EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000000387 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: elongation factor G-2%2C chloroplastic-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2028 bases
Position: chrPEQF01001940.1:52-2079
Accession: 111652280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000000399	GTP_EFTU	PF00009.27	2.9e-36	1	1
ENSSLDP00000000399	GTP_EFTU_D2	PF03144.25	4.4e-15	1	1
ENSSLDP00000000399	EFG_IV	PF03764.18	1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000000443	-	1938	XM_023402539	ENSSLDP00000000399	646 (aa)	XP_023258307	-

Gene Model

Click here to download ENSSLDG00000000387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000000387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000000387	-	74	55.556	ENSSLDG00000009720	-	63	55.556
ENSSLDG00000000387	-	96	39.637	ENSSLDG00000014952	gfm2	88	39.171
ENSSLDG00000000387	-	96	40.960	ENSSLDG00000020606	gfm1	83	40.960

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000000387	-	86	52.511	ENSG00000164347	GFM2	83	38.333	Homo_sapiens
ENSSLDG00000000387	-	96	38.520	ENSAPOG00000005965	gfm2	84	38.520	Acanthochromis_polyacanthus
ENSSLDG00000000387	-	96	37.805	ENSAMEG00000000544	GFM2	82	37.957	Ailuropoda_melanoleuca
ENSSLDG00000000387	-	96	37.778	ENSACIG00000003338	gfm2	91	37.778	Amphilophus_citrinellus
ENSSLDG00000000387	-	96	38.520	ENSAOCG00000014342	gfm2	84	38.520	Amphiprion_ocellaris
ENSSLDG00000000387	-	96	38.333	ENSAPEG00000000424	gfm2	84	38.333	Amphiprion_percula
ENSSLDG00000000387	-	96	38.695	ENSATEG00000010821	gfm2	89	38.392	Anabas_testudineus
ENSSLDG00000000387	-	96	39.032	ENSAPLG00000007221	GFM2	83	38.671	Anas_platyrhynchos
ENSSLDG00000000387	-	96	40.668	ENSACAG00000009011	GFM2	83	40.668	Anolis_carolinensis
ENSSLDG00000000387	-	74	41.192	ENSANAG00000027737	GFM2	79	52.055	Aotus_nancymaae
ENSSLDG00000000387	-	96	37.973	ENSACLG00000027430	gfm2	87	37.973	Astatotilapia_calliptera
ENSSLDG00000000387	-	96	39.124	ENSAMXG00000009979	gfm2	84	39.124	Astyanax_mexicanus
ENSSLDG00000000387	-	96	38.298	ENSBTAG00000015519	GFM2	88	38.450	Bos_taurus
ENSSLDG00000000387	-	86	52.055	ENSCJAG00000016802	GFM2	82	38.754	Callithrix_jacchus
ENSSLDG00000000387	-	96	38.508	ENSCAFG00000008298	GFM2	82	38.392	Canis_familiaris
ENSSLDG00000000387	-	96	38.508	ENSCAFG00020016998	GFM2	85	38.392	Canis_lupus_dingo
ENSSLDG00000000387	-	96	38.450	ENSCHIG00000012765	GFM2	83	38.602	Capra_hircus
ENSSLDG00000000387	-	54	42.368	ENSTSYG00000011664	GFM2	72	42.147	Carlito_syrichta
ENSSLDG00000000387	-	86	52.511	ENSCPOG00000006332	GFM2	84	38.298	Cavia_porcellus
ENSSLDG00000000387	-	86	52.055	ENSCCAG00000029580	GFM2	82	38.602	Cebus_capucinus
ENSSLDG00000000387	-	86	52.968	ENSCATG00000036394	GFM2	82	38.788	Cercocebus_atys
ENSSLDG00000000387	-	96	37.842	ENSCLAG00000013440	GFM2	83	37.842	Chinchilla_lanigera
ENSSLDG00000000387	-	96	38.298	ENSCSAG00000015464	GFM2	82	38.450	Chlorocebus_sabaeus
ENSSLDG00000000387	-	79	41.162	ENSCHOG00000002245	GFM2	68	41.404	Choloepus_hoffmanni
ENSSLDG00000000387	-	96	38.404	ENSCPBG00000000761	GFM2	85	38.404	Chrysemys_picta_bellii
ENSSLDG00000000387	-	94	35.549	ENSCING00000003377	-	85	35.549	Ciona_intestinalis
ENSSLDG00000000387	-	97	36.322	ENSCSAVG00000002108	-	88	39.005	Ciona_savignyi
ENSSLDG00000000387	-	86	51.598	ENSCANG00000042500	GFM2	82	38.146	Colobus_angolensis_palliatus
ENSSLDG00000000387	-	96	37.768	ENSCGRG00001022802	Gfm2	82	37.920	Cricetulus_griseus_chok1gshd
ENSSLDG00000000387	-	96	37.768	ENSCGRG00000001439	Gfm2	82	37.920	Cricetulus_griseus_crigri
ENSSLDG00000000387	-	96	39.032	ENSCSEG00000013115	gfm2	85	38.729	Cynoglossus_semilaevis
ENSSLDG00000000387	-	86	50.000	ENSCVAG00000010057	gfm2	87	36.850	Cyprinodon_variegatus
ENSSLDG00000000387	-	96	38.813	ENSDARG00000005561	gfm2	84	38.813	Danio_rerio
ENSSLDG00000000387	-	96	37.026	ENSDNOG00000005118	GFM2	82	37.026	Dasypus_novemcinctus
ENSSLDG00000000387	-	96	38.543	ENSDORG00000016231	Gfm2	83	38.450	Dipodomys_ordii
ENSSLDG00000000387	-	93	31.895	FBgn0051159	mRRF2	81	35.356	Drosophila_melanogaster
ENSSLDG00000000387	-	69	41.207	ENSETEG00000004090	GFM2	60	41.207	Echinops_telfairi
ENSSLDG00000000387	-	85	67.033	ENSEBUG00000012181	gfm2	84	67.033	Eptatretus_burgeri
ENSSLDG00000000387	-	71	75.714	ENSEASG00005018285	GFM2	72	74.324	Equus_asinus_asinus
ENSSLDG00000000387	-	95	37.750	ENSECAG00000006640	GFM2	86	37.750	Equus_caballus
ENSSLDG00000000387	-	89	35.897	ENSEEUG00000004656	GFM2	75	35.897	Erinaceus_europaeus
ENSSLDG00000000387	-	96	38.182	ENSELUG00000003075	gfm2	84	38.182	Esox_lucius
ENSSLDG00000000387	-	86	52.511	ENSFCAG00000011977	GFM2	82	37.957	Felis_catus
ENSSLDG00000000387	-	97	38.160	ENSFALG00000010106	GFM2	83	38.311	Ficedula_albicollis
ENSSLDG00000000387	-	96	33.790	ENSFDAG00000004993	GFM2	82	33.790	Fukomys_damarensis
ENSSLDG00000000387	-	96	39.787	ENSFHEG00000006210	gfm2	84	39.787	Fundulus_heteroclitus
ENSSLDG00000000387	-	96	39.571	ENSGMOG00000003177	gfm2	84	39.571	Gadus_morhua
ENSSLDG00000000387	-	96	38.729	ENSGALG00000014939	GFM2	83	38.485	Gallus_gallus
ENSSLDG00000000387	-	96	39.848	ENSGAFG00000000439	gfm2	84	39.848	Gambusia_affinis
ENSSLDG00000000387	-	96	39.183	ENSGACG00000015889	gfm2	89	38.710	Gasterosteus_aculeatus
ENSSLDG00000000387	-	96	38.554	ENSGAGG00000012347	GFM2	83	38.554	Gopherus_agassizii
ENSSLDG00000000387	-	80	52.511	ENSGGOG00000013739	GFM2	81	38.511	Gorilla_gorilla
ENSSLDG00000000387	-	96	38.427	ENSHBUG00000011021	gfm2	86	36.309	Haplochromis_burtoni
ENSSLDG00000000387	-	96	38.520	ENSHGLG00000000419	GFM2	89	38.520	Heterocephalus_glaber_female
ENSSLDG00000000387	-	96	38.520	ENSHGLG00100018383	GFM2	89	38.520	Heterocephalus_glaber_male
ENSSLDG00000000387	-	96	36.744	ENSHCOG00000008208	gfm2	88	34.277	Hippocampus_comes
ENSSLDG00000000387	-	96	38.543	ENSIPUG00000024153	gfm2	85	38.543	Ictalurus_punctatus
ENSSLDG00000000387	-	96	37.805	ENSSTOG00000007931	GFM2	82	38.049	Ictidomys_tridecemlineatus
ENSSLDG00000000387	-	96	38.626	ENSJJAG00000024278	Gfm2	82	38.626	Jaculus_jaculus
ENSSLDG00000000387	-	96	38.906	ENSKMAG00000013277	gfm2	84	38.602	Kryptolebias_marmoratus
ENSSLDG00000000387	-	96	38.914	ENSLBEG00000020327	gfm2	84	38.914	Labrus_bergylta
ENSSLDG00000000387	-	96	38.906	ENSLACG00000004622	GFM2	82	38.906	Latimeria_chalumnae
ENSSLDG00000000387	-	93	39.097	ENSLOCG00000005368	gfm2	83	39.252	Lepisosteus_oculatus
ENSSLDG00000000387	-	96	37.538	ENSLAFG00000018575	GFM2	82	37.690	Loxodonta_africana
ENSSLDG00000000387	-	86	52.055	ENSMFAG00000039713	GFM2	82	38.333	Macaca_fascicularis
ENSSLDG00000000387	-	86	52.055	ENSMMUG00000019998	GFM2	85	38.485	Macaca_mulatta
ENSSLDG00000000387	-	86	51.598	ENSMNEG00000034666	GFM2	82	38.333	Macaca_nemestrina
ENSSLDG00000000387	-	86	51.598	ENSMLEG00000038075	GFM2	82	38.333	Mandrillus_leucophaeus
ENSSLDG00000000387	-	96	39.150	ENSMAMG00000000452	gfm2	89	38.190	Mastacembelus_armatus
ENSSLDG00000000387	-	96	38.427	ENSMZEG00005004469	gfm2	86	38.124	Maylandia_zebra
ENSSLDG00000000387	-	96	35.909	ENSMGAG00000015100	GFM2	82	35.909	Meleagris_gallopavo
ENSSLDG00000000387	-	96	37.846	ENSMAUG00000022103	Gfm2	82	38.000	Mesocricetus_auratus
ENSSLDG00000000387	-	96	38.088	ENSMICG00000000749	GFM2	82	38.088	Microcebus_murinus
ENSSLDG00000000387	-	96	37.863	ENSMOCG00000004402	-	82	38.015	Microtus_ochrogaster
ENSSLDG00000000387	-	58	40.640	ENSMOCG00000019032	-	74	40.887	Microtus_ochrogaster
ENSSLDG00000000387	-	96	39.032	ENSMMOG00000004758	gfm2	90	38.578	Mola_mola
ENSSLDG00000000387	-	96	38.636	ENSMODG00000001892	GFM2	83	38.636	Monodelphis_domestica
ENSSLDG00000000387	-	96	37.519	ENSMALG00000010323	gfm2	84	37.519	Monopterus_albus
ENSSLDG00000000387	-	96	37.462	MGP_CAROLIEiJ_G0018814	Gfm2	82	37.462	Mus_caroli
ENSSLDG00000000387	-	96	37.615	ENSMUSG00000021666	Gfm2	82	37.615	Mus_musculus
ENSSLDG00000000387	-	96	38.168	MGP_PahariEiJ_G0015889	Gfm2	82	38.168	Mus_pahari
ENSSLDG00000000387	-	96	37.615	MGP_SPRETEiJ_G0019696	Gfm2	82	37.615	Mus_spretus
ENSSLDG00000000387	-	96	34.604	ENSMPUG00000005688	GFM2	91	34.756	Mustela_putorius_furo
ENSSLDG00000000387	-	96	38.146	ENSMLUG00000004761	GFM2	82	38.146	Myotis_lucifugus
ENSSLDG00000000387	-	96	37.386	ENSNGAG00000013586	Gfm2	83	37.386	Nannospalax_galili
ENSSLDG00000000387	-	96	37.821	ENSNBRG00000009181	gfm2	86	37.821	Neolamprologus_brichardi
ENSSLDG00000000387	-	86	52.511	ENSNLEG00000004979	GFM2	82	38.110	Nomascus_leucogenys
ENSSLDG00000000387	-	71	55.479	ENSMEUG00000007885	-	60	55.479	Notamacropus_eugenii
ENSSLDG00000000387	-	83	57.325	ENSOPRG00000001846	GFM2	73	57.325	Ochotona_princeps
ENSSLDG00000000387	-	96	38.508	ENSODEG00000002193	GFM2	88	38.022	Octodon_degus
ENSSLDG00000000387	-	96	38.275	ENSONIG00000011183	gfm2	84	38.275	Oreochromis_niloticus
ENSSLDG00000000387	-	96	39.183	ENSOANG00000015776	GFM2	83	39.183	Ornithorhynchus_anatinus
ENSSLDG00000000387	-	96	38.473	ENSOCUG00000005349	GFM2	84	38.356	Oryctolagus_cuniculus
ENSSLDG00000000387	-	96	38.262	ENSORLG00000003360	gfm2	85	38.110	Oryzias_latipes
ENSSLDG00000000387	-	96	38.110	ENSORLG00020011110	gfm2	92	37.957	Oryzias_latipes_hni
ENSSLDG00000000387	-	96	38.110	ENSORLG00015018196	gfm2	92	37.957	Oryzias_latipes_hsok
ENSSLDG00000000387	-	96	38.636	ENSOMEG00000013774	gfm2	85	38.636	Oryzias_melastigma
ENSSLDG00000000387	-	96	37.842	ENSOGAG00000008961	GFM2	82	37.842	Otolemur_garnettii
ENSSLDG00000000387	-	96	38.450	ENSOARG00000004491	GFM2	82	38.602	Ovis_aries
ENSSLDG00000000387	-	86	52.511	ENSPPAG00000036359	GFM2	82	38.415	Pan_paniscus
ENSSLDG00000000387	-	85	52.511	ENSPPRG00000002671	GFM2	82	37.979	Panthera_pardus
ENSSLDG00000000387	-	86	52.511	ENSPTIG00000021698	GFM2	82	37.957	Panthera_tigris_altaica
ENSSLDG00000000387	-	86	52.511	ENSPTRG00000016989	GFM2	82	38.415	Pan_troglodytes
ENSSLDG00000000387	-	86	52.055	ENSPANG00000013600	GFM2	82	38.485	Papio_anubis
ENSSLDG00000000387	-	97	38.695	ENSPKIG00000018878	gfm2	87	38.695	Paramormyrops_kingsleyae
ENSSLDG00000000387	-	97	39.462	ENSPSIG00000012954	GFM2	85	39.462	Pelodiscus_sinensis
ENSSLDG00000000387	-	96	37.727	ENSPMGG00000016783	gfm2	87	37.727	Periophthalmus_magnuspinnatus
ENSSLDG00000000387	-	96	37.405	ENSPEMG00000000622	Gfm2	82	37.405	Peromyscus_maniculatus_bairdii
ENSSLDG00000000387	-	96	37.426	ENSPMAG00000000472	gfm2	95	37.278	Petromyzon_marinus
ENSSLDG00000000387	-	72	31.800	ENSPCIG00000020810	-	82	31.800	Phascolarctos_cinereus
ENSSLDG00000000387	-	96	40.000	ENSPFOG00000012381	gfm2	84	40.000	Poecilia_formosa
ENSSLDG00000000387	-	86	51.802	ENSPLAG00000014750	gfm2	86	38.898	Poecilia_latipinna
ENSSLDG00000000387	-	96	39.697	ENSPMEG00000005813	gfm2	92	39.697	Poecilia_mexicana
ENSSLDG00000000387	-	96	39.394	ENSPREG00000021026	gfm2	85	38.779	Poecilia_reticulata
ENSSLDG00000000387	-	96	38.415	ENSPPYG00000015556	GFM2	81	38.415	Pongo_abelii
ENSSLDG00000000387	-	90	44.828	ENSPCAG00000015284	GFM2	74	44.828	Procavia_capensis
ENSSLDG00000000387	-	96	38.146	ENSPCOG00000022606	GFM2	80	51.598	Propithecus_coquereli
ENSSLDG00000000387	-	96	37.994	ENSPVAG00000005391	GFM2	83	37.994	Pteropus_vampyrus
ENSSLDG00000000387	-	96	38.124	ENSPNYG00000001950	gfm2	86	37.821	Pundamilia_nyererei
ENSSLDG00000000387	-	96	38.218	ENSPNAG00000018467	gfm2	84	38.218	Pygocentrus_nattereri
ENSSLDG00000000387	-	96	38.813	ENSRNOG00000025285	Gfm2	82	38.813	Rattus_norvegicus
ENSSLDG00000000387	-	86	52.055	ENSRBIG00000040962	GFM2	82	38.450	Rhinopithecus_bieti
ENSSLDG00000000387	-	86	52.511	ENSRROG00000036459	GFM2	82	38.450	Rhinopithecus_roxellana
ENSSLDG00000000387	-	86	52.055	ENSSBOG00000021848	GFM2	82	38.906	Saimiri_boliviensis_boliviensis
ENSSLDG00000000387	-	96	38.520	ENSSHAG00000017593	GFM2	83	38.427	Sarcophilus_harrisii
ENSSLDG00000000387	-	96	38.124	ENSSFOG00015016059	gfm2	89	37.462	Scleropages_formosus
ENSSLDG00000000387	-	96	38.998	ENSSMAG00000010773	gfm2	87	38.998	Scophthalmus_maximus
ENSSLDG00000000387	-	96	39.334	ENSSDUG00000021273	gfm2	88	39.334	Seriola_dumerili
ENSSLDG00000000387	-	68	51.376	ENSSARG00000009381	GFM2	58	51.376	Sorex_araneus
ENSSLDG00000000387	-	96	32.929	ENSSPUG00000000593	GFM2	80	32.929	Sphenodon_punctatus
ENSSLDG00000000387	-	96	38.589	ENSSPAG00000014163	gfm2	87	37.423	Stegastes_partitus
ENSSLDG00000000387	-	96	38.602	ENSSSCG00000014074	GFM2	83	38.754	Sus_scrofa
ENSSLDG00000000387	-	96	38.333	ENSTGUG00000005985	GFM2	83	38.333	Taeniopygia_guttata
ENSSLDG00000000387	-	96	38.647	ENSTRUG00000018513	gfm2	85	38.647	Takifugu_rubripes
ENSSLDG00000000387	-	96	34.802	ENSTNIG00000013438	gfm2	88	34.802	Tetraodon_nigroviridis
ENSSLDG00000000387	-	90	38.772	ENSTBEG00000012713	GFM2	82	38.772	Tupaia_belangeri
ENSSLDG00000000387	-	96	37.481	ENSTTRG00000005188	GFM2	83	37.481	Tursiops_truncatus
ENSSLDG00000000387	-	96	37.805	ENSUMAG00000007328	GFM2	82	37.842	Ursus_maritimus
ENSSLDG00000000387	-	62	43.478	ENSVPAG00000007367	GFM2	54	43.280	Vicugna_pacos
ENSSLDG00000000387	-	96	38.508	ENSVVUG00000009245	GFM2	82	38.392	Vulpes_vulpes
ENSSLDG00000000387	-	96	35.886	ENSXETG00000005076	gfm2	90	35.886	Xenopus_tropicalis
ENSSLDG00000000387	-	96	39.697	ENSXCOG00000015007	gfm2	88	39.697	Xiphophorus_couchianus
ENSSLDG00000000387	-	96	39.697	ENSXMAG00000000772	gfm2	85	39.697	Xiphophorus_maculatus