EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSHAG00000018908 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sarcophilus_harrisii
Status: putative
Strand: Minus strand
Length: 2296 bases
Position: chrGL834651.1:4608325-4610620
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSHAP00000022340	RRM_1	PF00076.22	3.2e-18	1	2
ENSSHAP00000022340	RRM_1	PF00076.22	3.2e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSHAT00000022518	-	1353	-	ENSSHAP00000022340	451 (aa)	-	G3X3T5

Gene Model

Click here to download ENSSHAG00000018908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSHAG00000018908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSHAG00000018908	-	86	81.186	ENSSHAG00000006440	-	99	81.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSHAG00000018908	-	91	65.942	ENSG00000102241	HTATSF1	97	66.529	Homo_sapiens
ENSSHAG00000018908	-	98	56.957	ENSAPOG00000009823	htatsf1	99	56.957	Acanthochromis_polyacanthus
ENSSHAG00000018908	-	89	62.322	ENSACIG00000020459	htatsf1	98	59.477	Amphilophus_citrinellus
ENSSHAG00000018908	-	85	64.000	ENSAOCG00000020994	htatsf1	99	57.537	Amphiprion_ocellaris
ENSSHAG00000018908	-	86	63.366	ENSAPEG00000016432	htatsf1	99	58.030	Amphiprion_percula
ENSSHAG00000018908	-	85	65.000	ENSATEG00000008903	htatsf1	88	65.000	Anabas_testudineus
ENSSHAG00000018908	-	88	72.059	ENSAPLG00000012401	HTATSF1	99	72.059	Anas_platyrhynchos
ENSSHAG00000018908	-	78	69.638	ENSACAG00000009346	HTATSF1	91	69.638	Anolis_carolinensis
ENSSHAG00000018908	-	80	67.123	ENSANAG00000025458	-	52	66.027	Aotus_nancymaae
ENSSHAG00000018908	-	88	63.462	ENSACLG00000008096	htatsf1	99	59.355	Astatotilapia_calliptera
ENSSHAG00000018908	-	97	59.827	ENSAMXG00000008387	htatsf1	98	60.043	Astyanax_mexicanus
ENSSHAG00000018908	-	83	68.097	ENSBTAG00000032711	HTATSF1	50	68.097	Bos_taurus
ENSSHAG00000018908	-	73	39.701	WBGene00022025	Y65B4A.1	79	38.781	Caenorhabditis_elegans
ENSSHAG00000018908	-	90	66.423	ENSCJAG00000003676	HTATSF1	54	66.423	Callithrix_jacchus
ENSSHAG00000018908	-	78	69.122	ENSCCAG00000025329	-	60	65.450	Cebus_capucinus
ENSSHAG00000018908	-	90	66.180	ENSCCAG00000022701	-	55	66.180	Cebus_capucinus
ENSSHAG00000018908	-	91	66.425	ENSCATG00000029963	HTATSF1	54	66.425	Cercocebus_atys
ENSSHAG00000018908	-	87	69.036	ENSCLAG00000002718	HTATSF1	51	69.036	Chinchilla_lanigera
ENSSHAG00000018908	-	91	66.425	ENSCSAG00000007505	HTATSF1	54	66.425	Chlorocebus_sabaeus
ENSSHAG00000018908	-	97	71.973	ENSCPBG00000026092	HTATSF1	96	72.980	Chrysemys_picta_bellii
ENSSHAG00000018908	-	88	46.900	ENSCING00000005914	-	88	46.900	Ciona_intestinalis
ENSSHAG00000018908	-	79	47.500	ENSCSAVG00000000371	-	76	46.027	Ciona_savignyi
ENSSHAG00000018908	-	91	66.425	ENSCANG00000028495	HTATSF1	54	66.425	Colobus_angolensis_palliatus
ENSSHAG00000018908	-	88	68.170	ENSCGRG00001021602	Htatsf1	51	68.170	Cricetulus_griseus_chok1gshd
ENSSHAG00000018908	-	98	60.131	ENSCVAG00000014070	htatsf1	98	60.566	Cyprinodon_variegatus
ENSSHAG00000018908	-	97	59.471	ENSDARG00000056649	htatsf1	98	59.471	Danio_rerio
ENSSHAG00000018908	-	75	45.892	FBgn0037081	barc	62	45.404	Drosophila_melanogaster
ENSSHAG00000018908	-	86	51.807	ENSEBUG00000001534	htatsf1	82	52.029	Eptatretus_burgeri
ENSSHAG00000018908	-	97	58.747	ENSELUG00000005486	htatsf1	89	60.129	Esox_lucius
ENSSHAG00000018908	-	93	70.046	ENSFALG00000003728	HTATSF1	98	69.933	Ficedula_albicollis
ENSSHAG00000018908	-	97	60.927	ENSFHEG00000020286	htatsf1	98	61.369	Fundulus_heteroclitus
ENSSHAG00000018908	-	78	64.345	ENSGMOG00000016444	htatsf1	98	63.989	Gadus_morhua
ENSSHAG00000018908	-	90	71.734	ENSGALG00000006410	HTATSF1	98	69.799	Gallus_gallus
ENSSHAG00000018908	-	98	59.483	ENSGAFG00000003041	htatsf1	98	59.483	Gambusia_affinis
ENSSHAG00000018908	-	87	64.706	ENSGACG00000020459	htatsf1	90	64.706	Gasterosteus_aculeatus
ENSSHAG00000018908	-	91	65.942	ENSGGOG00000026072	HTATSF1	54	65.942	Gorilla_gorilla
ENSSHAG00000018908	-	88	63.462	ENSHBUG00000004392	htatsf1	99	59.355	Haplochromis_burtoni
ENSSHAG00000018908	-	87	67.684	ENSHGLG00000005328	HTATSF1	51	67.684	Heterocephalus_glaber_female
ENSSHAG00000018908	-	83	64.858	ENSHCOG00000009056	htatsf1	99	58.575	Hippocampus_comes
ENSSHAG00000018908	-	82	68.011	ENSIPUG00000017828	htatsf1	79	68.633	Ictalurus_punctatus
ENSSHAG00000018908	-	79	69.859	ENSSTOG00000012505	HTATSF1	50	70.777	Ictidomys_tridecemlineatus
ENSSHAG00000018908	-	97	60.352	ENSKMAG00000007622	htatsf1	98	60.352	Kryptolebias_marmoratus
ENSSHAG00000018908	-	97	60.440	ENSLBEG00000001154	htatsf1	98	60.659	Labrus_bergylta
ENSSHAG00000018908	-	97	63.205	ENSLACG00000015989	HTATSF1	97	63.205	Latimeria_chalumnae
ENSSHAG00000018908	-	82	47.423	ENSLOCG00000015118	htatsf1	79	46.736	Lepisosteus_oculatus
ENSSHAG00000018908	-	90	66.828	ENSLAFG00000014307	HTATSF1	60	66.828	Loxodonta_africana
ENSSHAG00000018908	-	91	66.667	ENSMFAG00000044705	HTATSF1	54	66.667	Macaca_fascicularis
ENSSHAG00000018908	-	91	66.425	ENSMMUG00000006450	HTATSF1	54	66.425	Macaca_mulatta
ENSSHAG00000018908	-	91	66.425	ENSMNEG00000024084	HTATSF1	60	66.425	Macaca_nemestrina
ENSSHAG00000018908	-	91	66.425	ENSMLEG00000035511	HTATSF1	54	66.425	Mandrillus_leucophaeus
ENSSHAG00000018908	-	89	63.702	ENSMAMG00000021225	htatsf1	98	60.352	Mastacembelus_armatus
ENSSHAG00000018908	-	88	63.462	ENSMZEG00005000485	htatsf1	99	59.355	Maylandia_zebra
ENSSHAG00000018908	-	90	71.496	ENSMGAG00000003558	HTATSF1	98	71.496	Meleagris_gallopavo
ENSSHAG00000018908	-	88	66.583	ENSMOCG00000022370	-	52	66.583	Microtus_ochrogaster
ENSSHAG00000018908	-	88	67.085	ENSMOCG00000023007	-	52	66.667	Microtus_ochrogaster
ENSSHAG00000018908	-	97	59.867	ENSMMOG00000011013	htatsf1	98	59.867	Mola_mola
ENSSHAG00000018908	-	97	80.182	ENSMODG00000014087	-	96	80.182	Monodelphis_domestica
ENSSHAG00000018908	-	55	94.758	ENSMODG00000000199	-	99	94.758	Monodelphis_domestica
ENSSHAG00000018908	-	98	57.419	ENSMALG00000019977	htatsf1	99	57.419	Monopterus_albus
ENSSHAG00000018908	-	88	67.595	ENSMLUG00000009234	-	54	67.595	Myotis_lucifugus
ENSSHAG00000018908	-	88	66.334	ENSMLUG00000028418	-	52	66.334	Myotis_lucifugus
ENSSHAG00000018908	-	78	70.538	ENSNGAG00000017831	Htatsf1	55	65.789	Nannospalax_galili
ENSSHAG00000018908	-	88	63.702	ENSNBRG00000003818	htatsf1	99	59.570	Neolamprologus_brichardi
ENSSHAG00000018908	-	90	66.341	ENSNLEG00000002746	HTATSF1	54	66.341	Nomascus_leucogenys
ENSSHAG00000018908	-	99	86.966	ENSMEUG00000004133	-	99	86.966	Notamacropus_eugenii
ENSSHAG00000018908	-	87	64.146	ENSONIG00000008638	htatsf1	98	60.131	Oreochromis_niloticus
ENSSHAG00000018908	-	88	78.713	ENSOANG00000011674	-	99	78.713	Ornithorhynchus_anatinus
ENSSHAG00000018908	-	98	59.267	ENSORLG00000002356	htatsf1	99	59.483	Oryzias_latipes
ENSSHAG00000018908	-	98	59.483	ENSORLG00020017818	htatsf1	96	59.483	Oryzias_latipes_hni
ENSSHAG00000018908	-	98	59.219	ENSORLG00015002268	htatsf1	99	59.436	Oryzias_latipes_hsok
ENSSHAG00000018908	-	98	58.190	ENSOMEG00000007564	htatsf1	99	58.190	Oryzias_melastigma
ENSSHAG00000018908	-	91	65.942	ENSPPAG00000024268	HTATSF1	54	65.942	Pan_paniscus
ENSSHAG00000018908	-	91	65.942	ENSPTRG00000044591	HTATSF1	54	65.942	Pan_troglodytes
ENSSHAG00000018908	-	97	62.416	ENSPKIG00000024852	htatsf1	98	62.416	Paramormyrops_kingsleyae
ENSSHAG00000018908	-	75	75.793	ENSPSIG00000010192	HTATSF1	98	75.793	Pelodiscus_sinensis
ENSSHAG00000018908	-	83	65.990	ENSPMGG00000006172	htatsf1	85	65.990	Periophthalmus_magnuspinnatus
ENSSHAG00000018908	-	93	96.659	ENSPCIG00000030173	-	96	96.659	Phascolarctos_cinereus
ENSSHAG00000018908	-	98	76.351	ENSPCIG00000018896	-	99	76.351	Phascolarctos_cinereus
ENSSHAG00000018908	-	98	59.389	ENSPFOG00000007871	htatsf1	96	59.389	Poecilia_formosa
ENSSHAG00000018908	-	98	60.044	ENSPLAG00000007532	htatsf1	99	60.044	Poecilia_latipinna
ENSSHAG00000018908	-	98	59.825	ENSPMEG00000000352	htatsf1	99	59.825	Poecilia_mexicana
ENSSHAG00000018908	-	98	59.914	ENSPREG00000007811	htatsf1	99	59.914	Poecilia_reticulata
ENSSHAG00000018908	-	91	65.942	ENSPPYG00000020765	HTATSF1	54	65.942	Pongo_abelii
ENSSHAG00000018908	-	87	61.323	ENSPCAG00000010576	HTATSF1	54	61.323	Procavia_capensis
ENSSHAG00000018908	-	87	67.939	ENSPCOG00000021823	HTATSF1	52	67.939	Propithecus_coquereli
ENSSHAG00000018908	-	87	67.857	ENSPVAG00000010281	HTATSF1	53	70.620	Pteropus_vampyrus
ENSSHAG00000018908	-	88	63.702	ENSPNYG00000016693	htatsf1	99	59.570	Pundamilia_nyererei
ENSSHAG00000018908	-	97	59.502	ENSPNAG00000006166	htatsf1	98	60.181	Pygocentrus_nattereri
ENSSHAG00000018908	-	91	66.425	ENSRROG00000021939	HTATSF1	54	66.425	Rhinopithecus_roxellana
ENSSHAG00000018908	-	90	66.585	ENSSBOG00000027186	-	54	66.585	Saimiri_boliviensis_boliviensis
ENSSHAG00000018908	-	87	67.684	ENSSBOG00000017914	-	52	67.684	Saimiri_boliviensis_boliviensis
ENSSHAG00000018908	-	88	66.332	ENSSFOG00015012002	htatsf1	88	65.375	Scleropages_formosus
ENSSHAG00000018908	-	83	66.753	ENSSMAG00000002970	htatsf1	99	58.734	Scophthalmus_maximus
ENSSHAG00000018908	-	79	64.096	ENSSDUG00000020002	htatsf1	85	63.978	Seriola_dumerili
ENSSHAG00000018908	-	87	62.136	ENSSLDG00000016880	htatsf1	98	58.134	Seriola_lalandi_dorsalis
ENSSHAG00000018908	-	82	67.935	ENSSARG00000005193	HTATSF1	50	67.935	Sorex_araneus
ENSSHAG00000018908	-	97	68.151	ENSSPUG00000014767	HTATSF1	97	68.151	Sphenodon_punctatus
ENSSHAG00000018908	-	98	57.627	ENSSPAG00000000732	htatsf1	99	58.190	Stegastes_partitus
ENSSHAG00000018908	-	79	70.704	ENSSSCG00000023062	HTATSF1	56	68.274	Sus_scrofa
ENSSHAG00000018908	-	91	71.294	ENSTGUG00000002099	HTATSF1	98	70.379	Taeniopygia_guttata
ENSSHAG00000018908	-	84	67.092	ENSTRUG00000013383	htatsf1	99	60.573	Takifugu_rubripes
ENSSHAG00000018908	-	97	61.135	ENSTNIG00000016140	htatsf1	98	61.135	Tetraodon_nigroviridis
ENSSHAG00000018908	-	76	70.435	ENSTTRG00000002269	HTATSF1	58	70.435	Tursiops_truncatus
ENSSHAG00000018908	-	98	64.889	ENSXETG00000019749	htatsf1	84	64.889	Xenopus_tropicalis
ENSSHAG00000018908	-	98	56.108	ENSXCOG00000006912	htatsf1	89	66.753	Xiphophorus_couchianus
ENSSHAG00000018908	-	98	61.384	ENSXMAG00000000490	htatsf1	99	61.384	Xiphophorus_maculatus