSPPYG00000017130	SYNJ2	98	81.263	Pongo_abelii
ENSSHAG00000018881	SYNJ2	87	91.935	ENSPCAG00000009217	SYNJ2	90	74.007	Procavia_capensis
ENSSHAG00000018881	SYNJ2	100	80.095	ENSPCOG00000026910	SYNJ2	94	86.820	Propithecus_coquereli
ENSSHAG00000018881	SYNJ2	100	76.735	ENSPVAG00000006131	SYNJ2	98	76.054	Pteropus_vampyrus
ENSSHAG00000018881	SYNJ2	99	76.364	ENSRNOG00000017114	Synj2	97	81.506	Rattus_norvegicus
ENSSHAG00000018881	SYNJ2	100	79.104	ENSRBIG00000044126	SYNJ2	98	79.172	Rhinopithecus_bieti
ENSSHAG00000018881	SYNJ2	100	80.936	ENSRROG00000027755	SYNJ2	94	86.996	Rhinopithecus_roxellana
ENSSHAG00000018881	SYNJ2	100	80.177	ENSSBOG00000034876	SYNJ2	94	86.656	Saimiri_boliviensis_boliviensis
ENSSHAG00000018881	SYNJ2	99	71.871	ENSSPUG00000000491	SYNJ2	97	73.752	Sphenodon_punctatus
ENSSHAG00000018881	SYNJ2	86	84.057	ENSSSCG00000012315	SYNJ2	94	85.667	Sus_scrofa
ENSSHAG00000018881	SYNJ2	89	75.991	ENSTGUG00000011082	SYNJ2	99	76.365	Taeniopygia_guttata
ENSSHAG00000018881	SYNJ2	80	82.222	ENSTBEG00000015827	SYNJ2	85	75.375	Tupaia_belangeri
ENSSHAG00000018881	SYNJ2	94	89.206	ENSTTRG00000009677	SYNJ2	98	74.457	Tursiops_truncatus
ENSSHAG00000018881	SYNJ2	67	65.293	ENSUAMG00000021958	-	98	70.787	Ursus_americanus
ENSSHAG00000018881	SYNJ2	77	85.436	ENSUMAG00000012826	SYNJ2	96	79.742	Ursus_maritimus
ENSSHAG00000018881	SYNJ2	100	67.098	ENSVVUG00000007407	SYNJ2	100	87.375	Vulpes_vulpes
ENSSHAG00000018881	SYNJ2	90	68.794	ENSXETG00000034066	synj2	85	69.031	Xenopus_tropicalis