EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000000149 (Gene tree)
Gene ID
-
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding protein fox-1 homolog 3-like
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
189167 bases
Position
chrPEQF01098841.1:178075-367241
Accession
111656659
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000000098Fox-1_CPF12414.84.5e-4311
ENSSLDP00000000089Fox-1_CPF12414.85.1e-4311
ENSSLDP00000000104Fox-1_CPF12414.88.4e-4311
ENSSLDP00000000089RRM_1PF00076.221.6e-1811
ENSSLDP00000000104RRM_1PF00076.221.6e-1811
ENSSLDP00000000098RRM_1PF00076.222.4e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000000135-4305-ENSSLDP00000000098349 (aa)--
ENSSLDT00000000126-4359-ENSSLDP00000000089367 (aa)-UPI00025FA82E
ENSSLDT00000000141-4665XM_023408453ENSSLDP00000000104365 (aa)XP_023264221-
Gene Model
Click here to download ENSSLDG00000000149's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000149's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000000149rbfox3b10080.381ENSSLDG00000016098-9881.199
ENSSLDG00000000149rbfox3b7058.644ENSSLDG00000018052-8253.827
ENSSLDG00000000149rbfox3b8568.571ENSSLDG00000009353rbfox19267.577
ENSSLDG00000000149rbfox3b8156.452ENSSLDG00000022256rbfox1l9651.733
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000000149rbfox3b8180.000ENSG00000167281RBFOX310082.803Homo_sapiens
ENSSLDG00000000149rbfox3b10099.728ENSAPOG00000021630rbfox3b10099.726Acanthochromis_polyacanthus
ENSSLDG00000000149rbfox3b10070.380ENSAPOG00000015658-9170.652Acanthochromis_polyacanthus
ENSSLDG00000000149rbfox3b8976.232ENSAMEG00000014170RBFOX38877.810Ailuropoda_melanoleuca
ENSSLDG00000000149rbfox3b8595.513ENSACIG00000010817rbfox3b9995.513Amphilophus_citrinellus
ENSSLDG00000000149rbfox3b8470.552ENSACIG00000003768-9070.859Amphilophus_citrinellus
ENSSLDG00000000149rbfox3b10099.728ENSAOCG00000012358rbfox3b10099.728Amphiprion_ocellaris
ENSSLDG00000000149rbfox3b10080.109ENSAOCG00000010786-9780.926Amphiprion_ocellaris
ENSSLDG00000000149rbfox3b9273.889ENSAPEG00000015891-8974.722Amphiprion_percula
ENSSLDG00000000149rbfox3b10090.685ENSAPEG00000019081rbfox3b9990.685Amphiprion_percula
ENSSLDG00000000149rbfox3b8589.766ENSATEG00000019945rbfox3b9989.766Anabas_testudineus
ENSSLDG00000000149rbfox3b8179.333ENSATEG00000023101-9679.683Anabas_testudineus
ENSSLDG00000000149rbfox3b9880.501ENSACAG00000016093RBFOX39981.564Anolis_carolinensis
ENSSLDG00000000149rbfox3b8179.667ENSANAG00000023457RBFOX310082.484Aotus_nancymaae
ENSSLDG00000000149rbfox3b10082.016ENSACLG00000025552-10082.834Astatotilapia_calliptera
ENSSLDG00000000149rbfox3b10098.913ENSACLG00000020011rbfox3b10098.722Astatotilapia_calliptera
ENSSLDG00000000149rbfox3b9786.723ENSAMXG00000042841rbfox3b10086.158Astyanax_mexicanus
ENSSLDG00000000149rbfox3b10083.554ENSAMXG00000037246rbfox3a10085.215Astyanax_mexicanus
ENSSLDG00000000149rbfox3b6981.961ENSBTAG00000006280RBFOX310063.712Bos_taurus
ENSSLDG00000000149rbfox3b8174.916ENSCJAG00000009563RBFOX310072.022Callithrix_jacchus
ENSSLDG00000000149rbfox3b6584.583ENSCAFG00000005547RBFOX38587.448Canis_familiaris
ENSSLDG00000000149rbfox3b8168.208ENSCAFG00020008126RBFOX39671.745Canis_lupus_dingo
ENSSLDG00000000149rbfox3b8168.012ENSCHIG00000009124RBFOX39671.745Capra_hircus
ENSSLDG00000000149rbfox3b8168.588ENSTSYG00000029617RBFOX310072.376Carlito_syrichta
ENSSLDG00000000149rbfox3b8169.429ENSCPOG00000021703RBFOX310071.154Cavia_porcellus
ENSSLDG00000000149rbfox3b8179.667ENSCCAG00000028450RBFOX310082.484Cebus_capucinus
ENSSLDG00000000149rbfox3b8180.000ENSCATG00000018349RBFOX310082.803Cercocebus_atys
ENSSLDG00000000149rbfox3b8169.828ENSCLAG00000006449RBFOX310071.547Chinchilla_lanigera
ENSSLDG00000000149rbfox3b8180.000ENSCSAG00000002355RBFOX310082.803Chlorocebus_sabaeus
ENSSLDG00000000149rbfox3b8883.951ENSCPBG00000010904RBFOX310083.706Chrysemys_picta_bellii
ENSSLDG00000000149rbfox3b8180.000ENSCANG00000043120RBFOX310082.803Colobus_angolensis_palliatus
ENSSLDG00000000149rbfox3b8168.103ENSCGRG00001019476Rbfox310071.625Cricetulus_griseus_chok1gshd
ENSSLDG00000000149rbfox3b8168.103ENSCGRG00000003268Rbfox310071.625Cricetulus_griseus_crigri
ENSSLDG00000000149rbfox3b10080.654ENSCSEG00000015567RBFOX39781.471Cynoglossus_semilaevis
ENSSLDG00000000149rbfox3b10078.049ENSCSEG00000020606RBFOX310076.965Cynoglossus_semilaevis
ENSSLDG00000000149rbfox3b10099.728ENSCVAG00000006882rbfox3b10099.728Cyprinodon_variegatus
ENSSLDG00000000149rbfox3b10084.097ENSDARG00000010083rbfox3a10085.445Danio_rerio
ENSSLDG00000000149rbfox3b8578.914ENSDARG00000074310rbfox3b9680.392Danio_rerio
ENSSLDG00000000149rbfox3b7165.798ENSDNOG00000039391RBFOX39660.270Dasypus_novemcinctus
ENSSLDG00000000149rbfox3b8163.663ENSDORG00000005352Rbfox310063.231Dipodomys_ordii
ENSSLDG00000000149rbfox3b9764.420ENSEBUG00000002129RBFOX39569.027Eptatretus_burgeri
ENSSLDG00000000149rbfox3b7460.967ENSEBUG00000013559RBFOX38857.239Eptatretus_burgeri
ENSSLDG00000000149rbfox3b8180.132ENSEASG00005005059RBFOX310082.278Equus_asinus_asinus
ENSSLDG00000000149rbfox3b8179.801ENSECAG00000023811RBFOX310081.962Equus_caballus
ENSSLDG00000000149rbfox3b7276.056ENSEEUG00000013974RBFOX37286.885Erinaceus_europaeus
ENSSLDG00000000149rbfox3b10095.095ENSELUG00000017963rbfox3b10095.095Esox_lucius
ENSSLDG00000000149rbfox3b5263.776ENSELUG00000009807-6455.357Esox_lucius
ENSSLDG00000000149rbfox3b9879.722ENSFCAG00000002555RBFOX310081.847Felis_catus
ENSSLDG00000000149rbfox3b9068.132ENSFALG00000012288RBFOX38968.595Ficedula_albicollis
ENSSLDG00000000149rbfox3b8164.000ENSFDAG00000007489RBFOX310065.934Fukomys_damarensis
ENSSLDG00000000149rbfox3b8491.156ENSFHEG00000008550rbfox3b10091.156Fundulus_heteroclitus
ENSSLDG00000000149rbfox3b8567.778ENSGMOG00000019304-9668.611Gadus_morhua
ENSSLDG00000000149rbfox3b9882.402ENSGALG00000032889RBFOX39984.314Gallus_gallus
ENSSLDG00000000149rbfox3b10092.916ENSGAFG00000005025rbfox3b10092.916Gambusia_affinis
ENSSLDG00000000149rbfox3b8170.774ENSGACG00000002138-9671.703Gasterosteus_aculeatus
ENSSLDG00000000149rbfox3b9884.034ENSGAGG00000020025RBFOX310083.706Gopherus_agassizii
ENSSLDG00000000149rbfox3b8180.000ENSGGOG00000012546RBFOX310082.803Gorilla_gorilla
ENSSLDG00000000149rbfox3b9081.325ENSHBUG00000023098-9582.229Haplochromis_burtoni
ENSSLDG00000000149rbfox3b10099.183ENSHBUG00000018099rbfox3b10099.183Haplochromis_burtoni
ENSSLDG00000000149rbfox3b8168.750ENSHGLG00000008679RBFOX310070.219Heterocephalus_glaber_female
ENSSLDG00000000149rbfox3b8165.625ENSHGLG00100014739RBFOX39667.213Heterocephalus_glaber_male
ENSSLDG00000000149rbfox3b8574.359ENSHCOG00000001863RBFOX39275.159Hippocampus_comes
ENSSLDG00000000149rbfox3b9880.055ENSHCOG00000007444RBFOX39381.644Hippocampus_comes
ENSSLDG00000000149rbfox3b8573.547ENSIPUG00000021966rbfox3b9885.606Ictalurus_punctatus
ENSSLDG00000000149rbfox3b10082.210ENSIPUG00000012010rbfox3a10084.097Ictalurus_punctatus
ENSSLDG00000000149rbfox3b8163.816ENSSTOG00000026817RBFOX310065.938Ictidomys_tridecemlineatus
ENSSLDG00000000149rbfox3b8167.435ENSJJAG00000014167Rbfox310071.745Jaculus_jaculus
ENSSLDG00000000149rbfox3b10099.728ENSKMAG00000006726rbfox3b10099.728Kryptolebias_marmoratus
ENSSLDG00000000149rbfox3b10086.104ENSLBEG00000022508-10086.104Labrus_bergylta
ENSSLDG00000000149rbfox3b10099.726ENSLBEG00000004030rbfox3b10099.726Labrus_bergylta
ENSSLDG00000000149rbfox3b8871.549ENSLACG00000018409-9072.958Latimeria_chalumnae
ENSSLDG00000000149rbfox3b8888.650ENSLOCG00000012267rbfox3a9890.491Lepisosteus_oculatus
ENSSLDG00000000149rbfox3b8973.876ENSLAFG00000016623RBFOX39671.468Loxodonta_africana
ENSSLDG00000000149rbfox3b8168.497ENSMFAG00000002247RBFOX310072.299Macaca_fascicularis
ENSSLDG00000000149rbfox3b8180.000ENSMMUG00000023028RBFOX310082.803Macaca_mulatta
ENSSLDG00000000149rbfox3b8179.667ENSMNEG00000041147RBFOX310082.484Macaca_nemestrina
ENSSLDG00000000149rbfox3b8180.000ENSMLEG00000025686RBFOX310082.803Mandrillus_leucophaeus
ENSSLDG00000000149rbfox3b8588.782ENSMAMG00000019810rbfox3b9987.821Mastacembelus_armatus
ENSSLDG00000000149rbfox3b8980.061ENSMAMG00000020600-9380.000Mastacembelus_armatus
ENSSLDG00000000149rbfox3b8362.798ENSMZEG00005003055-8162.798Maylandia_zebra
ENSSLDG00000000149rbfox3b10099.183ENSMZEG00005000781rbfox3b10099.178Maylandia_zebra
ENSSLDG00000000149rbfox3b6080.909ENSMGAG00000005600RBFOX38381.279Meleagris_gallopavo
ENSSLDG00000000149rbfox3b8169.452ENSMAUG00000013543Rbfox310070.248Mesocricetus_auratus
ENSSLDG00000000149rbfox3b8881.481ENSMICG00000014898RBFOX310081.789Microcebus_murinus
ENSSLDG00000000149rbfox3b8167.147ENSMOCG00000015373Rbfox310070.718Microtus_ochrogaster
ENSSLDG00000000149rbfox3b10097.561ENSMMOG00000020193rbfox3b10097.561Mola_mola
ENSSLDG00000000149rbfox3b9880.501ENSMODG00000002089RBFOX39982.402Monodelphis_domestica
ENSSLDG00000000149rbfox3b10098.093ENSMALG00000020407rbfox3b10098.093Monopterus_albus
ENSSLDG00000000149rbfox3b10083.651ENSMALG00000018270-10084.469Monopterus_albus
ENSSLDG00000000149rbfox3b8178.667MGP_CAROLIEiJ_G0017487Rbfox39689.209Mus_caroli
ENSSLDG00000000149rbfox3b8180.399ENSMUSG00000025576Rbfox39689.209Mus_musculus
ENSSLDG00000000149rbfox3b8179.402MGP_PahariEiJ_G0018614Rbfox39689.928Mus_pahari
ENSSLDG00000000149rbfox3b8179.000MGP_SPRETEiJ_G0018331Rbfox39689.209Mus_spretus
ENSSLDG00000000149rbfox3b8972.055ENSMPUG00000012319RBFOX39573.497Mustela_putorius_furo
ENSSLDG00000000149rbfox3b8168.103ENSNGAG00000018006Rbfox310071.823Nannospalax_galili
ENSSLDG00000000149rbfox3b9075.758ENSNBRG00000022885-9175.602Neolamprologus_brichardi
ENSSLDG00000000149rbfox3b10098.093ENSNBRG00000010102rbfox3b10098.093Neolamprologus_brichardi
ENSSLDG00000000149rbfox3b8556.051ENSNLEG00000000153-9556.230Nomascus_leucogenys
ENSSLDG00000000149rbfox3b7985.106ENSMEUG00000004218-10054.167Notamacropus_eugenii
ENSSLDG00000000149rbfox3b6880.000ENSOPRG00000016279-7181.667Ochotona_princeps
ENSSLDG00000000149rbfox3b8181.728ENSODEG00000009433RBFOX310082.222Octodon_degus
ENSSLDG00000000149rbfox3b9279.941ENSONIG00000007282-9980.826Oreochromis_niloticus
ENSSLDG00000000149rbfox3b100100.000ENSONIG00000009549rbfox3b100100.000Oreochromis_niloticus
ENSSLDG00000000149rbfox3b6960.403ENSOCUG00000014217RBFOX37762.989Oryctolagus_cuniculus
ENSSLDG00000000149rbfox3b10098.910ENSORLG00000000905rbfox3b7998.356Oryzias_latipes
ENSSLDG00000000149rbfox3b10098.910ENSORLG00020018030rbfox3b9998.356Oryzias_latipes_hni
ENSSLDG00000000149rbfox3b10099.183ENSORLG00015009200rbfox3b10099.183Oryzias_latipes_hsok
ENSSLDG00000000149rbfox3b8593.009ENSOMEG00000014677rbfox3b8693.009Oryzias_melastigma
ENSSLDG00000000149rbfox3b8979.573ENSOGAG00000029595RBFOX38781.707Otolemur_garnettii
ENSSLDG00000000149rbfox3b8859.026ENSOARG00000002908RBFOX38959.829Ovis_aries
ENSSLDG00000000149rbfox3b6981.961ENSPPAG00000025383RBFOX39981.882Pan_paniscus
ENSSLDG00000000149rbfox3b8167.647ENSPPRG00000007819RBFOX310072.394Panthera_pardus
ENSSLDG00000000149rbfox3b8180.000ENSPTRG00000009727RBFOX310082.803Pan_troglodytes
ENSSLDG00000000149rbfox3b8180.000ENSPANG00000019837RBFOX310082.803Papio_anubis
ENSSLDG00000000149rbfox3b10088.235ENSPKIG00000010299rbfox3a9988.439Paramormyrops_kingsleyae
ENSSLDG00000000149rbfox3b9071.951ENSPKIG00000022633-9668.421Paramormyrops_kingsleyae
ENSSLDG00000000149rbfox3b8791.975ENSPMGG00000008000rbfox3b10092.260Periophthalmus_magnuspinnatus
ENSSLDG00000000149rbfox3b8167.723ENSPEMG00000010500Rbfox310071.271Peromyscus_maniculatus_bairdii
ENSSLDG00000000149rbfox3b5075.132ENSPMAG00000008689rbfox3b9376.842Petromyzon_marinus
ENSSLDG00000000149rbfox3b9871.675ENSPCIG00000005766RBFOX310073.559Phascolarctos_cinereus
ENSSLDG00000000149rbfox3b10099.728ENSPFOG00000018294rbfox3b9699.728Poecilia_formosa
ENSSLDG00000000149rbfox3b6594.142ENSPLAG00000000481rbfox3b7394.118Poecilia_latipinna
ENSSLDG00000000149rbfox3b8490.816ENSPMEG00000022997rbfox3b10090.816Poecilia_mexicana
ENSSLDG00000000149rbfox3b10099.728ENSPREG00000012886rbfox3b9999.728Poecilia_reticulata
ENSSLDG00000000149rbfox3b7775.532ENSPPYG00000008704RBFOX38875.251Pongo_abelii
ENSSLDG00000000149rbfox3b8165.607ENSPCAG00000001401RBFOX310065.097Procavia_capensis
ENSSLDG00000000149rbfox3b8568.698ENSPCOG00000012689RBFOX310071.468Propithecus_coquereli
ENSSLDG00000000149rbfox3b8159.366ENSPVAG00000015243RBFOX310063.812Pteropus_vampyrus
ENSSLDG00000000149rbfox3b10086.921ENSPNYG00000010414rbfox3b9986.921Pundamilia_nyererei
ENSSLDG00000000149rbfox3b10077.534ENSPNYG00000009079-9677.384Pundamilia_nyererei
ENSSLDG00000000149rbfox3b8570.833ENSPNAG00000018173rbfox3b9070.833Pygocentrus_nattereri
ENSSLDG00000000149rbfox3b10083.820ENSPNAG00000002889rbfox3a10085.484Pygocentrus_nattereri
ENSSLDG00000000149rbfox3b8179.402ENSRNOG00000003386Rbfox310081.962Rattus_norvegicus
ENSSLDG00000000149rbfox3b9880.000ENSRBIG00000040449RBFOX39981.894Rhinopithecus_bieti
ENSSLDG00000000149rbfox3b8180.000ENSRROG00000000766RBFOX310082.803Rhinopithecus_roxellana
ENSSLDG00000000149rbfox3b8179.667ENSSBOG00000031591RBFOX310082.484Saimiri_boliviensis_boliviensis
ENSSLDG00000000149rbfox3b8974.581ENSSHAG00000016076RBFOX310073.559Sarcophilus_harrisii
ENSSLDG00000000149rbfox3b9873.464ENSSFOG00015004716RBFOX39972.652Scleropages_formosus
ENSSLDG00000000149rbfox3b10086.631ENSSFOG00015023260rbfox3a10087.968Scleropages_formosus
ENSSLDG00000000149rbfox3b10082.289ENSSMAG00000019052-10082.803Scophthalmus_maximus
ENSSLDG00000000149rbfox3b10095.312ENSSMAG00000012618rbfox3b8795.312Scophthalmus_maximus
ENSSLDG00000000149rbfox3b10077.112ENSSDUG00000015801-9877.929Seriola_dumerili
ENSSLDG00000000149rbfox3b8491.156ENSSDUG00000023183rbfox3b10091.156Seriola_dumerili
ENSSLDG00000000149rbfox3b9874.930ENSSPUG00000011733RBFOX39983.706Sphenodon_punctatus
ENSSLDG00000000149rbfox3b10091.233ENSSPAG00000017571rbfox3b9991.233Stegastes_partitus
ENSSLDG00000000149rbfox3b7477.574ENSSPAG00000004898-8578.049Stegastes_partitus
ENSSLDG00000000149rbfox3b7480.882ENSSSCG00000039498RBFOX39670.755Sus_scrofa
ENSSLDG00000000149rbfox3b8989.552ENSTRUG00000004894rbfox3b9389.790Takifugu_rubripes
ENSSLDG00000000149rbfox3b9088.056ENSTNIG00000011278rbfox3b9088.056Tetraodon_nigroviridis
ENSSLDG00000000149rbfox3b7448.101ENSTBEG00000004296-8951.964Tupaia_belangeri
ENSSLDG00000000149rbfox3b8162.717ENSTTRG00000003676RBFOX310066.759Tursiops_truncatus
ENSSLDG00000000149rbfox3b8180.000ENSUAMG00000004668RBFOX310082.803Ursus_americanus
ENSSLDG00000000149rbfox3b9880.278ENSVVUG00000017864RBFOX310082.484Vulpes_vulpes
ENSSLDG00000000149rbfox3b8966.954ENSXETG00000020236rbfox38867.147Xenopus_tropicalis
ENSSLDG00000000149rbfox3b9898.338ENSXCOG00000018262rbfox3b10098.338Xiphophorus_couchianus
ENSSLDG00000000149rbfox3b100100.000ENSXMAG00000012939rbfox3b100100.000Xiphophorus_maculatus

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